RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 P3H3Q8IVL6 736 aa15.42■□□□□ 0.06
DHFR-202ENST00000504396 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
DHFR-202ENST00000504396 SPDYE2BA6NHP3 402 aa15.41■□□□□ 0.06
DHFR-202ENST00000504396 SPDYE6P0CI01 402 aa15.41■□□□□ 0.06
DHFR-202ENST00000504396 SPDYE2Q495Y8 402 aa15.41■□□□□ 0.06
DHFR-202ENST00000504396 ATP10BO94823 1461 aa15.35■□□□□ 0.05
DHFR-202ENST00000504396 ARAP3Q8WWN8 1544 aa15.35■□□□□ 0.05
DHFR-202ENST00000504396 ABCA9Q8IUA7 1624 aa15.35■□□□□ 0.05
DHFR-202ENST00000504396 RAPGEF6Q8TEU7 1601 aa15.33■□□□□ 0.04
DHFR-202ENST00000504396 PHLDB1Q86UU1 1377 aa15.32■□□□□ 0.04
DHFR-202ENST00000504396 RANGAP1P46060 587 aaPredicted RBP15.32■□□□□ 0.04
DHFR-202ENST00000504396 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
DHFR-202ENST00000504396 SAMD9Q5K651 1589 aa15.3■□□□□ 0.04
DHFR-202ENST00000504396 RAPGEF3O95398 923 aa15.3■□□□□ 0.04
DHFR-202ENST00000504396 ARID4BQ4LE39 1312 aaPredicted RBP15.3■□□□□ 0.04
DHFR-202ENST00000504396 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
DHFR-202ENST00000504396 PTPRMP28827 1452 aa15.28■□□□□ 0.04
DHFR-202ENST00000504396 ADAMTSL3P82987 1691 aa15.28■□□□□ 0.04
DHFR-202ENST00000504396 NEO1Q92859 1461 aa15.28■□□□□ 0.04
DHFR-202ENST00000504396 SSUH2Q9Y2M2 353 aa15.26■□□□□ 0.03
DHFR-202ENST00000504396 FRMPD1Q5SYB0 1578 aa15.25■□□□□ 0.03
DHFR-202ENST00000504396 BCORL1Q5H9F3 1711 aa15.25■□□□□ 0.03
DHFR-202ENST00000504396 MADDQ8WXG6 1647 aa15.25■□□□□ 0.03
DHFR-202ENST00000504396 NUP153P49790 1475 aaKnown RBP15.24■□□□□ 0.03
DHFR-202ENST00000504396 EEA1Q15075 1411 aa15.23■□□□□ 0.03
DHFR-202ENST00000504396 FHOD3Q2V2M9 1422 aa15.23■□□□□ 0.03
DHFR-202ENST00000504396 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
DHFR-202ENST00000504396 RIMS1Q86UR5 1692 aaKnown RBP15.22■□□□□ 0.03
DHFR-202ENST00000504396 PCF11O94913 1555 aaKnown RBP15.2■□□□□ 0.02
DHFR-202ENST00000504396 CFAP74Q9C0B2 1584 aa15.2■□□□□ 0.02
DHFR-202ENST00000504396 FBXO41Q8TF61 875 aa15.2■□□□□ 0.02
DHFR-202ENST00000504396 PLEKHD1A6NEE1 506 aa15.19■□□□□ 0.02
DHFR-202ENST00000504396 DENND4BO75064 1496 aaPredicted RBP15.19■□□□□ 0.02
DHFR-202ENST00000504396 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
DHFR-202ENST00000504396 FANCAO15360 1455 aa15.18■□□□□ 0.02
DHFR-202ENST00000504396 RICTORQ6R327 1708 aa15.18■□□□□ 0.02
DHFR-202ENST00000504396 AKNAQ7Z591 1439 aa15.16■□□□□ 0.02
DHFR-202ENST00000504396 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
DHFR-202ENST00000504396 LMTK3Q96Q04 1460 aa15.15■□□□□ 0.02
DHFR-202ENST00000504396 EFCAB5A4FU69 1503 aa15.15■□□□□ 0.02
DHFR-202ENST00000504396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
DHFR-202ENST00000504396 PITPNM1O00562 1244 aa15.14■□□□□ 0.01
DHFR-202ENST00000504396 POGZQ7Z3K3 1410 aa15.14■□□□□ 0.01
DHFR-202ENST00000504396 ZFYVE16Q7Z3T8 1539 aa15.13■□□□□ 0.01
DHFR-202ENST00000504396 SPDYE4A6NLX3 237 aa15.12■□□□□ 0.01
DHFR-202ENST00000504396 MLECQ14165 292 aa15.11■□□□□ 0.01
DHFR-202ENST00000504396 CDK13Q14004 1512 aaKnown RBP15.11■□□□□ 0.01
DHFR-202ENST00000504396 ZMYM4Q5VZL5 1548 aa15.1■□□□□ 0.01
DHFR-202ENST00000504396 HSPA2P54652 639 aa15.1■□□□□ 0.01
DHFR-202ENST00000504396 ATP1B4Q9UN42 357 aaPredicted RBP15.1■□□□□ 0.01
DHFR-202ENST00000504396 FER1L4A9Z1Z3 1794 aa15.1■□□□□ 0.01
DHFR-202ENST00000504396 YEATS2Q9ULM3 1422 aa15.09■□□□□ 0.01
DHFR-202ENST00000504396 SIGLEC1Q9BZZ2 1709 aa15.08■□□□□ 0.01
DHFR-202ENST00000504396 HECW1Q76N89 1606 aa15.08■□□□□ 0
DHFR-202ENST00000504396 POTEHQ6S545 545 aa15.08■□□□□ 0
DHFR-202ENST00000504396 MAGI2Q86UL8 1455 aa15.06■□□□□ 0
DHFR-202ENST00000504396 MYO5CQ9NQX4 1742 aa15.05■□□□□ 0
DHFR-202ENST00000504396 SCAPERQ9BY12 1400 aa15.05■□□□□ -0
DHFR-202ENST00000504396 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
DHFR-202ENST00000504396 CLEC11AQ9Y240 323 aa15.03■□□□□ -0
DHFR-202ENST00000504396 UBTFP17480 764 aaKnown RBP15.02■□□□□ -0
DHFR-202ENST00000504396 MYT1LQ9UL68 1186 aa15.02■□□□□ -0
DHFR-202ENST00000504396 PLCH2O75038 1416 aa15.02□□□□□ -0.01
DHFR-202ENST00000504396 C9orf84Q5VXU9 1444 aa15.01□□□□□ -0.01
DHFR-202ENST00000504396 FMN1Q68DA7 1419 aa15□□□□□ -0.01
DHFR-202ENST00000504396 KIF14Q15058 1648 aa15□□□□□ -0.01
DHFR-202ENST00000504396 ARHGAP5Q13017 1502 aa14.99□□□□□ -0.01
DHFR-202ENST00000504396 ATP10AO60312 1499 aa14.99□□□□□ -0.01
DHFR-202ENST00000504396 EFCAB2Q5VUJ9 269 aa14.99□□□□□ -0.01
DHFR-202ENST00000504396 CDK11AQ9UQ88 783 aaPredicted RBP14.99□□□□□ -0.01
DHFR-202ENST00000504396 PREX1Q8TCU6 1659 aa14.98□□□□□ -0.01
DHFR-202ENST00000504396 ARHGEF12Q9NZN5 1544 aa14.97□□□□□ -0.01
DHFR-202ENST00000504396 CERKQ8TCT0 537 aa14.96□□□□□ -0.01
DHFR-202ENST00000504396 ZNF518AQ6AHZ1 1483 aa14.96□□□□□ -0.01
DHFR-202ENST00000504396 CLIP1P30622 1438 aa14.95□□□□□ -0.02
DHFR-202ENST00000504396 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
DHFR-202ENST00000504396 CEBPAP49715 358 aaPredicted RBP14.94□□□□□ -0.02
DHFR-202ENST00000504396 TROQ12816 1431 aaPredicted RBP14.93□□□□□ -0.02
DHFR-202ENST00000504396 PIP4P2Q8N4L2 257 aa14.92□□□□□ -0.02
DHFR-202ENST00000504396 AFAP1Q8N556 730 aa14.92□□□□□ -0.02
DHFR-202ENST00000504396 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
DHFR-202ENST00000504396 KDM5CP41229 1560 aa14.91□□□□□ -0.02
DHFR-202ENST00000504396 LRRIQ1Q96JM4 1722 aa14.91□□□□□ -0.02
DHFR-202ENST00000504396 DIP2CQ9Y2E4 1556 aa14.9□□□□□ -0.02
DHFR-202ENST00000504396 ESF1Q9H501 851 aaKnown RBP14.9□□□□□ -0.02
DHFR-202ENST00000504396 ABCA6Q8N139 1617 aa14.89□□□□□ -0.03
DHFR-202ENST00000504396 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
DHFR-202ENST00000504396 CDC42BPBQ9Y5S2 1711 aa14.88□□□□□ -0.03
DHFR-202ENST00000504396 REREQ9P2R6 1566 aa14.87□□□□□ -0.03
DHFR-202ENST00000504396 PREX2Q70Z35 1606 aa14.87□□□□□ -0.03
DHFR-202ENST00000504396 STRCQ7RTU9 1775 aa14.87□□□□□ -0.03
DHFR-202ENST00000504396 C3P01024 1663 aa14.86□□□□□ -0.03
DHFR-202ENST00000504396 ITSN2Q9NZM3 1697 aa14.85□□□□□ -0.03
DHFR-202ENST00000504396 SETD1BQ9UPS6 1966 aaKnown RBP14.85□□□□□ -0.03
DHFR-202ENST00000504396 ABCC1P33527 1531 aa14.85□□□□□ -0.03
DHFR-202ENST00000504396 FKBP8Q14318 412 aa14.84□□□□□ -0.03
DHFR-202ENST00000504396 CCDC18Q5T9S5 1454 aa14.83□□□□□ -0.03
DHFR-202ENST00000504396 MLH3Q9UHC1 1453 aa14.83□□□□□ -0.04
DHFR-202ENST00000504396 TRAPPC8Q9Y2L5 1435 aa14.83□□□□□ -0.04
DHFR-202ENST00000504396 DISP3Q9P2K9 1392 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms