RNA–Protein interactions for RNA: ENST00000506239.6

SMN1-205, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-205ENST00000506239 ABCC5O15440 1437 aa27.45■■□□□ 1.99
SMN1-205ENST00000506239 NAIPQ13075 1403 aa27.45■■□□□ 1.99
SMN1-205ENST00000506239 ZNF644Q9H582 1327 aaPredicted RBP27.45■■□□□ 1.99
SMN1-205ENST00000506239 TTC37Q6PGP7 1564 aa27.44■■□□□ 1.98
SMN1-205ENST00000506239 GCC2Q8IWJ2 1684 aa27.43■■□□□ 1.98
SMN1-205ENST00000506239 ROCK1Q13464 1354 aa27.41■■□□□ 1.98
SMN1-205ENST00000506239 CDC42BPBQ9Y5S2 1711 aa27.4■■□□□ 1.98
SMN1-205ENST00000506239 CROCC2H7BZ55 1655 aa27.38■■□□□ 1.97
SMN1-205ENST00000506239 MYO5CQ9NQX4 1742 aa27.37■■□□□ 1.97
SMN1-205ENST00000506239 WDR7Q9Y4E6 1490 aa27.37■■□□□ 1.97
SMN1-205ENST00000506239 ZNF777Q9ULD5 760 aaPredicted RBP27.34■■□□□ 1.97
SMN1-205ENST00000506239 CHIC2Q9UKJ5 165 aa27.33■■□□□ 1.97
SMN1-205ENST00000506239 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
SMN1-205ENST00000506239 SAMD9LQ8IVG5 1584 aa27.33■■□□□ 1.97
SMN1-205ENST00000506239 ADGRL2O95490 1459 aa27.32■■□□□ 1.96
SMN1-205ENST00000506239 SHANK2Q9UPX8 1470 aa27.32■■□□□ 1.96
SMN1-205ENST00000506239 ADGBQ8N7X0 1667 aa27.32■■□□□ 1.96
SMN1-205ENST00000506239 KCNH8Q96L42 1107 aa27.3■■□□□ 1.96
SMN1-205ENST00000506239 ARHGAP5Q13017 1502 aa27.3■■□□□ 1.96
SMN1-205ENST00000506239 PLCH2O75038 1416 aa27.29■■□□□ 1.96
SMN1-205ENST00000506239 MAPKBP1O60336 1514 aa27.29■■□□□ 1.96
SMN1-205ENST00000506239 ARAP3Q8WWN8 1544 aa27.28■■□□□ 1.96
SMN1-205ENST00000506239 RRP7BPQ9NSQ0 103 aa27.28■■□□□ 1.96
SMN1-205ENST00000506239 MBD5Q9P267 1494 aa27.28■■□□□ 1.96
SMN1-205ENST00000506239 ASXL2Q76L83 1435 aa27.27■■□□□ 1.96
SMN1-205ENST00000506239 PLEKHH2Q8IVE3 1493 aa27.26■■□□□ 1.95
SMN1-205ENST00000506239 ABCA9Q8IUA7 1624 aa27.24■■□□□ 1.95
SMN1-205ENST00000506239 ACIN1Q9UKV3 1341 aaKnown RBP27.24■■□□□ 1.95
SMN1-205ENST00000506239 NCOA1Q15788 1441 aa27.23■■□□□ 1.95
SMN1-205ENST00000506239 KIAA1107Q9UPP5 1409 aa27.23■■□□□ 1.95
SMN1-205ENST00000506239 NPM1P06748 294 aaKnown RBP eCLIP27.22■■□□□ 1.95
SMN1-205ENST00000506239 RIMBP3CA6NJZ7 1639 aa27.22■■□□□ 1.95
SMN1-205ENST00000506239 RIMBP3BA6NNM3 1639 aa27.22■■□□□ 1.95
SMN1-205ENST00000506239 RIMBP3Q9UFD9 1639 aa27.22■■□□□ 1.95
SMN1-205ENST00000506239 CCDC141Q6ZP82 1450 aa27.22■■□□□ 1.95
SMN1-205ENST00000506239 KDM6BO15054 1643 aa27.22■■□□□ 1.95
SMN1-205ENST00000506239 RSPH4AQ5TD94 716 aa27.22■■□□□ 1.95
SMN1-205ENST00000506239 C9orf84Q5VXU9 1444 aa27.2■■□□□ 1.94
SMN1-205ENST00000506239 ANKRD30AQ9BXX3 1397 aa27.2■■□□□ 1.94
SMN1-205ENST00000506239 SYCP2Q9BX26 1530 aa27.19■■□□□ 1.94
SMN1-205ENST00000506239 HNRNPMP52272 730 aaKnown RBP eCLIP27.16■■□□□ 1.94
SMN1-205ENST00000506239 EFCAB2Q5VUJ9 269 aa27.16■■□□□ 1.94
SMN1-205ENST00000506239 MAST1Q9Y2H9 1570 aa27.15■■□□□ 1.94
SMN1-205ENST00000506239 TSPY4P0CV99 314 aa27.14■■□□□ 1.94
SMN1-205ENST00000506239 TSPY10P0CW01 314 aa27.14■■□□□ 1.94
SMN1-205ENST00000506239 ABCC1P33527 1531 aa27.13■■□□□ 1.93
SMN1-205ENST00000506239 ARHGEF12Q9NZN5 1544 aa27.1■■□□□ 1.93
SMN1-205ENST00000506239 ANKRD50Q9ULJ7 1429 aa27.05■■□□□ 1.92
SMN1-205ENST00000506239 FANCAO15360 1455 aa27.05■■□□□ 1.92
SMN1-205ENST00000506239 CYB5RLQ6IPT4 315 aa27.04■■□□□ 1.92
SMN1-205ENST00000506239 PLXNC1O60486 1568 aa27.03■■□□□ 1.92
SMN1-205ENST00000506239 DENND4BO75064 1496 aaPredicted RBP27.02■■□□□ 1.92
SMN1-205ENST00000506239 KIF15Q9NS87 1388 aa27.02■■□□□ 1.92
SMN1-205ENST00000506239 TRIM52Q96A61 297 aa27.01■■□□□ 1.92
SMN1-205ENST00000506239 TRAPPC8Q9Y2L5 1435 aa26.97■■□□□ 1.91
SMN1-205ENST00000506239 MPHOSPH9Q99550 1183 aa26.97■■□□□ 1.91
SMN1-205ENST00000506239 TIMELESSQ9UNS1 1208 aa26.97■■□□□ 1.91
SMN1-205ENST00000506239 CFAP74Q9C0B2 1584 aa26.96■■□□□ 1.91
SMN1-205ENST00000506239 CD109Q6YHK3 1445 aa26.95■■□□□ 1.91
SMN1-205ENST00000506239 RTEL1-TNFRSF6BF6WH68 1400 aa26.94■■□□□ 1.9
SMN1-205ENST00000506239 ADGRL1O94910 1474 aa26.93■■□□□ 1.9
SMN1-205ENST00000506239 PZPP20742 1482 aa26.93■■□□□ 1.9
SMN1-205ENST00000506239 KDM5DQ9BY66 1539 aa26.93■■□□□ 1.9
SMN1-205ENST00000506239 SIN3AQ96ST3 1273 aa26.92■■□□□ 1.9
SMN1-205ENST00000506239 GLI2P10070 1586 aa26.91■■□□□ 1.9
SMN1-205ENST00000506239 DUOX2Q9NRD8 1548 aa26.9■■□□□ 1.9
SMN1-205ENST00000506239 ZFYVE16Q7Z3T8 1539 aa26.89■■□□□ 1.9
SMN1-205ENST00000506239 SCAPERQ9BY12 1400 aa26.88■■□□□ 1.89
SMN1-205ENST00000506239 INO80Q9ULG1 1556 aaPredicted RBP26.86■■□□□ 1.89
SMN1-205ENST00000506239 MAP3K4Q9Y6R4 1608 aa26.86■■□□□ 1.89
SMN1-205ENST00000506239 ERBINQ96RT1 1412 aa26.86■■□□□ 1.89
SMN1-205ENST00000506239 NEUROD1Q13562 356 aa26.85■■□□□ 1.89
SMN1-205ENST00000506239 SLC4A1APQ9BWU0 796 aaKnown RBP26.85■■□□□ 1.89
SMN1-205ENST00000506239 SPAG9O60271 1321 aaKnown RBP26.85■■□□□ 1.89
SMN1-205ENST00000506239 UNC13BO14795 1591 aa26.84■■□□□ 1.89
SMN1-205ENST00000506239 NEO1Q92859 1461 aa26.84■■□□□ 1.89
SMN1-205ENST00000506239 ANKRD30BQ9BXX2 1392 aa26.82■■□□□ 1.88
SMN1-205ENST00000506239 AFAP1Q8N556 730 aa26.82■■□□□ 1.88
SMN1-205ENST00000506239 ATP7AQ04656 1500 aa26.82■■□□□ 1.88
SMN1-205ENST00000506239 NUP155O75694 1391 aa26.81■■□□□ 1.88
SMN1-205ENST00000506239 ZNF518AQ6AHZ1 1483 aa26.8■■□□□ 1.88
SMN1-205ENST00000506239 DIP2BQ9P265 1576 aa26.79■■□□□ 1.88
SMN1-205ENST00000506239 TONSLQ96HA7 1378 aa26.77■■□□□ 1.88
SMN1-205ENST00000506239 MAGI2Q86UL8 1455 aa26.77■■□□□ 1.88
SMN1-205ENST00000506239 KDM5CP41229 1560 aa26.76■■□□□ 1.87
SMN1-205ENST00000506239 POGZQ7Z3K3 1410 aa26.76■■□□□ 1.87
SMN1-205ENST00000506239 ZNF316A6NFI3 1004 aaPredicted RBP26.75■■□□□ 1.87
SMN1-205ENST00000506239 FAM135AQ9P2D6 1515 aa26.73■■□□□ 1.87
SMN1-205ENST00000506239 FOXD1Q16676 465 aa26.73■■□□□ 1.87
SMN1-205ENST00000506239 RPRD2Q5VT52 1461 aaKnown RBP26.72■■□□□ 1.87
SMN1-205ENST00000506239 IQGAP3Q86VI3 1631 aa26.72■■□□□ 1.87
SMN1-205ENST00000506239 KIDINS220Q9ULH0 1771 aa26.71■■□□□ 1.87
SMN1-205ENST00000506239 PPP1R15AO75807 674 aaPredicted RBP26.71■■□□□ 1.87
SMN1-205ENST00000506239 PKD2Q13563 968 aa26.71■■□□□ 1.87
SMN1-205ENST00000506239 MLH3Q9UHC1 1453 aa26.69■■□□□ 1.86
SMN1-205ENST00000506239 EIF2AK4Q9P2K8 1649 aaKnown RBP26.67■■□□□ 1.86
SMN1-205ENST00000506239 DEPDC5O75140 1603 aa26.66■■□□□ 1.86
SMN1-205ENST00000506239 FAM69CQ0P6D2 419 aa26.66■■□□□ 1.86
SMN1-205ENST00000506239 HECW2Q9P2P5 1572 aa26.65■■□□□ 1.86
SMN1-205ENST00000506239 DHX29Q7Z478 1369 aaKnown RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms