RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 ADAMTSL3P82987 1691 aa9.78□□□□□ -0.84
GYPB-208ENST00000507009 MADDQ8WXG6 1647 aa9.78□□□□□ -0.84
GYPB-208ENST00000507009 RIMS1Q86UR5 1692 aaKnown RBP9.77□□□□□ -0.85
GYPB-208ENST00000507009 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
GYPB-208ENST00000507009 FRMPD1Q5SYB0 1578 aa9.75□□□□□ -0.85
GYPB-208ENST00000507009 PCF11O94913 1555 aaKnown RBP9.74□□□□□ -0.85
GYPB-208ENST00000507009 SAMD9Q5K651 1589 aa9.74□□□□□ -0.85
GYPB-208ENST00000507009 PHLDB1Q86UU1 1377 aa9.74□□□□□ -0.85
GYPB-208ENST00000507009 FHOD3Q2V2M9 1422 aa9.73□□□□□ -0.85
GYPB-208ENST00000507009 NEO1Q92859 1461 aa9.73□□□□□ -0.85
GYPB-208ENST00000507009 HSPA2P54652 639 aa9.73□□□□□ -0.85
GYPB-208ENST00000507009 MLECQ14165 292 aa9.73□□□□□ -0.85
GYPB-208ENST00000507009 CSRNP3Q8WYN3 585 aa9.72□□□□□ -0.85
GYPB-208ENST00000507009 EHMT2Q96KQ7 1210 aa9.72□□□□□ -0.85
GYPB-208ENST00000507009 NUP153P49790 1475 aaKnown RBP9.72□□□□□ -0.85
GYPB-208ENST00000507009 LMTK3Q96Q04 1460 aa9.72□□□□□ -0.85
GYPB-208ENST00000507009 ARHGEF40Q8TER5 1519 aa9.72□□□□□ -0.85
GYPB-208ENST00000507009 PLEKHD1A6NEE1 506 aa9.71□□□□□ -0.86
GYPB-208ENST00000507009 FOXD4L1Q9NU39 408 aa9.71□□□□□ -0.86
GYPB-208ENST00000507009 DENND4BO75064 1496 aaPredicted RBP9.71□□□□□ -0.86
GYPB-208ENST00000507009 RICTORQ6R327 1708 aa9.7□□□□□ -0.86
GYPB-208ENST00000507009 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
GYPB-208ENST00000507009 AKNAQ7Z591 1439 aa9.7□□□□□ -0.86
GYPB-208ENST00000507009 FANCAO15360 1455 aa9.69□□□□□ -0.86
GYPB-208ENST00000507009 CFAP74Q9C0B2 1584 aa9.69□□□□□ -0.86
GYPB-208ENST00000507009 TTC37Q6PGP7 1564 aa9.68□□□□□ -0.86
GYPB-208ENST00000507009 ZFYVE16Q7Z3T8 1539 aa9.67□□□□□ -0.86
GYPB-208ENST00000507009 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.67□□□□□ -0.86
GYPB-208ENST00000507009 POGZQ7Z3K3 1410 aa9.67□□□□□ -0.86
GYPB-208ENST00000507009 YEATS2Q9ULM3 1422 aa9.67□□□□□ -0.86
GYPB-208ENST00000507009 FER1L4A9Z1Z3 1794 aa9.67□□□□□ -0.86
GYPB-208ENST00000507009 SIGLEC1Q9BZZ2 1709 aa9.67□□□□□ -0.86
GYPB-208ENST00000507009 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
GYPB-208ENST00000507009 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
GYPB-208ENST00000507009 EFCAB5A4FU69 1503 aa9.66□□□□□ -0.86
GYPB-208ENST00000507009 HECW1Q76N89 1606 aa9.64□□□□□ -0.87
GYPB-208ENST00000507009 POLA2Q14181 598 aa9.64□□□□□ -0.87
GYPB-208ENST00000507009 CERKQ8TCT0 537 aa9.63□□□□□ -0.87
GYPB-208ENST00000507009 SCAPERQ9BY12 1400 aa9.63□□□□□ -0.87
GYPB-208ENST00000507009 ZMYM4Q5VZL5 1548 aa9.62□□□□□ -0.87
GYPB-208ENST00000507009 CEBPAP49715 358 aaPredicted RBP9.62□□□□□ -0.87
GYPB-208ENST00000507009 MYO5CQ9NQX4 1742 aa9.6□□□□□ -0.87
GYPB-208ENST00000507009 EEA1Q15075 1411 aa9.6□□□□□ -0.87
GYPB-208ENST00000507009 ATF5Q9Y2D1 282 aaPredicted RBP9.6□□□□□ -0.87
GYPB-208ENST00000507009 PREX1Q8TCU6 1659 aa9.59□□□□□ -0.87
GYPB-208ENST00000507009 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
GYPB-208ENST00000507009 MAGI2Q86UL8 1455 aa9.59□□□□□ -0.87
GYPB-208ENST00000507009 PLCH2O75038 1416 aa9.58□□□□□ -0.88
GYPB-208ENST00000507009 EFCAB2Q5VUJ9 269 aa9.58□□□□□ -0.88
GYPB-208ENST00000507009 DISP3Q9P2K9 1392 aa9.58□□□□□ -0.88
GYPB-208ENST00000507009 ATP10AO60312 1499 aa9.58□□□□□ -0.88
GYPB-208ENST00000507009 C9orf84Q5VXU9 1444 aa9.57□□□□□ -0.88
GYPB-208ENST00000507009 ARHGAP5Q13017 1502 aa9.57□□□□□ -0.88
GYPB-208ENST00000507009 KIF14Q15058 1648 aa9.57□□□□□ -0.88
GYPB-208ENST00000507009 ARHGEF12Q9NZN5 1544 aa9.56□□□□□ -0.88
GYPB-208ENST00000507009 ZBTB22O15209 634 aa9.56□□□□□ -0.88
GYPB-208ENST00000507009 POTEHQ6S545 545 aa9.56□□□□□ -0.88
GYPB-208ENST00000507009 AFAP1Q8N556 730 aa9.56□□□□□ -0.88
GYPB-208ENST00000507009 CDK11AQ9UQ88 783 aaPredicted RBP9.55□□□□□ -0.88
GYPB-208ENST00000507009 UHRF1BP1Q6BDS2 1440 aa9.55□□□□□ -0.88
GYPB-208ENST00000507009 ESF1Q9H501 851 aaKnown RBP9.54□□□□□ -0.88
GYPB-208ENST00000507009 STRCQ7RTU9 1775 aa9.54□□□□□ -0.88
GYPB-208ENST00000507009 ZNF518AQ6AHZ1 1483 aa9.53□□□□□ -0.88
GYPB-208ENST00000507009 ILDR2Q71H61 639 aa9.53□□□□□ -0.88
GYPB-208ENST00000507009 RBM42Q9BTD8 480 aaKnown RBP9.53□□□□□ -0.88
GYPB-208ENST00000507009 CLIP1P30622 1438 aa9.53□□□□□ -0.88
GYPB-208ENST00000507009 FMN1Q68DA7 1419 aa9.53□□□□□ -0.88
GYPB-208ENST00000507009 LRRIQ1Q96JM4 1722 aa9.52□□□□□ -0.89
GYPB-208ENST00000507009 DIP2CQ9Y2E4 1556 aa9.52□□□□□ -0.89
GYPB-208ENST00000507009 ABCA6Q8N139 1617 aa9.52□□□□□ -0.89
GYPB-208ENST00000507009 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
GYPB-208ENST00000507009 C3P01024 1663 aa9.51□□□□□ -0.89
GYPB-208ENST00000507009 TROQ12816 1431 aaPredicted RBP9.51□□□□□ -0.89
GYPB-208ENST00000507009 CDC42BPBQ9Y5S2 1711 aa9.51□□□□□ -0.89
GYPB-208ENST00000507009 KDM5CP41229 1560 aa9.5□□□□□ -0.89
GYPB-208ENST00000507009 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
GYPB-208ENST00000507009 SPATA31D1Q6ZQQ2 1576 aa9.49□□□□□ -0.89
GYPB-208ENST00000507009 TRAPPC8Q9Y2L5 1435 aa9.48□□□□□ -0.89
GYPB-208ENST00000507009 PREX2Q70Z35 1606 aa9.48□□□□□ -0.89
GYPB-208ENST00000507009 ITSN2Q9NZM3 1697 aa9.48□□□□□ -0.89
GYPB-208ENST00000507009 SETD1BQ9UPS6 1966 aaKnown RBP9.47□□□□□ -0.89
GYPB-208ENST00000507009 ABCC1P33527 1531 aa9.46□□□□□ -0.89
GYPB-208ENST00000507009 SOCS7O14512 581 aa9.46□□□□□ -0.9
GYPB-208ENST00000507009 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
GYPB-208ENST00000507009 PTPRTO14522 1441 aa9.45□□□□□ -0.9
GYPB-208ENST00000507009 MLH3Q9UHC1 1453 aa9.45□□□□□ -0.9
GYPB-208ENST00000507009 REREQ9P2R6 1566 aa9.45□□□□□ -0.9
GYPB-208ENST00000507009 CDC42BPAQ5VT25 1732 aa9.45□□□□□ -0.9
GYPB-208ENST00000507009 KIDINS220Q9ULH0 1771 aa9.45□□□□□ -0.9
GYPB-208ENST00000507009 NCKAP5LQ9HCH0 1330 aa9.44□□□□□ -0.9
GYPB-208ENST00000507009 CAMSAP1Q5T5Y3 1602 aa9.44□□□□□ -0.9
GYPB-208ENST00000507009 AGLP35573 1532 aa9.43□□□□□ -0.9
GYPB-208ENST00000507009 CLTCQ00610 1675 aaKnown RBP9.42□□□□□ -0.9
GYPB-208ENST00000507009 LTBP4Q8N2S1 1624 aa9.42□□□□□ -0.9
GYPB-208ENST00000507009 SYCP2Q9BX26 1530 aa9.42□□□□□ -0.9
GYPB-208ENST00000507009 CCDC18Q5T9S5 1454 aa9.42□□□□□ -0.9
GYPB-208ENST00000507009 NCOA1Q15788 1441 aa9.42□□□□□ -0.9
GYPB-208ENST00000507009 SPAG9O60271 1321 aaKnown RBP9.42□□□□□ -0.9
GYPB-208ENST00000507009 UBAP1LF5GYI3 381 aa9.42□□□□□ -0.9
GYPB-208ENST00000507009 HNRNPMP52272 730 aaKnown RBP eCLIP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms