RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 ABCC5O15440 1437 aa27.45■■□□□ 1.99
SMN2-206ENST00000506734 NAIPQ13075 1403 aa27.45■■□□□ 1.99
SMN2-206ENST00000506734 ZNF644Q9H582 1327 aaPredicted RBP27.45■■□□□ 1.99
SMN2-206ENST00000506734 TTC37Q6PGP7 1564 aa27.44■■□□□ 1.98
SMN2-206ENST00000506734 GCC2Q8IWJ2 1684 aa27.43■■□□□ 1.98
SMN2-206ENST00000506734 ROCK1Q13464 1354 aa27.41■■□□□ 1.98
SMN2-206ENST00000506734 CDC42BPBQ9Y5S2 1711 aa27.4■■□□□ 1.98
SMN2-206ENST00000506734 CROCC2H7BZ55 1655 aa27.38■■□□□ 1.97
SMN2-206ENST00000506734 MYO5CQ9NQX4 1742 aa27.37■■□□□ 1.97
SMN2-206ENST00000506734 WDR7Q9Y4E6 1490 aa27.37■■□□□ 1.97
SMN2-206ENST00000506734 ZNF777Q9ULD5 760 aaPredicted RBP27.34■■□□□ 1.97
SMN2-206ENST00000506734 CHIC2Q9UKJ5 165 aa27.33■■□□□ 1.97
SMN2-206ENST00000506734 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
SMN2-206ENST00000506734 SAMD9LQ8IVG5 1584 aa27.33■■□□□ 1.97
SMN2-206ENST00000506734 ADGRL2O95490 1459 aa27.32■■□□□ 1.96
SMN2-206ENST00000506734 SHANK2Q9UPX8 1470 aa27.32■■□□□ 1.96
SMN2-206ENST00000506734 ADGBQ8N7X0 1667 aa27.32■■□□□ 1.96
SMN2-206ENST00000506734 KCNH8Q96L42 1107 aa27.3■■□□□ 1.96
SMN2-206ENST00000506734 ARHGAP5Q13017 1502 aa27.3■■□□□ 1.96
SMN2-206ENST00000506734 PLCH2O75038 1416 aa27.29■■□□□ 1.96
SMN2-206ENST00000506734 MAPKBP1O60336 1514 aa27.29■■□□□ 1.96
SMN2-206ENST00000506734 ARAP3Q8WWN8 1544 aa27.28■■□□□ 1.96
SMN2-206ENST00000506734 RRP7BPQ9NSQ0 103 aa27.28■■□□□ 1.96
SMN2-206ENST00000506734 MBD5Q9P267 1494 aa27.28■■□□□ 1.96
SMN2-206ENST00000506734 ASXL2Q76L83 1435 aa27.27■■□□□ 1.96
SMN2-206ENST00000506734 PLEKHH2Q8IVE3 1493 aa27.26■■□□□ 1.95
SMN2-206ENST00000506734 ABCA9Q8IUA7 1624 aa27.24■■□□□ 1.95
SMN2-206ENST00000506734 ACIN1Q9UKV3 1341 aaKnown RBP27.24■■□□□ 1.95
SMN2-206ENST00000506734 NCOA1Q15788 1441 aa27.23■■□□□ 1.95
SMN2-206ENST00000506734 KIAA1107Q9UPP5 1409 aa27.23■■□□□ 1.95
SMN2-206ENST00000506734 NPM1P06748 294 aaKnown RBP eCLIP27.22■■□□□ 1.95
SMN2-206ENST00000506734 RIMBP3CA6NJZ7 1639 aa27.22■■□□□ 1.95
SMN2-206ENST00000506734 RIMBP3BA6NNM3 1639 aa27.22■■□□□ 1.95
SMN2-206ENST00000506734 RIMBP3Q9UFD9 1639 aa27.22■■□□□ 1.95
SMN2-206ENST00000506734 CCDC141Q6ZP82 1450 aa27.22■■□□□ 1.95
SMN2-206ENST00000506734 KDM6BO15054 1643 aa27.22■■□□□ 1.95
SMN2-206ENST00000506734 RSPH4AQ5TD94 716 aa27.22■■□□□ 1.95
SMN2-206ENST00000506734 C9orf84Q5VXU9 1444 aa27.2■■□□□ 1.94
SMN2-206ENST00000506734 ANKRD30AQ9BXX3 1397 aa27.2■■□□□ 1.94
SMN2-206ENST00000506734 SYCP2Q9BX26 1530 aa27.19■■□□□ 1.94
SMN2-206ENST00000506734 HNRNPMP52272 730 aaKnown RBP eCLIP27.16■■□□□ 1.94
SMN2-206ENST00000506734 EFCAB2Q5VUJ9 269 aa27.16■■□□□ 1.94
SMN2-206ENST00000506734 MAST1Q9Y2H9 1570 aa27.15■■□□□ 1.94
SMN2-206ENST00000506734 TSPY4P0CV99 314 aa27.14■■□□□ 1.94
SMN2-206ENST00000506734 TSPY10P0CW01 314 aa27.14■■□□□ 1.94
SMN2-206ENST00000506734 ABCC1P33527 1531 aa27.13■■□□□ 1.93
SMN2-206ENST00000506734 ARHGEF12Q9NZN5 1544 aa27.1■■□□□ 1.93
SMN2-206ENST00000506734 ANKRD50Q9ULJ7 1429 aa27.05■■□□□ 1.92
SMN2-206ENST00000506734 FANCAO15360 1455 aa27.05■■□□□ 1.92
SMN2-206ENST00000506734 CYB5RLQ6IPT4 315 aa27.04■■□□□ 1.92
SMN2-206ENST00000506734 PLXNC1O60486 1568 aa27.03■■□□□ 1.92
SMN2-206ENST00000506734 DENND4BO75064 1496 aaPredicted RBP27.02■■□□□ 1.92
SMN2-206ENST00000506734 KIF15Q9NS87 1388 aa27.02■■□□□ 1.92
SMN2-206ENST00000506734 TRIM52Q96A61 297 aa27.01■■□□□ 1.92
SMN2-206ENST00000506734 TRAPPC8Q9Y2L5 1435 aa26.97■■□□□ 1.91
SMN2-206ENST00000506734 MPHOSPH9Q99550 1183 aa26.97■■□□□ 1.91
SMN2-206ENST00000506734 TIMELESSQ9UNS1 1208 aa26.97■■□□□ 1.91
SMN2-206ENST00000506734 CFAP74Q9C0B2 1584 aa26.96■■□□□ 1.91
SMN2-206ENST00000506734 CD109Q6YHK3 1445 aa26.95■■□□□ 1.91
SMN2-206ENST00000506734 RTEL1-TNFRSF6BF6WH68 1400 aa26.94■■□□□ 1.9
SMN2-206ENST00000506734 ADGRL1O94910 1474 aa26.93■■□□□ 1.9
SMN2-206ENST00000506734 PZPP20742 1482 aa26.93■■□□□ 1.9
SMN2-206ENST00000506734 KDM5DQ9BY66 1539 aa26.93■■□□□ 1.9
SMN2-206ENST00000506734 SIN3AQ96ST3 1273 aa26.92■■□□□ 1.9
SMN2-206ENST00000506734 GLI2P10070 1586 aa26.91■■□□□ 1.9
SMN2-206ENST00000506734 DUOX2Q9NRD8 1548 aa26.9■■□□□ 1.9
SMN2-206ENST00000506734 ZFYVE16Q7Z3T8 1539 aa26.89■■□□□ 1.9
SMN2-206ENST00000506734 SCAPERQ9BY12 1400 aa26.88■■□□□ 1.89
SMN2-206ENST00000506734 INO80Q9ULG1 1556 aaPredicted RBP26.86■■□□□ 1.89
SMN2-206ENST00000506734 MAP3K4Q9Y6R4 1608 aa26.86■■□□□ 1.89
SMN2-206ENST00000506734 ERBINQ96RT1 1412 aa26.86■■□□□ 1.89
SMN2-206ENST00000506734 NEUROD1Q13562 356 aa26.85■■□□□ 1.89
SMN2-206ENST00000506734 SLC4A1APQ9BWU0 796 aaKnown RBP26.85■■□□□ 1.89
SMN2-206ENST00000506734 SPAG9O60271 1321 aaKnown RBP26.85■■□□□ 1.89
SMN2-206ENST00000506734 UNC13BO14795 1591 aa26.84■■□□□ 1.89
SMN2-206ENST00000506734 NEO1Q92859 1461 aa26.84■■□□□ 1.89
SMN2-206ENST00000506734 ANKRD30BQ9BXX2 1392 aa26.82■■□□□ 1.88
SMN2-206ENST00000506734 AFAP1Q8N556 730 aa26.82■■□□□ 1.88
SMN2-206ENST00000506734 ATP7AQ04656 1500 aa26.82■■□□□ 1.88
SMN2-206ENST00000506734 NUP155O75694 1391 aa26.81■■□□□ 1.88
SMN2-206ENST00000506734 ZNF518AQ6AHZ1 1483 aa26.8■■□□□ 1.88
SMN2-206ENST00000506734 DIP2BQ9P265 1576 aa26.79■■□□□ 1.88
SMN2-206ENST00000506734 TONSLQ96HA7 1378 aa26.77■■□□□ 1.88
SMN2-206ENST00000506734 MAGI2Q86UL8 1455 aa26.77■■□□□ 1.88
SMN2-206ENST00000506734 KDM5CP41229 1560 aa26.76■■□□□ 1.87
SMN2-206ENST00000506734 POGZQ7Z3K3 1410 aa26.76■■□□□ 1.87
SMN2-206ENST00000506734 ZNF316A6NFI3 1004 aaPredicted RBP26.75■■□□□ 1.87
SMN2-206ENST00000506734 FAM135AQ9P2D6 1515 aa26.73■■□□□ 1.87
SMN2-206ENST00000506734 FOXD1Q16676 465 aa26.73■■□□□ 1.87
SMN2-206ENST00000506734 RPRD2Q5VT52 1461 aaKnown RBP26.72■■□□□ 1.87
SMN2-206ENST00000506734 IQGAP3Q86VI3 1631 aa26.72■■□□□ 1.87
SMN2-206ENST00000506734 KIDINS220Q9ULH0 1771 aa26.71■■□□□ 1.87
SMN2-206ENST00000506734 PPP1R15AO75807 674 aaPredicted RBP26.71■■□□□ 1.87
SMN2-206ENST00000506734 PKD2Q13563 968 aa26.71■■□□□ 1.87
SMN2-206ENST00000506734 MLH3Q9UHC1 1453 aa26.69■■□□□ 1.86
SMN2-206ENST00000506734 EIF2AK4Q9P2K8 1649 aaKnown RBP26.67■■□□□ 1.86
SMN2-206ENST00000506734 DEPDC5O75140 1603 aa26.66■■□□□ 1.86
SMN2-206ENST00000506734 FAM69CQ0P6D2 419 aa26.66■■□□□ 1.86
SMN2-206ENST00000506734 HECW2Q9P2P5 1572 aa26.65■■□□□ 1.86
SMN2-206ENST00000506734 DHX29Q7Z478 1369 aaKnown RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms