RNA–Protein interactions for RNA: ENST00000505526.1

PDCD6-203, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-203ENST00000505526 PLCH2O75038 1416 aa25.62■■□□□ 1.69
PDCD6-203ENST00000505526 SCAPERQ9BY12 1400 aa25.62■■□□□ 1.69
PDCD6-203ENST00000505526 FER1L4A9Z1Z3 1794 aa25.57■■□□□ 1.68
PDCD6-203ENST00000505526 ATP1B4Q9UN42 357 aaPredicted RBP25.53■■□□□ 1.68
PDCD6-203ENST00000505526 ATP10AO60312 1499 aa25.53■■□□□ 1.68
PDCD6-203ENST00000505526 EFCAB2Q5VUJ9 269 aa25.53■■□□□ 1.68
PDCD6-203ENST00000505526 CERKQ8TCT0 537 aa25.52■■□□□ 1.68
PDCD6-203ENST00000505526 C9orf84Q5VXU9 1444 aa25.51■■□□□ 1.67
PDCD6-203ENST00000505526 ARHGEF12Q9NZN5 1544 aa25.5■■□□□ 1.67
PDCD6-203ENST00000505526 MYO5CQ9NQX4 1742 aa25.49■■□□□ 1.67
PDCD6-203ENST00000505526 FMN1Q68DA7 1419 aa25.49■■□□□ 1.67
PDCD6-203ENST00000505526 CDK11AQ9UQ88 783 aaPredicted RBP25.48■■□□□ 1.67
PDCD6-203ENST00000505526 UBTFP17480 764 aaKnown RBP25.47■■□□□ 1.67
PDCD6-203ENST00000505526 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
PDCD6-203ENST00000505526 CEBPAP49715 358 aaPredicted RBP25.45■■□□□ 1.66
PDCD6-203ENST00000505526 KIF14Q15058 1648 aa25.44■■□□□ 1.66
PDCD6-203ENST00000505526 PREX1Q8TCU6 1659 aa25.44■■□□□ 1.66
PDCD6-203ENST00000505526 ZNF518AQ6AHZ1 1483 aa25.43■■□□□ 1.66
PDCD6-203ENST00000505526 ARHGAP35Q9NRY4 1499 aa25.43■■□□□ 1.66
PDCD6-203ENST00000505526 AFAP1Q8N556 730 aa25.4■■□□□ 1.66
PDCD6-203ENST00000505526 ARHGAP5Q13017 1502 aa25.4■■□□□ 1.66
PDCD6-203ENST00000505526 TROQ12816 1431 aaPredicted RBP25.4■■□□□ 1.66
PDCD6-203ENST00000505526 KDM5CP41229 1560 aa25.38■■□□□ 1.65
PDCD6-203ENST00000505526 MYT1LQ9UL68 1186 aa25.38■■□□□ 1.65
PDCD6-203ENST00000505526 CLIP1P30622 1438 aa25.37■■□□□ 1.65
PDCD6-203ENST00000505526 LOC105371045A0A1W2PR82 267 aa25.36■■□□□ 1.65
PDCD6-203ENST00000505526 DMRT2Q9Y5R5 561 aa25.34■■□□□ 1.65
PDCD6-203ENST00000505526 DIP2CQ9Y2E4 1556 aa25.33■■□□□ 1.65
PDCD6-203ENST00000505526 UHRF1BP1Q6BDS2 1440 aa25.33■■□□□ 1.65
PDCD6-203ENST00000505526 STRCQ7RTU9 1775 aa25.31■■□□□ 1.64
PDCD6-203ENST00000505526 REREQ9P2R6 1566 aa25.3■■□□□ 1.64
PDCD6-203ENST00000505526 LRRIQ1Q96JM4 1722 aa25.3■■□□□ 1.64
PDCD6-203ENST00000505526 MLH3Q9UHC1 1453 aa25.29■■□□□ 1.64
PDCD6-203ENST00000505526 CDC42BPBQ9Y5S2 1711 aa25.28■■□□□ 1.64
PDCD6-203ENST00000505526 ABCA6Q8N139 1617 aa25.28■■□□□ 1.64
PDCD6-203ENST00000505526 SETD1BQ9UPS6 1966 aaKnown RBP25.26■■□□□ 1.63
PDCD6-203ENST00000505526 TRAPPC8Q9Y2L5 1435 aa25.24■■□□□ 1.63
PDCD6-203ENST00000505526 ESF1Q9H501 851 aaKnown RBP25.24■■□□□ 1.63
PDCD6-203ENST00000505526 C3P01024 1663 aa25.23■■□□□ 1.63
PDCD6-203ENST00000505526 PREX2Q70Z35 1606 aa25.23■■□□□ 1.63
PDCD6-203ENST00000505526 ABCC1P33527 1531 aa25.23■■□□□ 1.63
PDCD6-203ENST00000505526 AGLP35573 1532 aa25.23■■□□□ 1.63
PDCD6-203ENST00000505526 PTPRTO14522 1441 aa25.2■■□□□ 1.62
PDCD6-203ENST00000505526 ITSN2Q9NZM3 1697 aa25.19■■□□□ 1.62
PDCD6-203ENST00000505526 CCDC18Q5T9S5 1454 aa25.18■■□□□ 1.62
PDCD6-203ENST00000505526 CASKIN1Q8WXD9 1431 aa25.17■■□□□ 1.62
PDCD6-203ENST00000505526 DISP3Q9P2K9 1392 aa25.17■■□□□ 1.62
PDCD6-203ENST00000505526 KIDINS220Q9ULH0 1771 aa25.15■■□□□ 1.62
PDCD6-203ENST00000505526 CNTLNQ9NXG0 1405 aa25.14■■□□□ 1.61
PDCD6-203ENST00000505526 CDC42BPAQ5VT25 1732 aa25.12■■□□□ 1.61
PDCD6-203ENST00000505526 ILDR2Q71H61 639 aa25.11■■□□□ 1.61
PDCD6-203ENST00000505526 NCOA1Q15788 1441 aa25.1■■□□□ 1.61
PDCD6-203ENST00000505526 ZNF777Q9ULD5 760 aaPredicted RBP25.09■■□□□ 1.61
PDCD6-203ENST00000505526 LTBP4Q8N2S1 1624 aa25.09■■□□□ 1.61
PDCD6-203ENST00000505526 SAMD9LQ8IVG5 1584 aa25.08■■□□□ 1.61
PDCD6-203ENST00000505526 NPATQ14207 1427 aa25.05■■□□□ 1.6
PDCD6-203ENST00000505526 FYCO1Q9BQS8 1478 aa25.05■■□□□ 1.6
PDCD6-203ENST00000505526 SPAG9O60271 1321 aaKnown RBP25.05■■□□□ 1.6
PDCD6-203ENST00000505526 MROH2AA6NES4 1674 aa25.04■■□□□ 1.6
PDCD6-203ENST00000505526 SYCP2Q9BX26 1530 aa25.03■■□□□ 1.6
PDCD6-203ENST00000505526 ZMYM3Q14202 1370 aa25.03■■□□□ 1.6
PDCD6-203ENST00000505526 CAMSAP1Q5T5Y3 1602 aa25.03■■□□□ 1.6
PDCD6-203ENST00000505526 SOCS7O14512 581 aa25.02■■□□□ 1.6
PDCD6-203ENST00000505526 IQSEC2Q5JU85 1478 aa25.02■■□□□ 1.6
PDCD6-203ENST00000505526 CEP162Q5TB80 1403 aa25.02■■□□□ 1.6
PDCD6-203ENST00000505526 GPATCH8Q9UKJ3 1502 aaKnown RBP25.02■■□□□ 1.6
PDCD6-203ENST00000505526 HNRNPMP52272 730 aaKnown RBP eCLIP25.02■■□□□ 1.62e-7■■■■■ 37.9
PDCD6-203ENST00000505526 SUPT6HQ7KZ85 1726 aaKnown RBP24.99■■□□□ 1.59
PDCD6-203ENST00000505526 SPATA31D1Q6ZQQ2 1576 aa24.99■■□□□ 1.59
PDCD6-203ENST00000505526 ATP7AQ04656 1500 aa24.98■■□□□ 1.59
PDCD6-203ENST00000505526 NCKAP5LQ9HCH0 1330 aa24.96■■□□□ 1.59
PDCD6-203ENST00000505526 KIAA1107Q9UPP5 1409 aa24.96■■□□□ 1.59
PDCD6-203ENST00000505526 CFDP1Q9UEE9 299 aaPredicted RBP24.95■■□□□ 1.58
PDCD6-203ENST00000505526 CLTCQ00610 1675 aaKnown RBP24.94■■□□□ 1.58
PDCD6-203ENST00000505526 A2MP01023 1474 aa24.94■■□□□ 1.58
PDCD6-203ENST00000505526 PLEKHH2Q8IVE3 1493 aa24.94■■□□□ 1.58
PDCD6-203ENST00000505526 PLXNC1O60486 1568 aa24.93■■□□□ 1.58
PDCD6-203ENST00000505526 INO80Q9ULG1 1556 aaPredicted RBP24.93■■□□□ 1.58
PDCD6-203ENST00000505526 ZNF335Q9H4Z2 1342 aaPredicted RBP24.92■■□□□ 1.58
PDCD6-203ENST00000505526 GGT6Q6P531 493 aa24.91■■□□□ 1.58
PDCD6-203ENST00000505526 CCNB3Q8WWL7 1395 aa24.91■■□□□ 1.58
PDCD6-203ENST00000505526 MYO3AQ8NEV4 1616 aa24.91■■□□□ 1.58
PDCD6-203ENST00000505526 ZNF142P52746 1687 aaPredicted RBP24.9■■□□□ 1.58
PDCD6-203ENST00000505526 PTPRKQ15262 1439 aa24.9■■□□□ 1.58
PDCD6-203ENST00000505526 PKD2Q13563 968 aa24.89■■□□□ 1.58
PDCD6-203ENST00000505526 PLA2R1Q13018 1463 aa24.89■■□□□ 1.57
PDCD6-203ENST00000505526 CEP170BQ9Y4F5 1589 aaPredicted RBP24.88■■□□□ 1.57
PDCD6-203ENST00000505526 TCOF1Q13428 1488 aaKnown RBP24.85■■□□□ 1.57
PDCD6-203ENST00000505526 UBAP1LF5GYI3 381 aa24.85■■□□□ 1.57
PDCD6-203ENST00000505526 MTUS2Q5JR59 1369 aa24.85■■□□□ 1.57
PDCD6-203ENST00000505526 PPP6R1Q9UPN7 881 aa24.84■■□□□ 1.57
PDCD6-203ENST00000505526 ADGBQ8N7X0 1667 aa24.83■■□□□ 1.56
PDCD6-203ENST00000505526 ZNF644Q9H582 1327 aaPredicted RBP24.81■■□□□ 1.56
PDCD6-203ENST00000505526 MBD5Q9P267 1494 aa24.78■■□□□ 1.56
PDCD6-203ENST00000505526 TIAM1Q13009 1591 aa24.77■■□□□ 1.56
PDCD6-203ENST00000505526 A2ML1A8K2U0 1454 aa24.77■■□□□ 1.56
PDCD6-203ENST00000505526 RTEL1-TNFRSF6BF6WH68 1400 aa24.75■■□□□ 1.55
PDCD6-203ENST00000505526 DHX29Q7Z478 1369 aaKnown RBP24.74■■□□□ 1.55
PDCD6-203ENST00000505526 DNMT1P26358 1616 aaKnown RBP24.74■■□□□ 1.55
PDCD6-203ENST00000505526 EHBP1L1Q8N3D4 1523 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms