RNA–Protein interactions for RNA: ENST00000507056.1

LINC01259-201, Transcript of long intergenic non-protein coding RNA 1259, humanhuman

TSL 3 BASIC

Gene LINC01259, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01259-201ENST00000507056 MAGI3Q5TCQ9 1506 aa16.48■□□□□ 0.23
LINC01259-201ENST00000507056 ARID3CA6NKF2 412 aa16.46■□□□□ 0.23
LINC01259-201ENST00000507056 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
LINC01259-201ENST00000507056 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
LINC01259-201ENST00000507056 HECW2Q9P2P5 1572 aa16.45■□□□□ 0.22
LINC01259-201ENST00000507056 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
LINC01259-201ENST00000507056 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
LINC01259-201ENST00000507056 ATP10BO94823 1461 aa16.4■□□□□ 0.22
LINC01259-201ENST00000507056 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
LINC01259-201ENST00000507056 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
LINC01259-201ENST00000507056 SPOCK2Q92563 424 aa16.36■□□□□ 0.21
LINC01259-201ENST00000507056 ARAP3Q8WWN8 1544 aa16.35■□□□□ 0.21
LINC01259-201ENST00000507056 KIF21BO75037 1637 aa16.35■□□□□ 0.21
LINC01259-201ENST00000507056 RAPGEF3O95398 923 aa16.33■□□□□ 0.2
LINC01259-201ENST00000507056 PAXIP1Q6ZW49 1069 aaPredicted RBP16.33■□□□□ 0.2
LINC01259-201ENST00000507056 ECM2O94769 699 aaPredicted RBP16.32■□□□□ 0.2
LINC01259-201ENST00000507056 RANGAP1P46060 587 aaPredicted RBP16.3■□□□□ 0.2
LINC01259-201ENST00000507056 POLA2Q14181 598 aa16.3■□□□□ 0.2
LINC01259-201ENST00000507056 ABCA9Q8IUA7 1624 aa16.3■□□□□ 0.2
LINC01259-201ENST00000507056 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
LINC01259-201ENST00000507056 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
LINC01259-201ENST00000507056 SAMD9Q5K651 1589 aa16.27■□□□□ 0.2
LINC01259-201ENST00000507056 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.19
LINC01259-201ENST00000507056 CFAP44Q96MT7 982 aa16.26■□□□□ 0.19
LINC01259-201ENST00000507056 PTPRMP28827 1452 aa16.24■□□□□ 0.19
LINC01259-201ENST00000507056 NEO1Q92859 1461 aa16.23■□□□□ 0.19
LINC01259-201ENST00000507056 ADAMTSL3P82987 1691 aa16.23■□□□□ 0.19
LINC01259-201ENST00000507056 NUP153P49790 1475 aaKnown RBP16.22■□□□□ 0.19
LINC01259-201ENST00000507056 ARID4BQ4LE39 1312 aaPredicted RBP16.22■□□□□ 0.19
LINC01259-201ENST00000507056 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.19
LINC01259-201ENST00000507056 PLEKHD1A6NEE1 506 aa16.21■□□□□ 0.19
LINC01259-201ENST00000507056 FRMPD1Q5SYB0 1578 aa16.2■□□□□ 0.18
LINC01259-201ENST00000507056 SPRYD3Q8NCJ5 442 aa16.19■□□□□ 0.18
LINC01259-201ENST00000507056 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
LINC01259-201ENST00000507056 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
LINC01259-201ENST00000507056 BCORL1Q5H9F3 1711 aa16.17■□□□□ 0.18
LINC01259-201ENST00000507056 FBXO41Q8TF61 875 aa16.17■□□□□ 0.18
LINC01259-201ENST00000507056 STAG3Q9UJ98 1225 aa16.17■□□□□ 0.18
LINC01259-201ENST00000507056 MADDQ8WXG6 1647 aa16.16■□□□□ 0.18
LINC01259-201ENST00000507056 AKNAQ7Z591 1439 aa16.15■□□□□ 0.18
LINC01259-201ENST00000507056 DENND4BO75064 1496 aaPredicted RBP16.15■□□□□ 0.18
LINC01259-201ENST00000507056 EEA1Q15075 1411 aa16.13■□□□□ 0.17
LINC01259-201ENST00000507056 FANCAO15360 1455 aa16.13■□□□□ 0.17
LINC01259-201ENST00000507056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.17
LINC01259-201ENST00000507056 RGL2O15211 777 aa16.12■□□□□ 0.17
LINC01259-201ENST00000507056 RICTORQ6R327 1708 aa16.11■□□□□ 0.17
LINC01259-201ENST00000507056 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
LINC01259-201ENST00000507056 PCF11O94913 1555 aaKnown RBP16.1■□□□□ 0.17
LINC01259-201ENST00000507056 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
LINC01259-201ENST00000507056 ARHGEF40Q8TER5 1519 aa16.09■□□□□ 0.17
LINC01259-201ENST00000507056 RIMS1Q86UR5 1692 aaKnown RBP16.09■□□□□ 0.17
LINC01259-201ENST00000507056 HSPA2P54652 639 aa16.08■□□□□ 0.16
LINC01259-201ENST00000507056 YEATS2Q9ULM3 1422 aa16.08■□□□□ 0.16
LINC01259-201ENST00000507056 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.16
LINC01259-201ENST00000507056 MLECQ14165 292 aa16.07■□□□□ 0.16
LINC01259-201ENST00000507056 CFAP74Q9C0B2 1584 aa16.06■□□□□ 0.16
LINC01259-201ENST00000507056 CDK13Q14004 1512 aaKnown RBP16.06■□□□□ 0.16
LINC01259-201ENST00000507056 SIGLEC1Q9BZZ2 1709 aa16.05■□□□□ 0.16
LINC01259-201ENST00000507056 EFCAB5A4FU69 1503 aa16.05■□□□□ 0.16
LINC01259-201ENST00000507056 ATP1B4Q9UN42 357 aaPredicted RBP16.05■□□□□ 0.16
LINC01259-201ENST00000507056 POGZQ7Z3K3 1410 aa16.04■□□□□ 0.16
LINC01259-201ENST00000507056 CAPN15O75808 1086 aa16.04■□□□□ 0.16
LINC01259-201ENST00000507056 ZMYM4Q5VZL5 1548 aa16.04■□□□□ 0.16
LINC01259-201ENST00000507056 SCAPERQ9BY12 1400 aa16.03■□□□□ 0.16
LINC01259-201ENST00000507056 PLCD3Q8N3E9 789 aa16.03■□□□□ 0.16
LINC01259-201ENST00000507056 ZFYVE16Q7Z3T8 1539 aa16.03■□□□□ 0.16
LINC01259-201ENST00000507056 PLCH2O75038 1416 aa16.02■□□□□ 0.16
LINC01259-201ENST00000507056 HECW1Q76N89 1606 aa16.02■□□□□ 0.16
LINC01259-201ENST00000507056 UBTFP17480 764 aaKnown RBP16.01■□□□□ 0.15
LINC01259-201ENST00000507056 MAGI2Q86UL8 1455 aa16.01■□□□□ 0.15
LINC01259-201ENST00000507056 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
LINC01259-201ENST00000507056 ATP10AO60312 1499 aa15.97■□□□□ 0.15
LINC01259-201ENST00000507056 CEBPAP49715 358 aaPredicted RBP15.96■□□□□ 0.15
LINC01259-201ENST00000507056 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
LINC01259-201ENST00000507056 FER1L4A9Z1Z3 1794 aa15.95■□□□□ 0.14
LINC01259-201ENST00000507056 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
LINC01259-201ENST00000507056 AFAP1Q8N556 730 aa15.94■□□□□ 0.14
LINC01259-201ENST00000507056 CERKQ8TCT0 537 aa15.94■□□□□ 0.14
LINC01259-201ENST00000507056 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
LINC01259-201ENST00000507056 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
LINC01259-201ENST00000507056 CHGAP10645 457 aaKnown RBP15.93■□□□□ 0.14
LINC01259-201ENST00000507056 C9orf84Q5VXU9 1444 aa15.93■□□□□ 0.14
LINC01259-201ENST00000507056 MYO5CQ9NQX4 1742 aa15.92■□□□□ 0.14
LINC01259-201ENST00000507056 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
LINC01259-201ENST00000507056 KIF14Q15058 1648 aa15.92■□□□□ 0.14
LINC01259-201ENST00000507056 ARHGEF12Q9NZN5 1544 aa15.92■□□□□ 0.14
LINC01259-201ENST00000507056 NBR1Q14596 966 aa15.91■□□□□ 0.14
LINC01259-201ENST00000507056 MIER1Q8N108 512 aa15.91■□□□□ 0.14
LINC01259-201ENST00000507056 TROQ12816 1431 aaPredicted RBP15.89■□□□□ 0.13
LINC01259-201ENST00000507056 RNF39Q9H2S5 420 aa15.88■□□□□ 0.13
LINC01259-201ENST00000507056 ZNF518AQ6AHZ1 1483 aa15.88■□□□□ 0.13
LINC01259-201ENST00000507056 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
LINC01259-201ENST00000507056 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
LINC01259-201ENST00000507056 CLIP1P30622 1438 aa15.85■□□□□ 0.13
LINC01259-201ENST00000507056 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
LINC01259-201ENST00000507056 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
LINC01259-201ENST00000507056 SPDYE2Q495Y8 402 aa15.85■□□□□ 0.13
LINC01259-201ENST00000507056 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
LINC01259-201ENST00000507056 KDM5CP41229 1560 aa15.84■□□□□ 0.13
LINC01259-201ENST00000507056 PREX1Q8TCU6 1659 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms