RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 LRRIQ1Q96JM4 1722 aa20.63■□□□□ 0.89
ITGA3-206ENST00000505612 ARHGAP5Q13017 1502 aa20.63■□□□□ 0.89
ITGA3-206ENST00000505612 ADGRL1O94910 1474 aa20.62■□□□□ 0.89
ITGA3-206ENST00000505612 EHBP1L1Q8N3D4 1523 aa20.6■□□□□ 0.89
ITGA3-206ENST00000505612 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
ITGA3-206ENST00000505612 GPATCH8Q9UKJ3 1502 aaKnown RBP20.58■□□□□ 0.89
ITGA3-206ENST00000505612 ZNF777Q9ULD5 760 aaPredicted RBP20.58■□□□□ 0.89
ITGA3-206ENST00000505612 MYO5CQ9NQX4 1742 aa20.58■□□□□ 0.88
ITGA3-206ENST00000505612 MAGI2Q86UL8 1455 aa20.57■□□□□ 0.88
ITGA3-206ENST00000505612 TIAM1Q13009 1591 aa20.56■□□□□ 0.88
ITGA3-206ENST00000505612 LRRC9Q6ZRR7 1453 aa20.56■□□□□ 0.88
ITGA3-206ENST00000505612 PLEKHH2Q8IVE3 1493 aa20.55■□□□□ 0.88
ITGA3-206ENST00000505612 POGZQ7Z3K3 1410 aa20.54■□□□□ 0.88
ITGA3-206ENST00000505612 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
ITGA3-206ENST00000505612 AFAP1Q8N556 730 aa20.53■□□□□ 0.88
ITGA3-206ENST00000505612 ZNF518AQ6AHZ1 1483 aa20.53■□□□□ 0.88
ITGA3-206ENST00000505612 KIAA1107Q9UPP5 1409 aa20.53■□□□□ 0.88
ITGA3-206ENST00000505612 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
ITGA3-206ENST00000505612 RSPH4AQ5TD94 716 aa20.52■□□□□ 0.88
ITGA3-206ENST00000505612 MYT1LQ9UL68 1186 aa20.52■□□□□ 0.88
ITGA3-206ENST00000505612 NCOA2Q15596 1464 aa20.5■□□□□ 0.87
ITGA3-206ENST00000505612 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
ITGA3-206ENST00000505612 ARID4BQ4LE39 1312 aaPredicted RBP20.48■□□□□ 0.87
ITGA3-206ENST00000505612 HNRNPMP52272 730 aaKnown RBP eCLIP20.47■□□□□ 0.87
ITGA3-206ENST00000505612 ZMYM4Q5VZL5 1548 aa20.47■□□□□ 0.87
ITGA3-206ENST00000505612 KDM4FA0A1W2PPD8 638 aa20.46■□□□□ 0.87
ITGA3-206ENST00000505612 SUPT6HQ7KZ85 1726 aaKnown RBP20.46■□□□□ 0.87
ITGA3-206ENST00000505612 CDC42BPBQ9Y5S2 1711 aa20.44■□□□□ 0.86
ITGA3-206ENST00000505612 FRMPD1Q5SYB0 1578 aa20.44■□□□□ 0.86
ITGA3-206ENST00000505612 SPAG9O60271 1321 aaKnown RBP20.44■□□□□ 0.86
ITGA3-206ENST00000505612 MLH3Q9UHC1 1453 aa20.43■□□□□ 0.86
ITGA3-206ENST00000505612 CDC42BPAQ5VT25 1732 aa20.43■□□□□ 0.86
ITGA3-206ENST00000505612 RICTORQ6R327 1708 aa20.43■□□□□ 0.86
ITGA3-206ENST00000505612 ABCC1P33527 1531 aa20.43■□□□□ 0.86
ITGA3-206ENST00000505612 ZFYVE16Q7Z3T8 1539 aa20.43■□□□□ 0.86
ITGA3-206ENST00000505612 TRAPPC8Q9Y2L5 1435 aa20.42■□□□□ 0.86
ITGA3-206ENST00000505612 ATP10AO60312 1499 aa20.42■□□□□ 0.86
ITGA3-206ENST00000505612 ZNF644Q9H582 1327 aaPredicted RBP20.41■□□□□ 0.86
ITGA3-206ENST00000505612 MIA2Q96PC5 1412 aa20.41■□□□□ 0.86
ITGA3-206ENST00000505612 TSPY4P0CV99 314 aa20.4■□□□□ 0.86
ITGA3-206ENST00000505612 TSPY10P0CW01 314 aa20.4■□□□□ 0.86
ITGA3-206ENST00000505612 ARHGEF12Q9NZN5 1544 aa20.4■□□□□ 0.86
ITGA3-206ENST00000505612 ITSN2Q9NZM3 1697 aa20.38■□□□□ 0.85
ITGA3-206ENST00000505612 KDM5CP41229 1560 aa20.38■□□□□ 0.85
ITGA3-206ENST00000505612 ARHGEF40Q8TER5 1519 aa20.38■□□□□ 0.85
ITGA3-206ENST00000505612 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
ITGA3-206ENST00000505612 MYOM3Q5VTT5 1437 aa20.37■□□□□ 0.85
ITGA3-206ENST00000505612 SAMD9LQ8IVG5 1584 aa20.37■□□□□ 0.85
ITGA3-206ENST00000505612 C9orf84Q5VXU9 1444 aa20.36■□□□□ 0.85
ITGA3-206ENST00000505612 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
ITGA3-206ENST00000505612 SYCP2Q9BX26 1530 aa20.34■□□□□ 0.85
ITGA3-206ENST00000505612 MBD5Q9P267 1494 aa20.34■□□□□ 0.85
ITGA3-206ENST00000505612 RTEL1-TNFRSF6BF6WH68 1400 aa20.33■□□□□ 0.84
ITGA3-206ENST00000505612 HECW2Q9P2P5 1572 aa20.31■□□□□ 0.84
ITGA3-206ENST00000505612 CAMSAP2Q08AD1 1489 aa20.3■□□□□ 0.84
ITGA3-206ENST00000505612 HRCP23327 699 aa20.3■□□□□ 0.84
ITGA3-206ENST00000505612 CCDC141Q6ZP82 1450 aa20.29■□□□□ 0.84
ITGA3-206ENST00000505612 ESF1Q9H501 851 aaKnown RBP20.28■□□□□ 0.84
ITGA3-206ENST00000505612 MLECQ14165 292 aa20.27■□□□□ 0.84
ITGA3-206ENST00000505612 REREQ9P2R6 1566 aa20.25■□□□□ 0.83
ITGA3-206ENST00000505612 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
ITGA3-206ENST00000505612 FGD6Q6ZV73 1430 aa20.25■□□□□ 0.83
ITGA3-206ENST00000505612 AGLP35573 1532 aa20.23■□□□□ 0.83
ITGA3-206ENST00000505612 ATP7AQ04656 1500 aa20.23■□□□□ 0.83
ITGA3-206ENST00000505612 ARHGEF5Q12774 1597 aa20.23■□□□□ 0.83
ITGA3-206ENST00000505612 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.22■□□□□ 0.83
ITGA3-206ENST00000505612 DIP2CQ9Y2E4 1556 aa20.22■□□□□ 0.83
ITGA3-206ENST00000505612 DHX29Q7Z478 1369 aaKnown RBP20.21■□□□□ 0.83
ITGA3-206ENST00000505612 A2MP01023 1474 aa20.21■□□□□ 0.83
ITGA3-206ENST00000505612 KIDINS220Q9ULH0 1771 aa20.19■□□□□ 0.82
ITGA3-206ENST00000505612 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
ITGA3-206ENST00000505612 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
ITGA3-206ENST00000505612 BCORL1Q5H9F3 1711 aa20.19■□□□□ 0.82
ITGA3-206ENST00000505612 PTPRMP28827 1452 aa20.18■□□□□ 0.82
ITGA3-206ENST00000505612 TCOF1Q13428 1488 aaKnown RBP20.18■□□□□ 0.82
ITGA3-206ENST00000505612 INO80Q9ULG1 1556 aaPredicted RBP20.17■□□□□ 0.82
ITGA3-206ENST00000505612 ABCA6Q8N139 1617 aa20.17■□□□□ 0.82
ITGA3-206ENST00000505612 ADAMTSL3P82987 1691 aa20.17■□□□□ 0.82
ITGA3-206ENST00000505612 PTPN23Q9H3S7 1636 aa20.14■□□□□ 0.81
ITGA3-206ENST00000505612 CNTLNQ9NXG0 1405 aa20.14■□□□□ 0.81
ITGA3-206ENST00000505612 GGT6Q6P531 493 aa20.14■□□□□ 0.81
ITGA3-206ENST00000505612 ABCC5O15440 1437 aa20.13■□□□□ 0.81
ITGA3-206ENST00000505612 KIF3BO15066 747 aa20.13■□□□□ 0.81
ITGA3-206ENST00000505612 SHANK2Q9UPX8 1470 aa20.11■□□□□ 0.81
ITGA3-206ENST00000505612 ANKRD30AQ9BXX3 1397 aa20.11■□□□□ 0.81
ITGA3-206ENST00000505612 DAPK1P53355 1430 aa20.1■□□□□ 0.81
ITGA3-206ENST00000505612 MAST1Q9Y2H9 1570 aa20.1■□□□□ 0.81
ITGA3-206ENST00000505612 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
ITGA3-206ENST00000505612 ADGBQ8N7X0 1667 aa20.08■□□□□ 0.81
ITGA3-206ENST00000505612 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
ITGA3-206ENST00000505612 PLXNC1O60486 1568 aa20.08■□□□□ 0.8
ITGA3-206ENST00000505612 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
ITGA3-206ENST00000505612 KIF15Q9NS87 1388 aa20.06■□□□□ 0.8
ITGA3-206ENST00000505612 WASHC2CQ9Y4E1 1318 aa20.05■□□□□ 0.8
ITGA3-206ENST00000505612 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
ITGA3-206ENST00000505612 SIGLEC1Q9BZZ2 1709 aa20.04■□□□□ 0.8
ITGA3-206ENST00000505612 DUOX2Q9NRD8 1548 aa20.03■□□□□ 0.8
ITGA3-206ENST00000505612 ZMYM3Q14202 1370 aa20.03■□□□□ 0.8
ITGA3-206ENST00000505612 NCOA1Q15788 1441 aa20.02■□□□□ 0.8
ITGA3-206ENST00000505612 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms