RNA–Protein interactions for RNA: ENST00000506664.5

LINC00461-206, long intergenic non-protein coding RNA 461, humanhuman

TSL 2

Gene LINC00461, Length 762 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-206ENST00000506664 SOX12O15370 315 aa14.65□□□□□ -0.06
LINC00461-206ENST00000506664 FBXO22Q8NEZ5 403 aa14.62□□□□□ -0.07
LINC00461-206ENST00000506664 PCDH10Q9P2E7 1040 aa14.62□□□□□ -0.07
LINC00461-206ENST00000506664 PHF8Q9UPP1 1060 aa14.62□□□□□ -0.07
LINC00461-206ENST00000506664 NLRP6P59044 892 aa14.61□□□□□ -0.07
LINC00461-206ENST00000506664 C3orf67Q6ZVT6 689 aa14.61□□□□□ -0.07
LINC00461-206ENST00000506664 NACADO15069 1562 aa14.55□□□□□ -0.08
LINC00461-206ENST00000506664 SNPHO15079 494 aa14.54□□□□□ -0.08
LINC00461-206ENST00000506664 PPP1R37O75864 691 aa14.54□□□□□ -0.08
LINC00461-206ENST00000506664 DPY19L2Q6NUT2 758 aa14.53□□□□□ -0.08
LINC00461-206ENST00000506664 ST18O60284 1047 aa14.52□□□□□ -0.09
LINC00461-206ENST00000506664 MS4A4AQ96JQ5 239 aa14.52□□□□□ -0.09
LINC00461-206ENST00000506664 CECR2Q9BXF3 1484 aa14.51□□□□□ -0.09
LINC00461-206ENST00000506664 BOLA1Q9Y3E2 137 aa14.5□□□□□ -0.09
LINC00461-206ENST00000506664 TMEM121BQ9BXQ6 578 aaPredicted RBP14.48□□□□□ -0.09
LINC00461-206ENST00000506664 G3V3G9 751 aa14.47□□□□□ -0.09
LINC00461-206ENST00000506664 CADPS2Q86UW7 1296 aa14.47□□□□□ -0.09
LINC00461-206ENST00000506664 PLSCR2Q9NRY7 297 aa14.47□□□□□ -0.09
LINC00461-206ENST00000506664 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
LINC00461-206ENST00000506664 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
LINC00461-206ENST00000506664 CC2D2AQ9P2K1 1620 aa14.38□□□□□ -0.11
LINC00461-206ENST00000506664 BCANQ96GW7 911 aa14.36□□□□□ -0.11
LINC00461-206ENST00000506664 CDAN1Q8IWY9 1227 aa14.34□□□□□ -0.11
LINC00461-206ENST00000506664 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
LINC00461-206ENST00000506664 WDR70Q9NW82 654 aa14.29□□□□□ -0.12
LINC00461-206ENST00000506664 MARVELD3Q96A59 401 aa14.27□□□□□ -0.13
LINC00461-206ENST00000506664 HOXB3P14651 431 aaPredicted RBP14.26□□□□□ -0.13
LINC00461-206ENST00000506664 NCKAP5LQ9HCH0 1330 aa14.25□□□□□ -0.13
LINC00461-206ENST00000506664 EMP3P54852 163 aa14.22□□□□□ -0.13
LINC00461-206ENST00000506664 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
LINC00461-206ENST00000506664 PDE4AP27815 886 aa14.21□□□□□ -0.13
LINC00461-206ENST00000506664 DOK7Q18PE1 504 aa14.21□□□□□ -0.13
LINC00461-206ENST00000506664 TMEM92Q6UXU6 159 aa14.21□□□□□ -0.13
LINC00461-206ENST00000506664 CRISPLD2Q9H0B8 497 aa14.21□□□□□ -0.13
LINC00461-206ENST00000506664 LARP6Q9BRS8 491 aaKnown RBP14.2□□□□□ -0.14
LINC00461-206ENST00000506664 P3H3Q8IVL6 736 aa14.18□□□□□ -0.14
LINC00461-206ENST00000506664 CUX2O14529 1486 aa14.18□□□□□ -0.14
LINC00461-206ENST00000506664 NBR1Q14596 966 aa14.17□□□□□ -0.14
LINC00461-206ENST00000506664 MFSD10Q14728 455 aa14.16□□□□□ -0.14
LINC00461-206ENST00000506664 KCNV2Q8TDN2 545 aa14.16□□□□□ -0.14
LINC00461-206ENST00000506664 EIF4G1Q04637 1599 aaKnown RBP14.15□□□□□ -0.14
LINC00461-206ENST00000506664 HOXB1P14653 301 aaPredicted RBP14.15□□□□□ -0.14
LINC00461-206ENST00000506664 ZNF710Q8N1W2 664 aa14.15□□□□□ -0.14
LINC00461-206ENST00000506664 RIMBP2O15034 1052 aa14.13□□□□□ -0.15
LINC00461-206ENST00000506664 E2F4Q16254 413 aa14.12□□□□□ -0.15
LINC00461-206ENST00000506664 DDX27Q96GQ7 796 aaKnown RBP14.12□□□□□ -0.15
LINC00461-206ENST00000506664 HS3ST6Q96QI5 342 aa14.11□□□□□ -0.15
LINC00461-206ENST00000506664 ZSWIM6Q9HCJ5 1215 aa14.11□□□□□ -0.15
LINC00461-206ENST00000506664 GPHNQ9NQX3 736 aaPredicted RBP14.11□□□□□ -0.15
LINC00461-206ENST00000506664 FAM205CA6NFA0 338 aa14.09□□□□□ -0.15
LINC00461-206ENST00000506664 POTEB3A0JP26 581 aa14.08□□□□□ -0.16
LINC00461-206ENST00000506664 POTEBQ6S5H4 581 aa14.08□□□□□ -0.16
LINC00461-206ENST00000506664 MYO15BQ96JP2 1530 aa14.07□□□□□ -0.16
LINC00461-206ENST00000506664 TMC2Q8TDI7 906 aa14.06□□□□□ -0.16
LINC00461-206ENST00000506664 PPP1R15BQ5SWA1 713 aa14.05□□□□□ -0.16
LINC00461-206ENST00000506664 KIF3CO14782 793 aa14.03□□□□□ -0.16
LINC00461-206ENST00000506664 ARHGEF1Q92888 912 aaKnown RBP14.03□□□□□ -0.16
LINC00461-206ENST00000506664 DSG2Q14126 1118 aa14.02□□□□□ -0.17
LINC00461-206ENST00000506664 C2orf72A6NCS6 295 aa14.01□□□□□ -0.17
LINC00461-206ENST00000506664 CAMK2BQ13554 666 aa14.01□□□□□ -0.17
LINC00461-206ENST00000506664 GPR153Q6NV75 609 aa14.01□□□□□ -0.17
LINC00461-206ENST00000506664 SPNS2Q8IVW8 549 aa14□□□□□ -0.17
LINC00461-206ENST00000506664 KRTAP3-3Q9BYR6 98 aa14□□□□□ -0.17
LINC00461-206ENST00000506664 KRTAP3-2Q9BYR7 98 aa14□□□□□ -0.17
LINC00461-206ENST00000506664 FOXK1P85037 733 aa13.99□□□□□ -0.17
LINC00461-206ENST00000506664 ERBB3P21860 1342 aa13.98□□□□□ -0.17
LINC00461-206ENST00000506664 MMRN1Q13201 1228 aa13.94□□□□□ -0.18
LINC00461-206ENST00000506664 PLPP6Q8IY26 295 aa13.94□□□□□ -0.18
LINC00461-206ENST00000506664 ARIH1Q9Y4X5 557 aaPredicted RBP13.93□□□□□ -0.18
LINC00461-206ENST00000506664 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
LINC00461-206ENST00000506664 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
LINC00461-206ENST00000506664 PRKCSHP14314 528 aaPredicted RBP13.9□□□□□ -0.18
LINC00461-206ENST00000506664 EMILIN3Q9NT22 766 aa13.9□□□□□ -0.18
LINC00461-206ENST00000506664 SLC34A2O95436 690 aa13.89□□□□□ -0.19
LINC00461-206ENST00000506664 ARSIQ5FYB1 569 aa13.89□□□□□ -0.19
LINC00461-206ENST00000506664 TPRNQ4KMQ1 711 aa13.88□□□□□ -0.19
LINC00461-206ENST00000506664 SEMA3EO15041 775 aa13.87□□□□□ -0.19
LINC00461-206ENST00000506664 ZNF687Q8N1G0 1237 aa13.85□□□□□ -0.19
LINC00461-206ENST00000506664 DPYSL4O14531 572 aa13.84□□□□□ -0.19
LINC00461-206ENST00000506664 TESPA1A2RU30 521 aaPredicted RBP13.82□□□□□ -0.2
LINC00461-206ENST00000506664 ZNF316A6NFI3 1004 aaPredicted RBP13.81□□□□□ -0.2
LINC00461-206ENST00000506664 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC00461-206ENST00000506664 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC00461-206ENST00000506664 UPF1Q92900 1129 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC00461-206ENST00000506664 PCDHGA4Q9Y5G9 962 aa13.78□□□□□ -0.2
LINC00461-206ENST00000506664 TULP1O00294 542 aaPredicted RBP13.76□□□□□ -0.21
LINC00461-206ENST00000506664 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
LINC00461-206ENST00000506664 SPDYE16A6NNV3 312 aaPredicted RBP13.75□□□□□ -0.21
LINC00461-206ENST00000506664 MAP3K9P80192 1104 aa13.75□□□□□ -0.21
LINC00461-206ENST00000506664 PDIA6Q15084 440 aa13.75□□□□□ -0.21
LINC00461-206ENST00000506664 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
LINC00461-206ENST00000506664 OXER1Q8TDS5 423 aa13.75□□□□□ -0.21
LINC00461-206ENST00000506664 NUDT7P0C024 238 aa13.74□□□□□ -0.21
LINC00461-206ENST00000506664 PTCD2Q8WV60 388 aaKnown RBP13.72□□□□□ -0.21
LINC00461-206ENST00000506664 MLLT3P42568 568 aaPredicted RBP13.71□□□□□ -0.21
LINC00461-206ENST00000506664 SMYD5Q6GMV2 418 aa13.7□□□□□ -0.22
LINC00461-206ENST00000506664 LHX6Q9UPM6 363 aa13.68□□□□□ -0.22
LINC00461-206ENST00000506664 KDM4FA0A1W2PPD8 638 aa13.67□□□□□ -0.22
LINC00461-206ENST00000506664 PBX2P40425 430 aa13.67□□□□□ -0.22
LINC00461-206ENST00000506664 PTGER2P43116 358 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms