RNA–Protein interactions for RNA: ENST00000505980.5

SSBP2-205, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-205ENST00000505980 UACAQ9BZF9 1416 aa13.61□□□□□ -0.23
SSBP2-205ENST00000505980 ADCY10Q96PN6 1610 aa13.61□□□□□ -0.23
SSBP2-205ENST00000505980 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
SSBP2-205ENST00000505980 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
SSBP2-205ENST00000505980 CDK11AQ9UQ88 783 aaPredicted RBP13.59□□□□□ -0.23
SSBP2-205ENST00000505980 ABCC2Q92887 1545 aa13.59□□□□□ -0.23
SSBP2-205ENST00000505980 UHRF1BP1LA0JNW5 1464 aa13.57□□□□□ -0.24
SSBP2-205ENST00000505980 PTPN23Q9H3S7 1636 aa13.56□□□□□ -0.24
SSBP2-205ENST00000505980 TCOF1Q13428 1488 aaKnown RBP13.56□□□□□ -0.24
SSBP2-205ENST00000505980 MIA2Q96PC5 1412 aa13.55□□□□□ -0.24
SSBP2-205ENST00000505980 KIF14Q15058 1648 aa13.55□□□□□ -0.24
SSBP2-205ENST00000505980 FAM50AQ14320 339 aaKnown RBP13.54□□□□□ -0.24
SSBP2-205ENST00000505980 AMER1Q5JTC6 1135 aaPredicted RBP13.54□□□□□ -0.24
SSBP2-205ENST00000505980 PLEKHD1A6NEE1 506 aa13.52□□□□□ -0.25
SSBP2-205ENST00000505980 KDM5BQ9UGL1 1544 aa13.52□□□□□ -0.25
SSBP2-205ENST00000505980 ABCC10Q5T3U5 1492 aa13.51□□□□□ -0.25
SSBP2-205ENST00000505980 ITSN2Q9NZM3 1697 aa13.5□□□□□ -0.25
SSBP2-205ENST00000505980 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
SSBP2-205ENST00000505980 ZCCHC11Q5TAX3 1644 aaKnown RBP13.5□□□□□ -0.25
SSBP2-205ENST00000505980 GPATCH8Q9UKJ3 1502 aaKnown RBP13.49□□□□□ -0.25
SSBP2-205ENST00000505980 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
SSBP2-205ENST00000505980 ITGAEP38570 1179 aa13.49□□□□□ -0.25
SSBP2-205ENST00000505980 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
SSBP2-205ENST00000505980 PTPRKQ15262 1439 aa13.48□□□□□ -0.25
SSBP2-205ENST00000505980 CDC42BPAQ5VT25 1732 aa13.48□□□□□ -0.25
SSBP2-205ENST00000505980 CCER1Q8TC90 406 aaPredicted RBP13.48□□□□□ -0.25
SSBP2-205ENST00000505980 SETD5Q9C0A6 1442 aa13.45□□□□□ -0.26
SSBP2-205ENST00000505980 DNMT1P26358 1616 aaKnown RBP13.43□□□□□ -0.26
SSBP2-205ENST00000505980 RAB3GAP2Q9H2M9 1393 aa13.43□□□□□ -0.26
SSBP2-205ENST00000505980 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
SSBP2-205ENST00000505980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.42□□□□□ -0.26
SSBP2-205ENST00000505980 CAMSAP2Q08AD1 1489 aa13.42□□□□□ -0.26
SSBP2-205ENST00000505980 PREX2Q70Z35 1606 aa13.42□□□□□ -0.26
SSBP2-205ENST00000505980 HFM1A2PYH4 1435 aa13.41□□□□□ -0.26
SSBP2-205ENST00000505980 CFDP1Q9UEE9 299 aaPredicted RBP13.41□□□□□ -0.26
SSBP2-205ENST00000505980 CDC42BPBQ9Y5S2 1711 aa13.41□□□□□ -0.26
SSBP2-205ENST00000505980 TTC37Q6PGP7 1564 aa13.41□□□□□ -0.26
SSBP2-205ENST00000505980 DAPK1P53355 1430 aa13.41□□□□□ -0.26
SSBP2-205ENST00000505980 DHX57Q6P158 1386 aaKnown RBP13.4□□□□□ -0.26
SSBP2-205ENST00000505980 ZNF644Q9H582 1327 aaPredicted RBP13.4□□□□□ -0.26
SSBP2-205ENST00000505980 SLC24A1O60721 1099 aa13.4□□□□□ -0.26
SSBP2-205ENST00000505980 TRHP20396 242 aaPredicted RBP13.4□□□□□ -0.26
SSBP2-205ENST00000505980 AKNAQ7Z591 1439 aa13.4□□□□□ -0.26
SSBP2-205ENST00000505980 ABCC5O15440 1437 aa13.39□□□□□ -0.27
SSBP2-205ENST00000505980 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
SSBP2-205ENST00000505980 NAIPQ13075 1403 aa13.38□□□□□ -0.27
SSBP2-205ENST00000505980 GCC2Q8IWJ2 1684 aa13.38□□□□□ -0.27
SSBP2-205ENST00000505980 MYO5CQ9NQX4 1742 aa13.37□□□□□ -0.27
SSBP2-205ENST00000505980 CROCC2H7BZ55 1655 aa13.37□□□□□ -0.27
SSBP2-205ENST00000505980 WDR7Q9Y4E6 1490 aa13.37□□□□□ -0.27
SSBP2-205ENST00000505980 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
SSBP2-205ENST00000505980 ROCK1Q13464 1354 aa13.36□□□□□ -0.27
SSBP2-205ENST00000505980 CLSPNQ9HAW4 1339 aa13.36□□□□□ -0.27
SSBP2-205ENST00000505980 SAMD9LQ8IVG5 1584 aa13.35□□□□□ -0.27
SSBP2-205ENST00000505980 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
SSBP2-205ENST00000505980 CAPN15O75808 1086 aa13.34□□□□□ -0.27
SSBP2-205ENST00000505980 RIMBP3CA6NJZ7 1639 aa13.34□□□□□ -0.27
SSBP2-205ENST00000505980 RIMBP3BA6NNM3 1639 aa13.34□□□□□ -0.27
SSBP2-205ENST00000505980 RIMBP3Q9UFD9 1639 aa13.34□□□□□ -0.27
SSBP2-205ENST00000505980 ARHGEF5Q12774 1597 aa13.34□□□□□ -0.27
SSBP2-205ENST00000505980 ADGBQ8N7X0 1667 aa13.33□□□□□ -0.28
SSBP2-205ENST00000505980 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
SSBP2-205ENST00000505980 POLA2Q14181 598 aa13.33□□□□□ -0.28
SSBP2-205ENST00000505980 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
SSBP2-205ENST00000505980 ZNF777Q9ULD5 760 aaPredicted RBP13.33□□□□□ -0.28
SSBP2-205ENST00000505980 MBD5Q9P267 1494 aa13.33□□□□□ -0.28
SSBP2-205ENST00000505980 ABCA9Q8IUA7 1624 aa13.32□□□□□ -0.28
SSBP2-205ENST00000505980 ARAP3Q8WWN8 1544 aa13.32□□□□□ -0.28
SSBP2-205ENST00000505980 PLCH2O75038 1416 aa13.32□□□□□ -0.28
SSBP2-205ENST00000505980 ADGRL2O95490 1459 aa13.32□□□□□ -0.28
SSBP2-205ENST00000505980 SHANK2Q9UPX8 1470 aa13.32□□□□□ -0.28
SSBP2-205ENST00000505980 CHIC2Q9UKJ5 165 aa13.32□□□□□ -0.28
SSBP2-205ENST00000505980 ARHGAP5Q13017 1502 aa13.32□□□□□ -0.28
SSBP2-205ENST00000505980 MAPKBP1O60336 1514 aa13.3□□□□□ -0.28
SSBP2-205ENST00000505980 SPDYE4A6NLX3 237 aa13.3□□□□□ -0.28
SSBP2-205ENST00000505980 KDM6BO15054 1643 aa13.3□□□□□ -0.28
SSBP2-205ENST00000505980 RRP7BPQ9NSQ0 103 aa13.29□□□□□ -0.28
SSBP2-205ENST00000505980 NCOA1Q15788 1441 aa13.29□□□□□ -0.28
SSBP2-205ENST00000505980 KIAA1107Q9UPP5 1409 aa13.29□□□□□ -0.28
SSBP2-205ENST00000505980 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
SSBP2-205ENST00000505980 PLEKHH2Q8IVE3 1493 aa13.28□□□□□ -0.28
SSBP2-205ENST00000505980 SYCP2Q9BX26 1530 aa13.27□□□□□ -0.28
SSBP2-205ENST00000505980 CCDC141Q6ZP82 1450 aa13.27□□□□□ -0.29
SSBP2-205ENST00000505980 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
SSBP2-205ENST00000505980 HNRNPMP52272 730 aaKnown RBP eCLIP13.26□□□□□ -0.291e-6■■■■□ 22.8
SSBP2-205ENST00000505980 RSPH4AQ5TD94 716 aa13.26□□□□□ -0.29
SSBP2-205ENST00000505980 MAST1Q9Y2H9 1570 aa13.26□□□□□ -0.29
SSBP2-205ENST00000505980 ABCC1P33527 1531 aa13.25□□□□□ -0.29
SSBP2-205ENST00000505980 ARHGEF12Q9NZN5 1544 aa13.25□□□□□ -0.29
SSBP2-205ENST00000505980 EFCAB2Q5VUJ9 269 aa13.24□□□□□ -0.29
SSBP2-205ENST00000505980 ANKRD30AQ9BXX3 1397 aa13.24□□□□□ -0.29
SSBP2-205ENST00000505980 CYB5RLQ6IPT4 315 aa13.23□□□□□ -0.29
SSBP2-205ENST00000505980 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
SSBP2-205ENST00000505980 TSPY4P0CV99 314 aa13.22□□□□□ -0.29
SSBP2-205ENST00000505980 TSPY10P0CW01 314 aa13.22□□□□□ -0.29
SSBP2-205ENST00000505980 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
SSBP2-205ENST00000505980 FANCAO15360 1455 aa13.2□□□□□ -0.3
SSBP2-205ENST00000505980 DENND4BO75064 1496 aaPredicted RBP13.2□□□□□ -0.3
SSBP2-205ENST00000505980 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
SSBP2-205ENST00000505980 PLXNC1O60486 1568 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms