RNA–Protein interactions for RNA: ENST00000503668.1

HULC-201, hepatocellular carcinoma up-regulated long non-coding RNA, humanhuman

TSL 1 (best) BASIC

Gene HULC, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HULC-201ENST00000503668 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
HULC-201ENST00000503668 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
HULC-201ENST00000503668 BOLA1Q9Y3E2 137 aa14.32□□□□□ -0.12
HULC-201ENST00000503668 TNIKQ9UKE5 1360 aa14.3□□□□□ -0.12
HULC-201ENST00000503668 SMARCA2P51531 1590 aa14.26□□□□□ -0.13
HULC-201ENST00000503668 RIOK3O14730 519 aaKnown RBP14.25□□□□□ -0.13
HULC-201ENST00000503668 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
HULC-201ENST00000503668 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
HULC-201ENST00000503668 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
HULC-201ENST00000503668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.22□□□□□ -0.13
HULC-201ENST00000503668 ZFP91Q96JP5 570 aaPredicted RBP14.22□□□□□ -0.13
HULC-201ENST00000503668 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
HULC-201ENST00000503668 HOXB3P14651 431 aaPredicted RBP14.21□□□□□ -0.13
HULC-201ENST00000503668 G3V3G9 751 aa14.19□□□□□ -0.14
HULC-201ENST00000503668 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
HULC-201ENST00000503668 CCER1Q8TC90 406 aaPredicted RBP14.18□□□□□ -0.14
HULC-201ENST00000503668 MS4A4AQ96JQ5 239 aa14.18□□□□□ -0.14
HULC-201ENST00000503668 VGFO15240 615 aaPredicted RBP14.16□□□□□ -0.14
HULC-201ENST00000503668 EMP3P54852 163 aa14.16□□□□□ -0.14
HULC-201ENST00000503668 GOLGA3Q08378 1498 aa14.15□□□□□ -0.14
HULC-201ENST00000503668 SOX12O15370 315 aa14.15□□□□□ -0.14
HULC-201ENST00000503668 TMEM92Q6UXU6 159 aa14.14□□□□□ -0.15
HULC-201ENST00000503668 SPNS2Q8IVW8 549 aa14.14□□□□□ -0.15
HULC-201ENST00000503668 PHF8Q9UPP1 1060 aa14.14□□□□□ -0.15
HULC-201ENST00000503668 UNC13AQ9UPW8 1703 aa14.14□□□□□ -0.15
HULC-201ENST00000503668 CENPBP07199 599 aaPredicted RBP14.13□□□□□ -0.15
HULC-201ENST00000503668 FAM205CA6NFA0 338 aa14.12□□□□□ -0.15
HULC-201ENST00000503668 MICALL2Q8IY33 904 aa14.12□□□□□ -0.15
HULC-201ENST00000503668 HS3ST6Q96QI5 342 aa14.11□□□□□ -0.15
HULC-201ENST00000503668 KIF21BO75037 1637 aa14.1□□□□□ -0.15
HULC-201ENST00000503668 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
HULC-201ENST00000503668 CEP164Q9UPV0 1460 aa14.09□□□□□ -0.15
HULC-201ENST00000503668 BAZ1BQ9UIG0 1483 aaKnown RBP14.08□□□□□ -0.16
HULC-201ENST00000503668 MMRN1Q13201 1228 aa14.08□□□□□ -0.16
HULC-201ENST00000503668 KRTAP3-3Q9BYR6 98 aa14.07□□□□□ -0.16
HULC-201ENST00000503668 KRTAP3-2Q9BYR7 98 aa14.07□□□□□ -0.16
HULC-201ENST00000503668 ACIN1Q9UKV3 1341 aaKnown RBP14.07□□□□□ -0.16
HULC-201ENST00000503668 HOXB1P14653 301 aaPredicted RBP14.04□□□□□ -0.16
HULC-201ENST00000503668 MYT1Q01538 1121 aa14.04□□□□□ -0.16
HULC-201ENST00000503668 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
HULC-201ENST00000503668 SOGA1O94964 1423 aa14.04□□□□□ -0.16
HULC-201ENST00000503668 DIEXFQ68CQ4 756 aaKnown RBP14.03□□□□□ -0.16
HULC-201ENST00000503668 FBXO22Q8NEZ5 403 aa14.02□□□□□ -0.17
HULC-201ENST00000503668 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
HULC-201ENST00000503668 DOK7Q18PE1 504 aa14□□□□□ -0.17
HULC-201ENST00000503668 PKD2Q13563 968 aa13.99□□□□□ -0.17
HULC-201ENST00000503668 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
HULC-201ENST00000503668 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
HULC-201ENST00000503668 UBTFP17480 764 aaKnown RBP13.98□□□□□ -0.17
HULC-201ENST00000503668 STK24Q9Y6E0 443 aa13.98□□□□□ -0.17
HULC-201ENST00000503668 ZNF316A6NFI3 1004 aaPredicted RBP13.97□□□□□ -0.17
HULC-201ENST00000503668 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
HULC-201ENST00000503668 NLRP6P59044 892 aa13.96□□□□□ -0.17
HULC-201ENST00000503668 MFRPQ9BY79 579 aa13.96□□□□□ -0.17
HULC-201ENST00000503668 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
HULC-201ENST00000503668 RGL2O15211 777 aa13.93□□□□□ -0.18
HULC-201ENST00000503668 ERBB3P21860 1342 aa13.92□□□□□ -0.18
HULC-201ENST00000503668 CLIP1P30622 1438 aa13.92□□□□□ -0.18
HULC-201ENST00000503668 STK25O00506 426 aa13.92□□□□□ -0.18
HULC-201ENST00000503668 GPR153Q6NV75 609 aa13.92□□□□□ -0.18
HULC-201ENST00000503668 TAOK2Q9UL54 1235 aa13.91□□□□□ -0.18
HULC-201ENST00000503668 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
HULC-201ENST00000503668 ERICH3Q5RHP9 1530 aa13.89□□□□□ -0.19
HULC-201ENST00000503668 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
HULC-201ENST00000503668 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
HULC-201ENST00000503668 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
HULC-201ENST00000503668 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
HULC-201ENST00000503668 NEUROD1Q13562 356 aa13.86□□□□□ -0.19
HULC-201ENST00000503668 VARS2Q5ST30 1063 aaKnown RBP13.86□□□□□ -0.19
HULC-201ENST00000503668 ZSWIM6Q9HCJ5 1215 aa13.86□□□□□ -0.19
HULC-201ENST00000503668 BIVM-ERCC5R4GMW8 1640 aa13.84□□□□□ -0.19
HULC-201ENST00000503668 ARSIQ5FYB1 569 aa13.83□□□□□ -0.2
HULC-201ENST00000503668 KHSRPQ92945 711 aaKnown RBP eCLIP13.82□□□□□ -0.2
HULC-201ENST00000503668 KIF3CO14782 793 aa13.81□□□□□ -0.2
HULC-201ENST00000503668 C2orf72A6NCS6 295 aa13.78□□□□□ -0.2
HULC-201ENST00000503668 GTF3C3Q9Y5Q9 886 aa13.78□□□□□ -0.2
HULC-201ENST00000503668 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
HULC-201ENST00000503668 ZNF687Q8N1G0 1237 aa13.77□□□□□ -0.21
HULC-201ENST00000503668 PRXQ9BXM0 1461 aa13.76□□□□□ -0.21
HULC-201ENST00000503668 PPP1R37O75864 691 aa13.76□□□□□ -0.21
HULC-201ENST00000503668 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
HULC-201ENST00000503668 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
HULC-201ENST00000503668 CUX2O14529 1486 aa13.71□□□□□ -0.21
HULC-201ENST00000503668 MAP3K1Q13233 1512 aa13.69□□□□□ -0.22
HULC-201ENST00000503668 KIF27Q86VH2 1401 aa13.68□□□□□ -0.22
HULC-201ENST00000503668 RRBP1Q9P2E9 1410 aaKnown RBP13.68□□□□□ -0.22
HULC-201ENST00000503668 NUDT7P0C024 238 aa13.63□□□□□ -0.23
HULC-201ENST00000503668 ARAP1Q96P48 1450 aa13.62□□□□□ -0.23
HULC-201ENST00000503668 DHX57Q6P158 1386 aaKnown RBP13.61□□□□□ -0.23
HULC-201ENST00000503668 SLC34A2O95436 690 aa13.61□□□□□ -0.23
HULC-201ENST00000503668 TMC2Q8TDI7 906 aa13.61□□□□□ -0.23
HULC-201ENST00000503668 PCDHGA4Q9Y5G9 962 aa13.61□□□□□ -0.23
HULC-201ENST00000503668 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
HULC-201ENST00000503668 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
HULC-201ENST00000503668 CFTRP13569 1480 aa13.61□□□□□ -0.23
HULC-201ENST00000503668 POTEEQ6S8J3 1075 aa13.58□□□□□ -0.24
HULC-201ENST00000503668 RNF166Q96A37 237 aaPredicted RBP13.58□□□□□ -0.24
HULC-201ENST00000503668 LHX6Q9UPM6 363 aa13.58□□□□□ -0.24
HULC-201ENST00000503668 ANKRD13DQ6ZTN6 518 aa13.57□□□□□ -0.24
HULC-201ENST00000503668 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms