RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 CCDC18Q5T9S5 1454 aa23.27■■□□□ 1.32
CDC42SE2-209ENST00000506419 MAGI2Q86UL8 1455 aa23.27■■□□□ 1.32
CDC42SE2-209ENST00000506419 ZMYM4Q5VZL5 1548 aa23.26■■□□□ 1.31
CDC42SE2-209ENST00000506419 ARHGEF40Q8TER5 1519 aa23.26■■□□□ 1.31
CDC42SE2-209ENST00000506419 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
CDC42SE2-209ENST00000506419 ZFYVE16Q7Z3T8 1539 aa23.23■■□□□ 1.31
CDC42SE2-209ENST00000506419 HECW2Q9P2P5 1572 aa23.23■■□□□ 1.31
CDC42SE2-209ENST00000506419 ARHGAP5Q13017 1502 aa23.23■■□□□ 1.31
CDC42SE2-209ENST00000506419 BCORL1Q5H9F3 1711 aa23.22■■□□□ 1.31
CDC42SE2-209ENST00000506419 LOC105371045A0A1W2PR82 267 aa23.22■■□□□ 1.31
CDC42SE2-209ENST00000506419 MLECQ14165 292 aa23.22■■□□□ 1.31
CDC42SE2-209ENST00000506419 MYO5CQ9NQX4 1742 aa23.22■■□□□ 1.31
CDC42SE2-209ENST00000506419 ATP10AO60312 1499 aa23.19■■□□□ 1.3
CDC42SE2-209ENST00000506419 ARHGEF12Q9NZN5 1544 aa23.18■■□□□ 1.3
CDC42SE2-209ENST00000506419 SIGLEC1Q9BZZ2 1709 aa23.18■■□□□ 1.3
CDC42SE2-209ENST00000506419 TRAPPC8Q9Y2L5 1435 aa23.16■■□□□ 1.3
CDC42SE2-209ENST00000506419 MADDQ8WXG6 1647 aa23.16■■□□□ 1.3
CDC42SE2-209ENST00000506419 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
CDC42SE2-209ENST00000506419 MYT1LQ9UL68 1186 aa23.15■■□□□ 1.3
CDC42SE2-209ENST00000506419 ZNF777Q9ULD5 760 aaPredicted RBP23.15■■□□□ 1.3
CDC42SE2-209ENST00000506419 CDC42BPBQ9Y5S2 1711 aa23.15■■□□□ 1.3
CDC42SE2-209ENST00000506419 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
CDC42SE2-209ENST00000506419 CEP162Q5TB80 1403 aa23.15■■□□□ 1.3
CDC42SE2-209ENST00000506419 GPATCH8Q9UKJ3 1502 aaKnown RBP23.13■■□□□ 1.29
CDC42SE2-209ENST00000506419 C9orf84Q5VXU9 1444 aa23.11■■□□□ 1.29
CDC42SE2-209ENST00000506419 HNRNPMP52272 730 aaKnown RBP eCLIP23.11■■□□□ 1.299e-6■■■■□ 19.4
CDC42SE2-209ENST00000506419 KDM5CP41229 1560 aa23.1■■□□□ 1.29
CDC42SE2-209ENST00000506419 MLH3Q9UHC1 1453 aa23.09■■□□□ 1.29
CDC42SE2-209ENST00000506419 PREX2Q70Z35 1606 aa23.08■■□□□ 1.29
CDC42SE2-209ENST00000506419 CFDP1Q9UEE9 299 aaPredicted RBP23.08■■□□□ 1.29
CDC42SE2-209ENST00000506419 MTUS2Q5JR59 1369 aa23.08■■□□□ 1.29
CDC42SE2-209ENST00000506419 ABCC1P33527 1531 aa23.07■■□□□ 1.28
CDC42SE2-209ENST00000506419 RIMS1Q86UR5 1692 aaKnown RBP23.06■■□□□ 1.28
CDC42SE2-209ENST00000506419 CCNB3Q8WWL7 1395 aa23.05■■□□□ 1.28
CDC42SE2-209ENST00000506419 CEBPAP49715 358 aaPredicted RBP23.05■■□□□ 1.28
CDC42SE2-209ENST00000506419 CDC42BPAQ5VT25 1732 aa23.05■■□□□ 1.28
CDC42SE2-209ENST00000506419 ILDR1Q86SU0 546 aaPredicted RBP23.03■■□□□ 1.28
CDC42SE2-209ENST00000506419 ZNF644Q9H582 1327 aaPredicted RBP23.03■■□□□ 1.28
CDC42SE2-209ENST00000506419 LMTK3Q96Q04 1460 aa23.01■■□□□ 1.27
CDC42SE2-209ENST00000506419 HSPA2P54652 639 aa23.01■■□□□ 1.27
CDC42SE2-209ENST00000506419 DIP2CQ9Y2E4 1556 aa23.01■■□□□ 1.27
CDC42SE2-209ENST00000506419 SPAG9O60271 1321 aaKnown RBP23■■□□□ 1.27
CDC42SE2-209ENST00000506419 SAMD9LQ8IVG5 1584 aa22.99■■□□□ 1.27
CDC42SE2-209ENST00000506419 KIAA1107Q9UPP5 1409 aa22.99■■□□□ 1.27
CDC42SE2-209ENST00000506419 ITSN2Q9NZM3 1697 aa22.97■■□□□ 1.27
CDC42SE2-209ENST00000506419 ABCA6Q8N139 1617 aa22.97■■□□□ 1.27
CDC42SE2-209ENST00000506419 SYCP2Q9BX26 1530 aa22.95■■□□□ 1.26
CDC42SE2-209ENST00000506419 REREQ9P2R6 1566 aa22.94■■□□□ 1.26
CDC42SE2-209ENST00000506419 KIDINS220Q9ULH0 1771 aa22.94■■□□□ 1.26
CDC42SE2-209ENST00000506419 AGLP35573 1532 aa22.92■■□□□ 1.26
CDC42SE2-209ENST00000506419 PLEKHH2Q8IVE3 1493 aa22.92■■□□□ 1.26
CDC42SE2-209ENST00000506419 FER1L4A9Z1Z3 1794 aa22.91■■□□□ 1.26
CDC42SE2-209ENST00000506419 EHBP1L1Q8N3D4 1523 aa22.9■■□□□ 1.26
CDC42SE2-209ENST00000506419 TIAM1Q13009 1591 aa22.89■■□□□ 1.26
CDC42SE2-209ENST00000506419 MBD5Q9P267 1494 aa22.89■■□□□ 1.25
CDC42SE2-209ENST00000506419 VPS8Q8N3P4 1428 aa22.89■■□□□ 1.25
CDC42SE2-209ENST00000506419 KANK4Q5T7N3 995 aaPredicted RBP22.88■■□□□ 1.25
CDC42SE2-209ENST00000506419 NCOA2Q15596 1464 aa22.86■■□□□ 1.25
CDC42SE2-209ENST00000506419 ESF1Q9H501 851 aaKnown RBP22.86■■□□□ 1.25
CDC42SE2-209ENST00000506419 ATP7AQ04656 1500 aa22.82■■□□□ 1.24
CDC42SE2-209ENST00000506419 A2MP01023 1474 aa22.81■■□□□ 1.24
CDC42SE2-209ENST00000506419 GGT6Q6P531 493 aa22.81■■□□□ 1.24
CDC42SE2-209ENST00000506419 LRRC9Q6ZRR7 1453 aa22.8■■□□□ 1.24
CDC42SE2-209ENST00000506419 ZMYM3Q14202 1370 aa22.78■■□□□ 1.24
CDC42SE2-209ENST00000506419 RSPH4AQ5TD94 716 aa22.78■■□□□ 1.24
CDC42SE2-209ENST00000506419 INO80Q9ULG1 1556 aaPredicted RBP22.77■■□□□ 1.24
CDC42SE2-209ENST00000506419 RTEL1-TNFRSF6BF6WH68 1400 aa22.77■■□□□ 1.24
CDC42SE2-209ENST00000506419 CNTLNQ9NXG0 1405 aa22.76■■□□□ 1.23
CDC42SE2-209ENST00000506419 DHX29Q7Z478 1369 aaKnown RBP22.76■■□□□ 1.23
CDC42SE2-209ENST00000506419 SUPT6HQ7KZ85 1726 aaKnown RBP22.74■■□□□ 1.23
CDC42SE2-209ENST00000506419 UHRF1BP1Q6BDS2 1440 aa22.74■■□□□ 1.23
CDC42SE2-209ENST00000506419 CAMSAP2Q08AD1 1489 aa22.73■■□□□ 1.23
CDC42SE2-209ENST00000506419 PLXNC1O60486 1568 aa22.73■■□□□ 1.23
CDC42SE2-209ENST00000506419 SETD1BQ9UPS6 1966 aaKnown RBP22.73■■□□□ 1.23
CDC42SE2-209ENST00000506419 C3P01024 1663 aa22.72■■□□□ 1.23
CDC42SE2-209ENST00000506419 FBXO41Q8TF61 875 aa22.72■■□□□ 1.23
CDC42SE2-209ENST00000506419 PPP6R1Q9UPN7 881 aa22.72■■□□□ 1.23
CDC42SE2-209ENST00000506419 MAP3K1Q13233 1512 aa22.72■■□□□ 1.23
CDC42SE2-209ENST00000506419 TSPY4P0CV99 314 aa22.71■■□□□ 1.23
CDC42SE2-209ENST00000506419 TSPY10P0CW01 314 aa22.71■■□□□ 1.23
CDC42SE2-209ENST00000506419 CCDC141Q6ZP82 1450 aa22.7■■□□□ 1.22
CDC42SE2-209ENST00000506419 PREX1Q8TCU6 1659 aa22.7■■□□□ 1.22
CDC42SE2-209ENST00000506419 KIF3BO15066 747 aa22.69■■□□□ 1.22
CDC42SE2-209ENST00000506419 DMRT2Q9Y5R5 561 aa22.66■■□□□ 1.22
CDC42SE2-209ENST00000506419 NPATQ14207 1427 aa22.65■■□□□ 1.22
CDC42SE2-209ENST00000506419 PTPRKQ15262 1439 aa22.64■■□□□ 1.21
CDC42SE2-209ENST00000506419 APLP2Q06481 763 aa22.63■■□□□ 1.21
CDC42SE2-209ENST00000506419 CERKQ8TCT0 537 aa22.63■■□□□ 1.21
CDC42SE2-209ENST00000506419 ADGBQ8N7X0 1667 aa22.62■■□□□ 1.21
CDC42SE2-209ENST00000506419 MYOM3Q5VTT5 1437 aa22.62■■□□□ 1.21
CDC42SE2-209ENST00000506419 STRCQ7RTU9 1775 aa22.61■■□□□ 1.21
CDC42SE2-209ENST00000506419 ARHGEF5Q12774 1597 aa22.61■■□□□ 1.21
CDC42SE2-209ENST00000506419 MIA2Q96PC5 1412 aa22.61■■□□□ 1.21
CDC42SE2-209ENST00000506419 FBXO31Q5XUX0 539 aaPredicted RBP22.6■■□□□ 1.21
CDC42SE2-209ENST00000506419 CLTCQ00610 1675 aaKnown RBP22.6■■□□□ 1.21
CDC42SE2-209ENST00000506419 MROH2AA6NES4 1674 aa22.59■■□□□ 1.21
CDC42SE2-209ENST00000506419 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
CDC42SE2-209ENST00000506419 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
CDC42SE2-209ENST00000506419 PTPRTO14522 1441 aa22.55■■□□□ 1.2
CDC42SE2-209ENST00000506419 NCOA1Q15788 1441 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms