RNA–Protein interactions for RNA: ENST00000506165.1

APBB3-211, Transcript of amyloid beta precursor protein binding family B member 3, human

TSL 2

Gene APBB3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBB3-211	ENST00000506165	PLCH2	O75038	1416 aa		29.03	■■■□□ 2.24
APBB3-211	ENST00000506165	ARHGEF12	Q9NZN5	1544 aa		29.02	■■■□□ 2.24
APBB3-211	ENST00000506165	PREX1	Q8TCU6	1659 aa		29	■■■□□ 2.23
APBB3-211	ENST00000506165	SCAPER	Q9BY12	1400 aa		28.98	■■■□□ 2.23
APBB3-211	ENST00000506165	LRRIQ1	Q96JM4	1722 aa		28.96	■■■□□ 2.23
APBB3-211	ENST00000506165	STRC	Q7RTU9	1775 aa		28.95	■■■□□ 2.22
APBB3-211	ENST00000506165	ATP10A	O60312	1499 aa		28.94	■■■□□ 2.22
APBB3-211	ENST00000506165	KIF14	Q15058	1648 aa		28.94	■■■□□ 2.22
APBB3-211	ENST00000506165	SETD1B	Q9UPS6	1966 aa	Known RBP	28.91	■■■□□ 2.22
APBB3-211	ENST00000506165	KDM5C	P41229	1560 aa		28.9	■■■□□ 2.22
APBB3-211	ENST00000506165	C9orf84	Q5VXU9	1444 aa		28.9	■■■□□ 2.22
APBB3-211	ENST00000506165	PLPPR3	Q6T4P5	718 aa		28.88	■■■□□ 2.21
APBB3-211	ENST00000506165	CERK	Q8TCT0	537 aa		28.88	■■■□□ 2.21
APBB3-211	ENST00000506165	MLEC	Q14165	292 aa		28.87	■■■□□ 2.21
APBB3-211	ENST00000506165	CDC42BPB	Q9Y5S2	1711 aa		28.86	■■■□□ 2.21
APBB3-211	ENST00000506165	ARHGAP35	Q9NRY4	1499 aa		28.84	■■■□□ 2.21
APBB3-211	ENST00000506165	RERE	Q9P2R6	1566 aa		28.83	■■■□□ 2.21
APBB3-211	ENST00000506165	DIP2C	Q9Y2E4	1556 aa		28.82	■■■□□ 2.2
APBB3-211	ENST00000506165	ZNF518A	Q6AHZ1	1483 aa		28.81	■■■□□ 2.2
APBB3-211	ENST00000506165	FMN1	Q68DA7	1419 aa		28.81	■■■□□ 2.2
APBB3-211	ENST00000506165	EFCAB2	Q5VUJ9	269 aa		28.81	■■■□□ 2.2
APBB3-211	ENST00000506165	C3	P01024	1663 aa		28.8	■■■□□ 2.2
APBB3-211	ENST00000506165	ABCA6	Q8N139	1617 aa		28.79	■■■□□ 2.2
APBB3-211	ENST00000506165	TRO	Q12816	1431 aa	Predicted RBP	28.77	■■■□□ 2.2
APBB3-211	ENST00000506165	CEBPA	P49715	358 aa	Predicted RBP	28.76	■■■□□ 2.19
APBB3-211	ENST00000506165	ARHGAP5	Q13017	1502 aa		28.74	■■■□□ 2.19
APBB3-211	ENST00000506165	PREX2	Q70Z35	1606 aa		28.72	■■■□□ 2.19
APBB3-211	ENST00000506165	ITSN2	Q9NZM3	1697 aa		28.72	■■■□□ 2.19
APBB3-211	ENST00000506165	AFAP1	Q8N556	730 aa		28.71	■■■□□ 2.19
APBB3-211	ENST00000506165	MLH3	Q9UHC1	1453 aa		28.71	■■■□□ 2.19
APBB3-211	ENST00000506165	KIDINS220	Q9ULH0	1771 aa		28.69	■■■□□ 2.18
APBB3-211	ENST00000506165	AGL	P35573	1532 aa		28.69	■■■□□ 2.18
APBB3-211	ENST00000506165	ABCC1	P33527	1531 aa		28.68	■■■□□ 2.18
APBB3-211	ENST00000506165	CDC42BPA	Q5VT25	1732 aa		28.67	■■■□□ 2.18
APBB3-211	ENST00000506165	CDK11A	Q9UQ88	783 aa	Predicted RBP	28.67	■■■□□ 2.18
APBB3-211	ENST00000506165	UHRF1BP1	Q6BDS2	1440 aa		28.66	■■■□□ 2.18
APBB3-211	ENST00000506165	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.63	■■■□□ 2.17
APBB3-211	ENST00000506165	CLIP1	P30622	1438 aa		28.62	■■■□□ 2.17
APBB3-211	ENST00000506165	TRAPPC8	Q9Y2L5	1435 aa		28.61	■■■□□ 2.17
APBB3-211	ENST00000506165	PTPRT	O14522	1441 aa		28.6	■■■□□ 2.17
APBB3-211	ENST00000506165	UBTF	P17480	764 aa	Known RBP	28.6	■■■□□ 2.17
APBB3-211	ENST00000506165	LTBP4	Q8N2S1	1624 aa		28.59	■■■□□ 2.17
APBB3-211	ENST00000506165	DMRT2	Q9Y5R5	561 aa		28.59	■■■□□ 2.17
APBB3-211	ENST00000506165	MROH2A	A6NES4	1674 aa		28.57	■■■□□ 2.16
APBB3-211	ENST00000506165	EHMT2	Q96KQ7	1210 aa		28.53	■■■□□ 2.16
APBB3-211	ENST00000506165	CCDC18	Q5T9S5	1454 aa		28.52	■■■□□ 2.16
APBB3-211	ENST00000506165	ILDR2	Q71H61	639 aa		28.51	■■■□□ 2.15
APBB3-211	ENST00000506165	CASKIN1	Q8WXD9	1431 aa		28.51	■■■□□ 2.15
APBB3-211	ENST00000506165	SAMD9L	Q8IVG5	1584 aa		28.5	■■■□□ 2.15
APBB3-211	ENST00000506165	NCOA1	Q15788	1441 aa		28.48	■■■□□ 2.15
APBB3-211	ENST00000506165	IQSEC2	Q5JU85	1478 aa		28.46	■■■□□ 2.15
APBB3-211	ENST00000506165	CNTLN	Q9NXG0	1405 aa		28.46	■■■□□ 2.15
APBB3-211	ENST00000506165	SUPT6H	Q7KZ85	1726 aa	Known RBP	28.45	■■■□□ 2.14
APBB3-211	ENST00000506165	MYT1L	Q9UL68	1186 aa		28.44	■■■□□ 2.14
APBB3-211	ENST00000506165	DISP3	Q9P2K9	1392 aa		28.44	■■■□□ 2.14
APBB3-211	ENST00000506165	ZNF142	P52746	1687 aa	Predicted RBP	28.42	■■■□□ 2.14
APBB3-211	ENST00000506165	SPATA31D1	Q6ZQQ2	1576 aa		28.42	■■■□□ 2.14
APBB3-211	ENST00000506165	CAMSAP1	Q5T5Y3	1602 aa		28.42	■■■□□ 2.14
APBB3-211	ENST00000506165	NPAT	Q14207	1427 aa		28.41	■■■□□ 2.14
APBB3-211	ENST00000506165	CLTC	Q00610	1675 aa	Known RBP	28.41	■■■□□ 2.14
APBB3-211	ENST00000506165	PLXNC1	O60486	1568 aa		28.41	■■■□□ 2.14
APBB3-211	ENST00000506165	SYCP2	Q9BX26	1530 aa		28.39	■■■□□ 2.14
APBB3-211	ENST00000506165	INO80	Q9ULG1	1556 aa	Predicted RBP	28.39	■■■□□ 2.14
APBB3-211	ENST00000506165	FYCO1	Q9BQS8	1478 aa		28.38	■■■□□ 2.13
APBB3-211	ENST00000506165	GPATCH8	Q9UKJ3	1502 aa	Known RBP	28.37	■■■□□ 2.13
APBB3-211	ENST00000506165	MYO3A	Q8NEV4	1616 aa		28.36	■■■□□ 2.13
APBB3-211	ENST00000506165	SOCS7	O14512	581 aa		28.36	■■■□□ 2.13
APBB3-211	ENST00000506165	ATP7A	Q04656	1500 aa		28.33	■■■□□ 2.13
APBB3-211	ENST00000506165	ESF1	Q9H501	851 aa	Known RBP	28.33	■■■□□ 2.13
APBB3-211	ENST00000506165	ZMYM3	Q14202	1370 aa		28.33	■■■□□ 2.13
APBB3-211	ENST00000506165	ADGB	Q8N7X0	1667 aa		28.28	■■■□□ 2.12
APBB3-211	ENST00000506165	KIAA1107	Q9UPP5	1409 aa		28.27	■■■□□ 2.12
APBB3-211	ENST00000506165	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	28.27	■■■□□ 2.12
APBB3-211	ENST00000506165	PLA2R1	Q13018	1463 aa		28.27	■■■□□ 2.12
APBB3-211	ENST00000506165	TCOF1	Q13428	1488 aa	Known RBP	28.26	■■■□□ 2.11
APBB3-211	ENST00000506165	SPAG9	O60271	1321 aa	Known RBP	28.25	■■■□□ 2.11
APBB3-211	ENST00000506165	PTPRK	Q15262	1439 aa		28.25	■■■□□ 2.11
APBB3-211	ENST00000506165	A2M	P01023	1474 aa		28.24	■■■□□ 2.11
APBB3-211	ENST00000506165	HNRNPM	P52272	730 aa	Known RBP eCLIP	28.24	■■■□□ 2.11
APBB3-211	ENST00000506165	PLEKHH2	Q8IVE3	1493 aa		28.21	■■■□□ 2.11
APBB3-211	ENST00000506165	NCKAP5L	Q9HCH0	1330 aa		28.21	■■■□□ 2.11
APBB3-211	ENST00000506165	ZNF777	Q9ULD5	760 aa	Predicted RBP	28.21	■■■□□ 2.11
APBB3-211	ENST00000506165	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	28.18	■■■□□ 2.1
APBB3-211	ENST00000506165	POLR1A	O95602	1720 aa	Predicted RBP	28.16	■■■□□ 2.1
APBB3-211	ENST00000506165	DNMT1	P26358	1616 aa	Known RBP	28.16	■■■□□ 2.1
APBB3-211	ENST00000506165	TIAM1	Q13009	1591 aa		28.15	■■■□□ 2.1
APBB3-211	ENST00000506165	PKD2	Q13563	968 aa		28.13	■■■□□ 2.09
APBB3-211	ENST00000506165	MBD5	Q9P267	1494 aa		28.12	■■■□□ 2.09
APBB3-211	ENST00000506165	CFDP1	Q9UEE9	299 aa	Predicted RBP	28.11	■■■□□ 2.09
APBB3-211	ENST00000506165	NEURL4	Q96JN8	1562 aa		28.09	■■■□□ 2.09
APBB3-211	ENST00000506165	CCNB3	Q8WWL7	1395 aa		28.09	■■■□□ 2.09
APBB3-211	ENST00000506165	A2ML1	A8K2U0	1454 aa		28.08	■■■□□ 2.09
APBB3-211	ENST00000506165	PPP6R1	Q9UPN7	881 aa		28.08	■■■□□ 2.09
APBB3-211	ENST00000506165	GGT6	Q6P531	493 aa		28.06	■■■□□ 2.08
APBB3-211	ENST00000506165	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.05	■■■□□ 2.08
APBB3-211	ENST00000506165	UBAP1L	F5GYI3	381 aa		28.04	■■■□□ 2.08
APBB3-211	ENST00000506165	ZNF644	Q9H582	1327 aa	Predicted RBP	28.03	■■■□□ 2.08
APBB3-211	ENST00000506165	EHBP1L1	Q8N3D4	1523 aa		28.02	■■■□□ 2.08
APBB3-211	ENST00000506165	LOC105371045	A0A1W2PR82	267 aa		28.01	■■■□□ 2.07
APBB3-211	ENST00000506165	MTUS2	Q5JR59	1369 aa		28	■■■□□ 2.07

Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms