RNA–Protein interactions for RNA: ENST00000504867.5

CDV3-205, Transcript of CDV3 homolog, humanhuman

TSL 3

Gene CDV3, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-205ENST00000504867 ARHGAP35Q9NRY4 1499 aa29.46■■■□□ 2.31
CDV3-205ENST00000504867 UBTFP17480 764 aaKnown RBP29.45■■■□□ 2.31
CDV3-205ENST00000504867 EHMT2Q96KQ7 1210 aa29.45■■■□□ 2.31
CDV3-205ENST00000504867 KIF14Q15058 1648 aa29.42■■■□□ 2.3
CDV3-205ENST00000504867 FER1L4A9Z1Z3 1794 aa29.41■■■□□ 2.3
CDV3-205ENST00000504867 FMN1Q68DA7 1419 aa29.41■■■□□ 2.3
CDV3-205ENST00000504867 MYO5CQ9NQX4 1742 aa29.4■■■□□ 2.3
CDV3-205ENST00000504867 MLECQ14165 292 aa29.4■■■□□ 2.3
CDV3-205ENST00000504867 PLPPR3Q6T4P5 718 aa29.4■■■□□ 2.3
CDV3-205ENST00000504867 ATP10AO60312 1499 aa29.39■■■□□ 2.3
CDV3-205ENST00000504867 ARHGEF12Q9NZN5 1544 aa29.39■■■□□ 2.3
CDV3-205ENST00000504867 LRRIQ1Q96JM4 1722 aa29.35■■■□□ 2.29
CDV3-205ENST00000504867 EFCAB2Q5VUJ9 269 aa29.35■■■□□ 2.29
CDV3-205ENST00000504867 C9orf84Q5VXU9 1444 aa29.34■■■□□ 2.29
CDV3-205ENST00000504867 ATP1B4Q9UN42 357 aaPredicted RBP29.33■■■□□ 2.29
CDV3-205ENST00000504867 TROQ12816 1431 aaPredicted RBP29.32■■■□□ 2.28
CDV3-205ENST00000504867 KDM5CP41229 1560 aa29.3■■■□□ 2.28
CDV3-205ENST00000504867 CDK11AQ9UQ88 783 aaPredicted RBP29.28■■■□□ 2.28
CDV3-205ENST00000504867 ZNF518AQ6AHZ1 1483 aa29.28■■■□□ 2.28
CDV3-205ENST00000504867 AFAP1Q8N556 730 aa29.27■■■□□ 2.28
CDV3-205ENST00000504867 ARHGAP5Q13017 1502 aa29.25■■■□□ 2.27
CDV3-205ENST00000504867 CEBPAP49715 358 aaPredicted RBP29.24■■■□□ 2.27
CDV3-205ENST00000504867 CDC42BPBQ9Y5S2 1711 aa29.24■■■□□ 2.27
CDV3-205ENST00000504867 PREX1Q8TCU6 1659 aa29.23■■■□□ 2.27
CDV3-205ENST00000504867 DIP2CQ9Y2E4 1556 aa29.22■■■□□ 2.27
CDV3-205ENST00000504867 CERKQ8TCT0 537 aa29.19■■■□□ 2.26
CDV3-205ENST00000504867 CLIP1P30622 1438 aa29.19■■■□□ 2.26
CDV3-205ENST00000504867 REREQ9P2R6 1566 aa29.18■■■□□ 2.26
CDV3-205ENST00000504867 ABCA6Q8N139 1617 aa29.17■■■□□ 2.26
CDV3-205ENST00000504867 STRCQ7RTU9 1775 aa29.16■■■□□ 2.26
CDV3-205ENST00000504867 MLH3Q9UHC1 1453 aa29.16■■■□□ 2.26
CDV3-205ENST00000504867 TRAPPC8Q9Y2L5 1435 aa29.14■■■□□ 2.26
CDV3-205ENST00000504867 PREX2Q70Z35 1606 aa29.14■■■□□ 2.26
CDV3-205ENST00000504867 ABCC1P33527 1531 aa29.13■■■□□ 2.25
CDV3-205ENST00000504867 CASKIN1Q8WXD9 1431 aa29.11■■■□□ 2.25
CDV3-205ENST00000504867 SETD1BQ9UPS6 1966 aaKnown RBP29.11■■■□□ 2.25
CDV3-205ENST00000504867 ITSN2Q9NZM3 1697 aa29.09■■■□□ 2.25
CDV3-205ENST00000504867 AGLP35573 1532 aa29.09■■■□□ 2.25
CDV3-205ENST00000504867 C3P01024 1663 aa29.08■■■□□ 2.25
CDV3-205ENST00000504867 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
CDV3-205ENST00000504867 CDC42BPAQ5VT25 1732 aa29.06■■■□□ 2.24
CDV3-205ENST00000504867 CCDC18Q5T9S5 1454 aa29.06■■■□□ 2.24
CDV3-205ENST00000504867 UHRF1BP1Q6BDS2 1440 aa29.05■■■□□ 2.24
CDV3-205ENST00000504867 MYT1LQ9UL68 1186 aa29.03■■■□□ 2.24
CDV3-205ENST00000504867 DMRT2Q9Y5R5 561 aa28.97■■■□□ 2.23
CDV3-205ENST00000504867 SAMD9LQ8IVG5 1584 aa28.96■■■□□ 2.23
CDV3-205ENST00000504867 FYCO1Q9BQS8 1478 aa28.95■■■□□ 2.22
CDV3-205ENST00000504867 GPATCH8Q9UKJ3 1502 aaKnown RBP28.93■■■□□ 2.22
CDV3-205ENST00000504867 PTPRTO14522 1441 aa28.93■■■□□ 2.22
CDV3-205ENST00000504867 SYCP2Q9BX26 1530 aa28.89■■■□□ 2.22
CDV3-205ENST00000504867 CNTLNQ9NXG0 1405 aa28.89■■■□□ 2.22
CDV3-205ENST00000504867 LTBP4Q8N2S1 1624 aa28.87■■■□□ 2.21
CDV3-205ENST00000504867 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
CDV3-205ENST00000504867 ESF1Q9H501 851 aaKnown RBP28.85■■■□□ 2.21
CDV3-205ENST00000504867 ZNF777Q9ULD5 760 aaPredicted RBP28.85■■■□□ 2.21
CDV3-205ENST00000504867 MROH2AA6NES4 1674 aa28.84■■■□□ 2.21
CDV3-205ENST00000504867 HNRNPMP52272 730 aaKnown RBP eCLIP28.84■■■□□ 2.212e-6■□□□□ 10.3
CDV3-205ENST00000504867 SUPT6HQ7KZ85 1726 aaKnown RBP28.81■■■□□ 2.2
CDV3-205ENST00000504867 PLXNC1O60486 1568 aa28.81■■■□□ 2.2
CDV3-205ENST00000504867 NPATQ14207 1427 aa28.81■■■□□ 2.2
CDV3-205ENST00000504867 KIAA1107Q9UPP5 1409 aa28.81■■■□□ 2.2
CDV3-205ENST00000504867 SPAG9O60271 1321 aaKnown RBP28.81■■■□□ 2.2
CDV3-205ENST00000504867 INO80Q9ULG1 1556 aaPredicted RBP28.8■■■□□ 2.2
CDV3-205ENST00000504867 ZMYM3Q14202 1370 aa28.8■■■□□ 2.2
CDV3-205ENST00000504867 ATP7AQ04656 1500 aa28.79■■■□□ 2.2
CDV3-205ENST00000504867 CEP162Q5TB80 1403 aa28.79■■■□□ 2.2
CDV3-205ENST00000504867 CAMSAP1Q5T5Y3 1602 aa28.76■■■□□ 2.2
CDV3-205ENST00000504867 CLTCQ00610 1675 aaKnown RBP28.74■■■□□ 2.19
CDV3-205ENST00000504867 LOC105371045A0A1W2PR82 267 aa28.74■■■□□ 2.19
CDV3-205ENST00000504867 A2MP01023 1474 aa28.73■■■□□ 2.19
CDV3-205ENST00000504867 PLEKHH2Q8IVE3 1493 aa28.73■■■□□ 2.19
CDV3-205ENST00000504867 CFDP1Q9UEE9 299 aaPredicted RBP28.73■■■□□ 2.19
CDV3-205ENST00000504867 ILDR2Q71H61 639 aa28.72■■■□□ 2.19
CDV3-205ENST00000504867 CCNB3Q8WWL7 1395 aa28.7■■■□□ 2.18
CDV3-205ENST00000504867 IQSEC2Q5JU85 1478 aa28.7■■■□□ 2.18
CDV3-205ENST00000504867 PTPRKQ15262 1439 aa28.69■■■□□ 2.18
CDV3-205ENST00000504867 ZNF142P52746 1687 aaPredicted RBP28.68■■■□□ 2.18
CDV3-205ENST00000504867 DISP3Q9P2K9 1392 aa28.68■■■□□ 2.18
CDV3-205ENST00000504867 MYO3AQ8NEV4 1616 aa28.68■■■□□ 2.18
CDV3-205ENST00000504867 ZNF644Q9H582 1327 aaPredicted RBP28.67■■■□□ 2.18
CDV3-205ENST00000504867 NCKAP5LQ9HCH0 1330 aa28.67■■■□□ 2.18
CDV3-205ENST00000504867 MBD5Q9P267 1494 aa28.66■■■□□ 2.18
CDV3-205ENST00000504867 TIAM1Q13009 1591 aa28.66■■■□□ 2.18
CDV3-205ENST00000504867 ADGBQ8N7X0 1667 aa28.64■■■□□ 2.17
CDV3-205ENST00000504867 MTUS2Q5JR59 1369 aa28.63■■■□□ 2.17
CDV3-205ENST00000504867 CEP170BQ9Y4F5 1589 aaPredicted RBP28.63■■■□□ 2.17
CDV3-205ENST00000504867 PLA2R1Q13018 1463 aa28.62■■■□□ 2.17
CDV3-205ENST00000504867 TCOF1Q13428 1488 aaKnown RBP28.62■■■□□ 2.17
CDV3-205ENST00000504867 GGT6Q6P531 493 aa28.62■■■□□ 2.17
CDV3-205ENST00000504867 ZNF335Q9H4Z2 1342 aaPredicted RBP28.6■■■□□ 2.17
CDV3-205ENST00000504867 PPP6R1Q9UPN7 881 aa28.57■■■□□ 2.16
CDV3-205ENST00000504867 EHBP1L1Q8N3D4 1523 aa28.57■■■□□ 2.16
CDV3-205ENST00000504867 SPATA31D1Q6ZQQ2 1576 aa28.56■■■□□ 2.16
CDV3-205ENST00000504867 RTEL1-TNFRSF6BF6WH68 1400 aa28.55■■■□□ 2.16
CDV3-205ENST00000504867 PKD2Q13563 968 aa28.55■■■□□ 2.16
CDV3-205ENST00000504867 DHX29Q7Z478 1369 aaKnown RBP28.51■■■□□ 2.16
CDV3-205ENST00000504867 SOCS7O14512 581 aa28.51■■■□□ 2.15
CDV3-205ENST00000504867 DNMT1P26358 1616 aaKnown RBP28.51■■■□□ 2.15
CDV3-205ENST00000504867 A2ML1A8K2U0 1454 aa28.49■■■□□ 2.15
CDV3-205ENST00000504867 VPS8Q8N3P4 1428 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms