RNA–Protein interactions for RNA: ENST00000506222.6

LINC01016-201, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 2 BASIC

Gene LINC01016, Length 3,151 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-201ENST00000506222 RAPGEF3O95398 923 aa17.26■□□□□ 0.35
LINC01016-201ENST00000506222 EFCAB2Q5VUJ9 269 aa17.26■□□□□ 0.35
LINC01016-201ENST00000506222 ABCC5O15440 1437 aa17.25■□□□□ 0.35
LINC01016-201ENST00000506222 PTPN23Q9H3S7 1636 aa17.25■□□□□ 0.35
LINC01016-201ENST00000506222 ABCC2Q92887 1545 aa17.25■□□□□ 0.35
LINC01016-201ENST00000506222 ASXL2Q76L83 1435 aa17.24■□□□□ 0.35
LINC01016-201ENST00000506222 SHROOM2Q13796 1616 aa17.23■□□□□ 0.35
LINC01016-201ENST00000506222 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
LINC01016-201ENST00000506222 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
LINC01016-201ENST00000506222 NAIPQ13075 1403 aa17.21■□□□□ 0.35
LINC01016-201ENST00000506222 CAMSAP2Q08AD1 1489 aa17.2■□□□□ 0.34
LINC01016-201ENST00000506222 ARHGAP5Q13017 1502 aa17.2■□□□□ 0.34
LINC01016-201ENST00000506222 MPHOSPH9Q99550 1183 aa17.2■□□□□ 0.34
LINC01016-201ENST00000506222 DAPK1P53355 1430 aa17.2■□□□□ 0.34
LINC01016-201ENST00000506222 MIA2Q96PC5 1412 aa17.17■□□□□ 0.34
LINC01016-201ENST00000506222 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
LINC01016-201ENST00000506222 ADCY10Q96PN6 1610 aa17.16■□□□□ 0.34
LINC01016-201ENST00000506222 PKD2Q13563 968 aa17.16■□□□□ 0.34
LINC01016-201ENST00000506222 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
LINC01016-201ENST00000506222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC01016-201ENST00000506222 KDM5BQ9UGL1 1544 aa17.13■□□□□ 0.33
LINC01016-201ENST00000506222 TTC37Q6PGP7 1564 aa17.13■□□□□ 0.33
LINC01016-201ENST00000506222 RGL3Q3MIN7 710 aa17.13■□□□□ 0.33
LINC01016-201ENST00000506222 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
LINC01016-201ENST00000506222 KDM6BO15054 1643 aa17.12■□□□□ 0.33
LINC01016-201ENST00000506222 ZCCHC11Q5TAX3 1644 aaKnown RBP17.12■□□□□ 0.33
LINC01016-201ENST00000506222 NUP155O75694 1391 aa17.12■□□□□ 0.33
LINC01016-201ENST00000506222 TRAPPC8Q9Y2L5 1435 aa17.12■□□□□ 0.33
LINC01016-201ENST00000506222 GGT6Q6P531 493 aa17.12■□□□□ 0.33
LINC01016-201ENST00000506222 KDM2AQ9Y2K7 1162 aa17.12■□□□□ 0.33
LINC01016-201ENST00000506222 HFM1A2PYH4 1435 aa17.12■□□□□ 0.33
LINC01016-201ENST00000506222 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
LINC01016-201ENST00000506222 MLECQ14165 292 aa17.11■□□□□ 0.33
LINC01016-201ENST00000506222 SCAPERQ9BY12 1400 aa17.11■□□□□ 0.33
LINC01016-201ENST00000506222 KIF3BO15066 747 aa17.1■□□□□ 0.33
LINC01016-201ENST00000506222 ANKRD30AQ9BXX3 1397 aa17.1■□□□□ 0.33
LINC01016-201ENST00000506222 WDR7Q9Y4E6 1490 aa17.1■□□□□ 0.33
LINC01016-201ENST00000506222 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
LINC01016-201ENST00000506222 C9orf84Q5VXU9 1444 aa17.1■□□□□ 0.33
LINC01016-201ENST00000506222 CD109Q6YHK3 1445 aa17.08■□□□□ 0.32
LINC01016-201ENST00000506222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.08■□□□□ 0.32
LINC01016-201ENST00000506222 SYCP2Q9BX26 1530 aa17.08■□□□□ 0.32
LINC01016-201ENST00000506222 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.32
LINC01016-201ENST00000506222 ARHGEF12Q9NZN5 1544 aa17.07■□□□□ 0.32
LINC01016-201ENST00000506222 PLCH2O75038 1416 aa17.06■□□□□ 0.32
LINC01016-201ENST00000506222 TCOF1Q13428 1488 aaKnown RBP17.06■□□□□ 0.32
LINC01016-201ENST00000506222 ANKRD50Q9ULJ7 1429 aa17.06■□□□□ 0.32
LINC01016-201ENST00000506222 FANCAO15360 1455 aa17.04■□□□□ 0.32
LINC01016-201ENST00000506222 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
LINC01016-201ENST00000506222 UHRF1BP1LA0JNW5 1464 aa17.03■□□□□ 0.32
LINC01016-201ENST00000506222 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
LINC01016-201ENST00000506222 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
LINC01016-201ENST00000506222 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
LINC01016-201ENST00000506222 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
LINC01016-201ENST00000506222 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
LINC01016-201ENST00000506222 L3MBTL2Q969R5 705 aa17.01■□□□□ 0.31
LINC01016-201ENST00000506222 CDC42BPAQ5VT25 1732 aa17.01■□□□□ 0.31
LINC01016-201ENST00000506222 MAPKBP1O60336 1514 aa17.01■□□□□ 0.31
LINC01016-201ENST00000506222 ZNF316A6NFI3 1004 aaPredicted RBP17■□□□□ 0.31
LINC01016-201ENST00000506222 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
LINC01016-201ENST00000506222 SAMD9LQ8IVG5 1584 aa16.99■□□□□ 0.31
LINC01016-201ENST00000506222 PLEKHH2Q8IVE3 1493 aa16.99■□□□□ 0.31
LINC01016-201ENST00000506222 CHGAP10645 457 aaKnown RBP16.99■□□□□ 0.31
LINC01016-201ENST00000506222 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
LINC01016-201ENST00000506222 ADGRL1O94910 1474 aa16.97■□□□□ 0.31
LINC01016-201ENST00000506222 CCDC141Q6ZP82 1450 aa16.96■□□□□ 0.31
LINC01016-201ENST00000506222 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.31
LINC01016-201ENST00000506222 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
LINC01016-201ENST00000506222 PPP1R15AO75807 674 aaPredicted RBP16.94■□□□□ 0.3
LINC01016-201ENST00000506222 NUTM2DQ5VT03 806 aaPredicted RBP16.94■□□□□ 0.3
LINC01016-201ENST00000506222 DNMT1P26358 1616 aaKnown RBP16.93■□□□□ 0.3
LINC01016-201ENST00000506222 ROCK1Q13464 1354 aa16.92■□□□□ 0.3
LINC01016-201ENST00000506222 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
LINC01016-201ENST00000506222 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
LINC01016-201ENST00000506222 DENND4BO75064 1496 aaPredicted RBP16.91■□□□□ 0.3
LINC01016-201ENST00000506222 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
LINC01016-201ENST00000506222 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
LINC01016-201ENST00000506222 CLSPNQ9HAW4 1339 aa16.89■□□□□ 0.29
LINC01016-201ENST00000506222 DDX10Q13206 875 aaKnown RBP16.89■□□□□ 0.29
LINC01016-201ENST00000506222 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
LINC01016-201ENST00000506222 TSPOAP1O95153 1857 aa16.88■□□□□ 0.29
LINC01016-201ENST00000506222 PREX2Q70Z35 1606 aa16.86■□□□□ 0.29
LINC01016-201ENST00000506222 WASHC2CQ9Y4E1 1318 aa16.85■□□□□ 0.29
LINC01016-201ENST00000506222 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
LINC01016-201ENST00000506222 ANKRD30BQ9BXX2 1392 aa16.84■□□□□ 0.29
LINC01016-201ENST00000506222 KIAA1107Q9UPP5 1409 aa16.83■□□□□ 0.29
LINC01016-201ENST00000506222 PZPP20742 1482 aa16.83■□□□□ 0.28
LINC01016-201ENST00000506222 YEATS2Q9ULM3 1422 aa16.82■□□□□ 0.28
LINC01016-201ENST00000506222 MIER1Q8N108 512 aa16.82■□□□□ 0.28
LINC01016-201ENST00000506222 DNAJC5Q9H3Z4 198 aa16.82■□□□□ 0.28
LINC01016-201ENST00000506222 FBXO31Q5XUX0 539 aaPredicted RBP16.79■□□□□ 0.28
LINC01016-201ENST00000506222 ABCC1P33527 1531 aa16.78■□□□□ 0.28
LINC01016-201ENST00000506222 ADGRL2O95490 1459 aa16.76■□□□□ 0.27
LINC01016-201ENST00000506222 COL17A1Q9UMD9 1497 aaPredicted RBP16.76■□□□□ 0.27
LINC01016-201ENST00000506222 HSPA5P11021 654 aaKnown RBP16.76■□□□□ 0.27
LINC01016-201ENST00000506222 NBPF1Q3BBV0 1214 aa16.76■□□□□ 0.27
LINC01016-201ENST00000506222 ABCA9Q8IUA7 1624 aa16.74■□□□□ 0.27
LINC01016-201ENST00000506222 DHX29Q7Z478 1369 aaKnown RBP16.74■□□□□ 0.27
LINC01016-201ENST00000506222 CEBPAP49715 358 aaPredicted RBP16.74■□□□□ 0.27
LINC01016-201ENST00000506222 CFAP65Q6ZU64 1925 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms