RNA–Protein interactions for RNA: ENST00000505221.5

PDCD6-202, Transcript of programmed cell death 6, humanhuman

TSL 3 BASIC

Gene PDCD6, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-202ENST00000505221 ARAP3Q8WWN8 1544 aa24.3■■□□□ 1.48
PDCD6-202ENST00000505221 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
PDCD6-202ENST00000505221 ITSN2Q9NZM3 1697 aa24.28■■□□□ 1.48
PDCD6-202ENST00000505221 TSPOAP1O95153 1857 aa24.28■■□□□ 1.48
PDCD6-202ENST00000505221 PREX2Q70Z35 1606 aa24.27■■□□□ 1.48
PDCD6-202ENST00000505221 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
PDCD6-202ENST00000505221 NEO1Q92859 1461 aa24.26■■□□□ 1.47
PDCD6-202ENST00000505221 FAM50AQ14320 339 aaKnown RBP24.26■■□□□ 1.47
PDCD6-202ENST00000505221 AKNAQ7Z591 1439 aa24.26■■□□□ 1.47
PDCD6-202ENST00000505221 FGD6Q6ZV73 1430 aa24.25■■□□□ 1.47
PDCD6-202ENST00000505221 ZNF644Q9H582 1327 aaPredicted RBP24.24■■□□□ 1.47
PDCD6-202ENST00000505221 CFAP74Q9C0B2 1584 aa24.23■■□□□ 1.47
PDCD6-202ENST00000505221 CDC42BPBQ9Y5S2 1711 aa24.23■■□□□ 1.47
PDCD6-202ENST00000505221 PLEKHH2Q8IVE3 1493 aa24.21■■□□□ 1.47
PDCD6-202ENST00000505221 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.462e-7■■■■■ 37.9
PDCD6-202ENST00000505221 RSPH4AQ5TD94 716 aa24.2■■□□□ 1.46
PDCD6-202ENST00000505221 SCAPERQ9BY12 1400 aa24.19■■□□□ 1.46
PDCD6-202ENST00000505221 ADGRL1O94910 1474 aa24.19■■□□□ 1.46
PDCD6-202ENST00000505221 KIAA1107Q9UPP5 1409 aa24.18■■□□□ 1.46
PDCD6-202ENST00000505221 PPRC1Q5VV67 1664 aaKnown RBP24.17■■□□□ 1.46
PDCD6-202ENST00000505221 CAMSAP2Q08AD1 1489 aa24.16■■□□□ 1.46
PDCD6-202ENST00000505221 PTPN23Q9H3S7 1636 aa24.15■■□□□ 1.46
PDCD6-202ENST00000505221 RRBP1Q9P2E9 1410 aaKnown RBP24.14■■□□□ 1.45
PDCD6-202ENST00000505221 DENND4BO75064 1496 aaPredicted RBP24.13■■□□□ 1.45
PDCD6-202ENST00000505221 SAMD9LQ8IVG5 1584 aa24.13■■□□□ 1.45
PDCD6-202ENST00000505221 TSPY4P0CV99 314 aa24.13■■□□□ 1.45
PDCD6-202ENST00000505221 TSPY10P0CW01 314 aa24.13■■□□□ 1.45
PDCD6-202ENST00000505221 TCOF1Q13428 1488 aaKnown RBP24.13■■□□□ 1.45
PDCD6-202ENST00000505221 RAPGEF3O95398 923 aa24.12■■□□□ 1.45
PDCD6-202ENST00000505221 MYT1LQ9UL68 1186 aa24.12■■□□□ 1.45
PDCD6-202ENST00000505221 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.12■■□□□ 1.452e-7■■■■■ 43.8
PDCD6-202ENST00000505221 AFAP1Q8N556 730 aa24.11■■□□□ 1.45
PDCD6-202ENST00000505221 ABCC1P33527 1531 aa24.1■■□□□ 1.45
PDCD6-202ENST00000505221 ITGAEP38570 1179 aa24.09■■□□□ 1.45
PDCD6-202ENST00000505221 SYCP2Q9BX26 1530 aa24.08■■□□□ 1.45
PDCD6-202ENST00000505221 MBD5Q9P267 1494 aa24.07■■□□□ 1.44
PDCD6-202ENST00000505221 ARHGEF12Q9NZN5 1544 aa24.06■■□□□ 1.44
PDCD6-202ENST00000505221 TRAPPC8Q9Y2L5 1435 aa24.06■■□□□ 1.44
PDCD6-202ENST00000505221 ZNF518AQ6AHZ1 1483 aa24.06■■□□□ 1.44
PDCD6-202ENST00000505221 SPAG9O60271 1321 aaKnown RBP24.05■■□□□ 1.44
PDCD6-202ENST00000505221 POGZQ7Z3K3 1410 aa24.04■■□□□ 1.44
PDCD6-202ENST00000505221 CCDC141Q6ZP82 1450 aa24.03■■□□□ 1.44
PDCD6-202ENST00000505221 COL17A1Q9UMD9 1497 aaPredicted RBP24.03■■□□□ 1.44
PDCD6-202ENST00000505221 TRIM26Q12899 539 aaPredicted RBP24.03■■□□□ 1.44
PDCD6-202ENST00000505221 KDM6BO15054 1643 aa24.02■■□□□ 1.44
PDCD6-202ENST00000505221 ARHGEF5Q12774 1597 aa24.01■■□□□ 1.43
PDCD6-202ENST00000505221 ABCC5O15440 1437 aa24.01■■□□□ 1.43
PDCD6-202ENST00000505221 DAPK1P53355 1430 aa24.01■■□□□ 1.43
PDCD6-202ENST00000505221 CHIC2Q9UKJ5 165 aa23.99■■□□□ 1.43
PDCD6-202ENST00000505221 DNMT1P26358 1616 aaKnown RBP23.95■■□□□ 1.42
PDCD6-202ENST00000505221 RTEL1-TNFRSF6BF6WH68 1400 aa23.93■■□□□ 1.42
PDCD6-202ENST00000505221 C9orf84Q5VXU9 1444 aa23.93■■□□□ 1.42
PDCD6-202ENST00000505221 MAGI2Q86UL8 1455 aa23.93■■□□□ 1.42
PDCD6-202ENST00000505221 MLH3Q9UHC1 1453 aa23.93■■□□□ 1.42
PDCD6-202ENST00000505221 RICTORQ6R327 1708 aa23.92■■□□□ 1.42
PDCD6-202ENST00000505221 ANKRD30AQ9BXX3 1397 aa23.91■■□□□ 1.42
PDCD6-202ENST00000505221 SHANK2Q9UPX8 1470 aa23.91■■□□□ 1.42
PDCD6-202ENST00000505221 KDM5CP41229 1560 aa23.91■■□□□ 1.42
PDCD6-202ENST00000505221 RRP7BPQ9NSQ0 103 aa23.9■■□□□ 1.42
PDCD6-202ENST00000505221 FRMPD1Q5SYB0 1578 aa23.89■■□□□ 1.41
PDCD6-202ENST00000505221 ZMYM4Q5VZL5 1548 aa23.88■■□□□ 1.41
PDCD6-202ENST00000505221 PTPRKQ15262 1439 aa23.87■■□□□ 1.41
PDCD6-202ENST00000505221 HECW2Q9P2P5 1572 aa23.86■■□□□ 1.41
PDCD6-202ENST00000505221 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
PDCD6-202ENST00000505221 ROCK1Q13464 1354 aa23.86■■□□□ 1.41
PDCD6-202ENST00000505221 MAST1Q9Y2H9 1570 aa23.86■■□□□ 1.41
PDCD6-202ENST00000505221 NCOA1Q15788 1441 aa23.84■■□□□ 1.41
PDCD6-202ENST00000505221 ZFYVE16Q7Z3T8 1539 aa23.84■■□□□ 1.41
PDCD6-202ENST00000505221 YEATS2Q9ULM3 1422 aa23.82■■□□□ 1.4
PDCD6-202ENST00000505221 CROCC2H7BZ55 1655 aa23.82■■□□□ 1.4
PDCD6-202ENST00000505221 KIF15Q9NS87 1388 aa23.81■■□□□ 1.4
PDCD6-202ENST00000505221 INO80Q9ULG1 1556 aaPredicted RBP23.81■■□□□ 1.4
PDCD6-202ENST00000505221 ATP10AO60312 1499 aa23.81■■□□□ 1.4
PDCD6-202ENST00000505221 ADGRL2O95490 1459 aa23.81■■□□□ 1.4
PDCD6-202ENST00000505221 KIDINS220Q9ULH0 1771 aa23.79■■□□□ 1.4
PDCD6-202ENST00000505221 PCGF6Q9BYE7 350 aa23.78■■□□□ 1.4
PDCD6-202ENST00000505221 DHX29Q7Z478 1369 aaKnown RBP23.78■■□□□ 1.4
PDCD6-202ENST00000505221 ARID4BQ4LE39 1312 aaPredicted RBP23.77■■□□□ 1.4
PDCD6-202ENST00000505221 A2MP01023 1474 aa23.76■■□□□ 1.39
PDCD6-202ENST00000505221 PLXNC1O60486 1568 aa23.74■■□□□ 1.39
PDCD6-202ENST00000505221 ADGBQ8N7X0 1667 aa23.74■■□□□ 1.39
PDCD6-202ENST00000505221 DUOX2Q9NRD8 1548 aa23.74■■□□□ 1.39
PDCD6-202ENST00000505221 DIP2CQ9Y2E4 1556 aa23.74■■□□□ 1.39
PDCD6-202ENST00000505221 ARHGEF40Q8TER5 1519 aa23.73■■□□□ 1.39
PDCD6-202ENST00000505221 KIF3BO15066 747 aa23.72■■□□□ 1.39
PDCD6-202ENST00000505221 ABCA6Q8N139 1617 aa23.72■■□□□ 1.39
PDCD6-202ENST00000505221 HFM1A2PYH4 1435 aa23.71■■□□□ 1.39
PDCD6-202ENST00000505221 ANKRD50Q9ULJ7 1429 aa23.71■■□□□ 1.39
PDCD6-202ENST00000505221 NAIPQ13075 1403 aa23.69■■□□□ 1.38
PDCD6-202ENST00000505221 ERBINQ96RT1 1412 aa23.68■■□□□ 1.38
PDCD6-202ENST00000505221 SETD5Q9C0A6 1442 aa23.68■■□□□ 1.38
PDCD6-202ENST00000505221 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
PDCD6-202ENST00000505221 GGT6Q6P531 493 aa23.66■■□□□ 1.38
PDCD6-202ENST00000505221 REREQ9P2R6 1566 aa23.65■■□□□ 1.38
PDCD6-202ENST00000505221 MLECQ14165 292 aa23.64■■□□□ 1.37
PDCD6-202ENST00000505221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.63■■□□□ 1.379e-7■■■■□ 21.2
PDCD6-202ENST00000505221 TRIM52Q96A61 297 aa23.62■■□□□ 1.37
PDCD6-202ENST00000505221 AGLP35573 1532 aa23.62■■□□□ 1.37
PDCD6-202ENST00000505221 HRCP23327 699 aa23.61■■□□□ 1.37
PDCD6-202ENST00000505221 ESF1Q9H501 851 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms