RNA–Protein interactions for RNA: ENST00000506836.5

LINC01948-201, Transcript of long intergenic non-protein coding RNA 1948, humanhuman

TSL 2 BASIC

Gene LINC01948, Length 656 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01948-201ENST00000506836 ZFYVE16Q7Z3T8 1539 aa13.59□□□□□ -0.23
LINC01948-201ENST00000506836 CLIP1P30622 1438 aa13.58□□□□□ -0.24
LINC01948-201ENST00000506836 ARHGAP35Q9NRY4 1499 aa13.58□□□□□ -0.24
LINC01948-201ENST00000506836 BCORL1Q5H9F3 1711 aa13.57□□□□□ -0.24
LINC01948-201ENST00000506836 ATP1B4Q9UN42 357 aaPredicted RBP13.57□□□□□ -0.24
LINC01948-201ENST00000506836 RICTORQ6R327 1708 aa13.56□□□□□ -0.24
LINC01948-201ENST00000506836 EFCAB2Q5VUJ9 269 aa13.56□□□□□ -0.24
LINC01948-201ENST00000506836 TROQ12816 1431 aaPredicted RBP13.56□□□□□ -0.24
LINC01948-201ENST00000506836 SCAPERQ9BY12 1400 aa13.56□□□□□ -0.24
LINC01948-201ENST00000506836 MADDQ8WXG6 1647 aa13.55□□□□□ -0.24
LINC01948-201ENST00000506836 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
LINC01948-201ENST00000506836 KIF14Q15058 1648 aa13.54□□□□□ -0.24
LINC01948-201ENST00000506836 EHMT2Q96KQ7 1210 aa13.53□□□□□ -0.24
LINC01948-201ENST00000506836 YEATS2Q9ULM3 1422 aa13.53□□□□□ -0.24
LINC01948-201ENST00000506836 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
LINC01948-201ENST00000506836 ZNF518AQ6AHZ1 1483 aa13.52□□□□□ -0.25
LINC01948-201ENST00000506836 CCDC18Q5T9S5 1454 aa13.51□□□□□ -0.25
LINC01948-201ENST00000506836 LMTK3Q96Q04 1460 aa13.5□□□□□ -0.25
LINC01948-201ENST00000506836 ARHGAP5Q13017 1502 aa13.49□□□□□ -0.25
LINC01948-201ENST00000506836 ATP10AO60312 1499 aa13.49□□□□□ -0.25
LINC01948-201ENST00000506836 CASKIN1Q8WXD9 1431 aa13.48□□□□□ -0.25
LINC01948-201ENST00000506836 MYO5CQ9NQX4 1742 aa13.47□□□□□ -0.25
LINC01948-201ENST00000506836 RIMS1Q86UR5 1692 aaKnown RBP13.47□□□□□ -0.25
LINC01948-201ENST00000506836 FBXO41Q8TF61 875 aa13.47□□□□□ -0.25
LINC01948-201ENST00000506836 KDM5CP41229 1560 aa13.45□□□□□ -0.26
LINC01948-201ENST00000506836 MLECQ14165 292 aa13.45□□□□□ -0.26
LINC01948-201ENST00000506836 ARHGEF12Q9NZN5 1544 aa13.44□□□□□ -0.26
LINC01948-201ENST00000506836 FYCO1Q9BQS8 1478 aa13.44□□□□□ -0.26
LINC01948-201ENST00000506836 MYT1LQ9UL68 1186 aa13.43□□□□□ -0.26
LINC01948-201ENST00000506836 MLH3Q9UHC1 1453 aa13.42□□□□□ -0.26
LINC01948-201ENST00000506836 REREQ9P2R6 1566 aa13.41□□□□□ -0.26
LINC01948-201ENST00000506836 AFAP1Q8N556 730 aa13.41□□□□□ -0.26
LINC01948-201ENST00000506836 ABCC1P33527 1531 aa13.4□□□□□ -0.26
LINC01948-201ENST00000506836 FER1L4A9Z1Z3 1794 aa13.4□□□□□ -0.26
LINC01948-201ENST00000506836 PREX2Q70Z35 1606 aa13.39□□□□□ -0.27
LINC01948-201ENST00000506836 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
LINC01948-201ENST00000506836 DIP2CQ9Y2E4 1556 aa13.38□□□□□ -0.27
LINC01948-201ENST00000506836 HSPA2P54652 639 aa13.38□□□□□ -0.27
LINC01948-201ENST00000506836 ESF1Q9H501 851 aaKnown RBP13.38□□□□□ -0.27
LINC01948-201ENST00000506836 AGLP35573 1532 aa13.38□□□□□ -0.27
LINC01948-201ENST00000506836 UHRF1BP1Q6BDS2 1440 aa13.37□□□□□ -0.27
LINC01948-201ENST00000506836 CNTLNQ9NXG0 1405 aa13.36□□□□□ -0.27
LINC01948-201ENST00000506836 TRAPPC8Q9Y2L5 1435 aa13.36□□□□□ -0.27
LINC01948-201ENST00000506836 PLEKHH2Q8IVE3 1493 aa13.36□□□□□ -0.27
LINC01948-201ENST00000506836 DMRT2Q9Y5R5 561 aa13.34□□□□□ -0.27
LINC01948-201ENST00000506836 LRRIQ1Q96JM4 1722 aa13.33□□□□□ -0.27
LINC01948-201ENST00000506836 ABCA6Q8N139 1617 aa13.33□□□□□ -0.28
LINC01948-201ENST00000506836 KIAA1107Q9UPP5 1409 aa13.32□□□□□ -0.28
LINC01948-201ENST00000506836 PREX1Q8TCU6 1659 aa13.32□□□□□ -0.28
LINC01948-201ENST00000506836 ITSN2Q9NZM3 1697 aa13.32□□□□□ -0.28
LINC01948-201ENST00000506836 CDC42BPBQ9Y5S2 1711 aa13.32□□□□□ -0.28
LINC01948-201ENST00000506836 SPAG9O60271 1321 aaKnown RBP13.32□□□□□ -0.28
LINC01948-201ENST00000506836 MTUS2Q5JR59 1369 aa13.32□□□□□ -0.28
LINC01948-201ENST00000506836 CCNB3Q8WWL7 1395 aa13.32□□□□□ -0.28
LINC01948-201ENST00000506836 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
LINC01948-201ENST00000506836 CEBPAP49715 358 aaPredicted RBP13.31□□□□□ -0.28
LINC01948-201ENST00000506836 ZNF777Q9ULD5 760 aaPredicted RBP13.31□□□□□ -0.28
LINC01948-201ENST00000506836 SYCP2Q9BX26 1530 aa13.3□□□□□ -0.28
LINC01948-201ENST00000506836 CFDP1Q9UEE9 299 aaPredicted RBP13.3□□□□□ -0.28
LINC01948-201ENST00000506836 SAMD9LQ8IVG5 1584 aa13.29□□□□□ -0.28
LINC01948-201ENST00000506836 CERKQ8TCT0 537 aa13.29□□□□□ -0.28
LINC01948-201ENST00000506836 NPATQ14207 1427 aa13.27□□□□□ -0.29
LINC01948-201ENST00000506836 CDC42BPAQ5VT25 1732 aa13.27□□□□□ -0.29
LINC01948-201ENST00000506836 ATP7AQ04656 1500 aa13.26□□□□□ -0.29
LINC01948-201ENST00000506836 EHBP1L1Q8N3D4 1523 aa13.26□□□□□ -0.29
LINC01948-201ENST00000506836 KIDINS220Q9ULH0 1771 aa13.25□□□□□ -0.29
LINC01948-201ENST00000506836 A2MP01023 1474 aa13.24□□□□□ -0.29
LINC01948-201ENST00000506836 PTPRTO14522 1441 aa13.24□□□□□ -0.29
LINC01948-201ENST00000506836 HNRNPMP52272 730 aaKnown RBP eCLIP13.24□□□□□ -0.295e-9■■■■■ 34.7
LINC01948-201ENST00000506836 CEP162Q5TB80 1403 aa13.23□□□□□ -0.29
LINC01948-201ENST00000506836 PLXNC1O60486 1568 aa13.23□□□□□ -0.29
LINC01948-201ENST00000506836 INO80Q9ULG1 1556 aaPredicted RBP13.23□□□□□ -0.29
LINC01948-201ENST00000506836 C3P01024 1663 aa13.22□□□□□ -0.29
LINC01948-201ENST00000506836 NCOA1Q15788 1441 aa13.22□□□□□ -0.29
LINC01948-201ENST00000506836 ZMYM3Q14202 1370 aa13.21□□□□□ -0.29
LINC01948-201ENST00000506836 MROH2AA6NES4 1674 aa13.21□□□□□ -0.3
LINC01948-201ENST00000506836 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
LINC01948-201ENST00000506836 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
LINC01948-201ENST00000506836 SETD1BQ9UPS6 1966 aaKnown RBP13.2□□□□□ -0.3
LINC01948-201ENST00000506836 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
LINC01948-201ENST00000506836 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
LINC01948-201ENST00000506836 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
LINC01948-201ENST00000506836 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
LINC01948-201ENST00000506836 GGT6Q6P531 493 aa13.16□□□□□ -0.3
LINC01948-201ENST00000506836 FAM135AQ9P2D6 1515 aa13.16□□□□□ -0.3
LINC01948-201ENST00000506836 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
LINC01948-201ENST00000506836 STRCQ7RTU9 1775 aa13.15□□□□□ -0.3
LINC01948-201ENST00000506836 PKD2Q13563 968 aa13.15□□□□□ -0.3
LINC01948-201ENST00000506836 DHX29Q7Z478 1369 aaKnown RBP13.15□□□□□ -0.3
LINC01948-201ENST00000506836 NCOA2Q15596 1464 aa13.15□□□□□ -0.3
LINC01948-201ENST00000506836 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.31
LINC01948-201ENST00000506836 ZNF644Q9H582 1327 aaPredicted RBP13.14□□□□□ -0.31
LINC01948-201ENST00000506836 PTPRKQ15262 1439 aa13.14□□□□□ -0.31
LINC01948-201ENST00000506836 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
LINC01948-201ENST00000506836 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
LINC01948-201ENST00000506836 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
LINC01948-201ENST00000506836 MYO3AQ8NEV4 1616 aa13.12□□□□□ -0.31
LINC01948-201ENST00000506836 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
LINC01948-201ENST00000506836 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
LINC01948-201ENST00000506836 ZNF142P52746 1687 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms