RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 C9orf84Q5VXU9 1444 aa17.48■□□□□ 0.39
SNCA-210ENST00000506691 FMN1Q68DA7 1419 aa17.48■□□□□ 0.39
SNCA-210ENST00000506691 SCAPERQ9BY12 1400 aa17.48■□□□□ 0.39
SNCA-210ENST00000506691 SIGLEC1Q9BZZ2 1709 aa17.48■□□□□ 0.39
SNCA-210ENST00000506691 REREQ9P2R6 1566 aa17.47■□□□□ 0.39
SNCA-210ENST00000506691 ZNF518AQ6AHZ1 1483 aa17.46■□□□□ 0.39
SNCA-210ENST00000506691 CERKQ8TCT0 537 aa17.46■□□□□ 0.39
SNCA-210ENST00000506691 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
SNCA-210ENST00000506691 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.39
SNCA-210ENST00000506691 EFCAB2Q5VUJ9 269 aa17.45■□□□□ 0.38
SNCA-210ENST00000506691 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
SNCA-210ENST00000506691 KDM5CP41229 1560 aa17.45■□□□□ 0.38
SNCA-210ENST00000506691 SETD1BQ9UPS6 1966 aaKnown RBP17.44■□□□□ 0.38
SNCA-210ENST00000506691 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
SNCA-210ENST00000506691 HSPA2P54652 639 aa17.42■□□□□ 0.38
SNCA-210ENST00000506691 CDK13Q14004 1512 aaKnown RBP17.42■□□□□ 0.38
SNCA-210ENST00000506691 KIF14Q15058 1648 aa17.4■□□□□ 0.38
SNCA-210ENST00000506691 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
SNCA-210ENST00000506691 MLH3Q9UHC1 1453 aa17.38■□□□□ 0.37
SNCA-210ENST00000506691 AGLP35573 1532 aa17.38■□□□□ 0.37
SNCA-210ENST00000506691 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
SNCA-210ENST00000506691 CLIP1P30622 1438 aa17.37■□□□□ 0.37
SNCA-210ENST00000506691 UHRF1BP1Q6BDS2 1440 aa17.36■□□□□ 0.37
SNCA-210ENST00000506691 PTPRTO14522 1441 aa17.35■□□□□ 0.37
SNCA-210ENST00000506691 IQSEC2Q5JU85 1478 aa17.35■□□□□ 0.37
SNCA-210ENST00000506691 STRCQ7RTU9 1775 aa17.35■□□□□ 0.37
SNCA-210ENST00000506691 DIP2CQ9Y2E4 1556 aa17.33■□□□□ 0.37
SNCA-210ENST00000506691 ARHGAP35Q9NRY4 1499 aa17.33■□□□□ 0.37
SNCA-210ENST00000506691 RANGAP1P46060 587 aaPredicted RBP17.33■□□□□ 0.36
SNCA-210ENST00000506691 ARHGAP5Q13017 1502 aa17.32■□□□□ 0.36
SNCA-210ENST00000506691 CNTLNQ9NXG0 1405 aa17.31■□□□□ 0.36
SNCA-210ENST00000506691 MLECQ14165 292 aa17.31■□□□□ 0.36
SNCA-210ENST00000506691 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
SNCA-210ENST00000506691 ABCC1P33527 1531 aa17.28■□□□□ 0.36
SNCA-210ENST00000506691 CDC42BPBQ9Y5S2 1711 aa17.28■□□□□ 0.36
SNCA-210ENST00000506691 CCDC18Q5T9S5 1454 aa17.28■□□□□ 0.36
SNCA-210ENST00000506691 TRAPPC8Q9Y2L5 1435 aa17.28■□□□□ 0.36
SNCA-210ENST00000506691 C3P01024 1663 aa17.27■□□□□ 0.36
SNCA-210ENST00000506691 ABCA6Q8N139 1617 aa17.27■□□□□ 0.36
SNCA-210ENST00000506691 CEP162Q5TB80 1403 aa17.27■□□□□ 0.35
SNCA-210ENST00000506691 AFAP1Q8N556 730 aa17.26■□□□□ 0.35
SNCA-210ENST00000506691 NPATQ14207 1427 aa17.26■□□□□ 0.35
SNCA-210ENST00000506691 MROH2AA6NES4 1674 aa17.25■□□□□ 0.35
SNCA-210ENST00000506691 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
SNCA-210ENST00000506691 CEBPAP49715 358 aaPredicted RBP17.23■□□□□ 0.35
SNCA-210ENST00000506691 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
SNCA-210ENST00000506691 CASKIN1Q8WXD9 1431 aa17.22■□□□□ 0.35
SNCA-210ENST00000506691 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
SNCA-210ENST00000506691 LTBP4Q8N2S1 1624 aa17.21■□□□□ 0.35
SNCA-210ENST00000506691 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
SNCA-210ENST00000506691 KIDINS220Q9ULH0 1771 aa17.21■□□□□ 0.35
SNCA-210ENST00000506691 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
SNCA-210ENST00000506691 SOCS7O14512 581 aa17.19■□□□□ 0.34
SNCA-210ENST00000506691 DISP3Q9P2K9 1392 aa17.17■□□□□ 0.34
SNCA-210ENST00000506691 CDC42BPAQ5VT25 1732 aa17.17■□□□□ 0.34
SNCA-210ENST00000506691 ATP1B4Q9UN42 357 aaPredicted RBP17.17■□□□□ 0.34
SNCA-210ENST00000506691 PLA2R1Q13018 1463 aa17.16■□□□□ 0.34
SNCA-210ENST00000506691 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
SNCA-210ENST00000506691 KIAA1107Q9UPP5 1409 aa17.15■□□□□ 0.34
SNCA-210ENST00000506691 MYT1LQ9UL68 1186 aa17.15■□□□□ 0.34
SNCA-210ENST00000506691 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
SNCA-210ENST00000506691 PLEKHH2Q8IVE3 1493 aa17.15■□□□□ 0.34
SNCA-210ENST00000506691 FYCO1Q9BQS8 1478 aa17.15■□□□□ 0.34
SNCA-210ENST00000506691 SPATA31D1Q6ZQQ2 1576 aa17.14■□□□□ 0.33
SNCA-210ENST00000506691 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
SNCA-210ENST00000506691 PLXNC1O60486 1568 aa17.13■□□□□ 0.33
SNCA-210ENST00000506691 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
SNCA-210ENST00000506691 PKD2Q13563 968 aa17.1■□□□□ 0.33
SNCA-210ENST00000506691 ZMYM3Q14202 1370 aa17.1■□□□□ 0.33
SNCA-210ENST00000506691 INO80Q9ULG1 1556 aaPredicted RBP17.1■□□□□ 0.33
SNCA-210ENST00000506691 VPS8Q8N3P4 1428 aa17.09■□□□□ 0.33
SNCA-210ENST00000506691 GPATCH8Q9UKJ3 1502 aaKnown RBP17.09■□□□□ 0.33
SNCA-210ENST00000506691 ATP7AQ04656 1500 aa17.08■□□□□ 0.32
SNCA-210ENST00000506691 TCOF1Q13428 1488 aaKnown RBP17.08■□□□□ 0.32
SNCA-210ENST00000506691 ILDR2Q71H61 639 aa17.08■□□□□ 0.32
SNCA-210ENST00000506691 FAM135AQ9P2D6 1515 aa17.07■□□□□ 0.32
SNCA-210ENST00000506691 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
SNCA-210ENST00000506691 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
SNCA-210ENST00000506691 MYO3AQ8NEV4 1616 aa17.06■□□□□ 0.32
SNCA-210ENST00000506691 A2MP01023 1474 aa17.05■□□□□ 0.32
SNCA-210ENST00000506691 CEP170BQ9Y4F5 1589 aaPredicted RBP17.05■□□□□ 0.32
SNCA-210ENST00000506691 PTPRKQ15262 1439 aa17.04■□□□□ 0.32
SNCA-210ENST00000506691 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
SNCA-210ENST00000506691 CLTCQ00610 1675 aaKnown RBP17.02■□□□□ 0.32
SNCA-210ENST00000506691 RTEL1-TNFRSF6BF6WH68 1400 aa17.02■□□□□ 0.31
SNCA-210ENST00000506691 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
SNCA-210ENST00000506691 APLP2Q06481 763 aa17■□□□□ 0.31
SNCA-210ENST00000506691 A2ML1A8K2U0 1454 aa16.99■□□□□ 0.31
SNCA-210ENST00000506691 CFDP1Q9UEE9 299 aaPredicted RBP16.98■□□□□ 0.31
SNCA-210ENST00000506691 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
SNCA-210ENST00000506691 MAP3K1Q13233 1512 aa16.97■□□□□ 0.31
SNCA-210ENST00000506691 CPS1P31327 1500 aa16.96■□□□□ 0.31
SNCA-210ENST00000506691 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNCA-210ENST00000506691 ZNF777Q9ULD5 760 aaPredicted RBP16.95■□□□□ 0.3
SNCA-210ENST00000506691 DNMT1P26358 1616 aaKnown RBP16.95■□□□□ 0.3
SNCA-210ENST00000506691 ZNF335Q9H4Z2 1342 aaPredicted RBP16.95■□□□□ 0.3
SNCA-210ENST00000506691 MBD5Q9P267 1494 aa16.94■□□□□ 0.3
SNCA-210ENST00000506691 NCKAP5LQ9HCH0 1330 aa16.94■□□□□ 0.3
SNCA-210ENST00000506691 DHX29Q7Z478 1369 aaKnown RBP16.93■□□□□ 0.3
SNCA-210ENST00000506691 RSPH4AQ5TD94 716 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms