RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 NAIPQ13075 1403 aa32.42■■■□□ 2.78
PTPN13-205ENST00000502971 DNMT1P26358 1616 aaKnown RBP32.41■■■□□ 2.78
PTPN13-205ENST00000502971 DAPK1P53355 1430 aa32.4■■■□□ 2.78
PTPN13-205ENST00000502971 CAMSAP2Q08AD1 1489 aa32.39■■■□□ 2.78
PTPN13-205ENST00000502971 CDC42BPAQ5VT25 1732 aa32.39■■■□□ 2.77
PTPN13-205ENST00000502971 ZNF644Q9H582 1327 aaPredicted RBP32.37■■■□□ 2.77
PTPN13-205ENST00000502971 ABCC5O15440 1437 aa32.36■■■□□ 2.77
PTPN13-205ENST00000502971 GCC2Q8IWJ2 1684 aa32.35■■■□□ 2.77
PTPN13-205ENST00000502971 ROCK1Q13464 1354 aa32.34■■■□□ 2.77
PTPN13-205ENST00000502971 CHIC2Q9UKJ5 165 aa32.31■■■□□ 2.76
PTPN13-205ENST00000502971 MAPKBP1O60336 1514 aa32.31■■■□□ 2.76
PTPN13-205ENST00000502971 WDR7Q9Y4E6 1490 aa32.28■■■□□ 2.76
PTPN13-205ENST00000502971 RRP7BPQ9NSQ0 103 aa32.27■■■□□ 2.76
PTPN13-205ENST00000502971 ASXL2Q76L83 1435 aa32.27■■■□□ 2.76
PTPN13-205ENST00000502971 ZNF777Q9ULD5 760 aaPredicted RBP32.26■■■□□ 2.76
PTPN13-205ENST00000502971 PREX2Q70Z35 1606 aa32.26■■■□□ 2.75
PTPN13-205ENST00000502971 ACIN1Q9UKV3 1341 aaKnown RBP32.23■■■□□ 2.75
PTPN13-205ENST00000502971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.23■■■□□ 2.75
PTPN13-205ENST00000502971 CROCC2H7BZ55 1655 aa32.2■■■□□ 2.75
PTPN13-205ENST00000502971 TTC37Q6PGP7 1564 aa32.18■■■□□ 2.74
PTPN13-205ENST00000502971 MYO5CQ9NQX4 1742 aa32.18■■■□□ 2.74
PTPN13-205ENST00000502971 CDC42BPBQ9Y5S2 1711 aa32.18■■■□□ 2.74
PTPN13-205ENST00000502971 ADGBQ8N7X0 1667 aa32.17■■■□□ 2.74
PTPN13-205ENST00000502971 ADGRL2O95490 1459 aa32.16■■■□□ 2.74
PTPN13-205ENST00000502971 KCNH8Q96L42 1107 aa32.16■■■□□ 2.74
PTPN13-205ENST00000502971 SHANK2Q9UPX8 1470 aa32.14■■■□□ 2.74
PTPN13-205ENST00000502971 ARHGEF5Q12774 1597 aa32.14■■■□□ 2.74
PTPN13-205ENST00000502971 NCOA1Q15788 1441 aa32.11■■■□□ 2.73
PTPN13-205ENST00000502971 SAMD9LQ8IVG5 1584 aa32.11■■■□□ 2.73
PTPN13-205ENST00000502971 KDM6BO15054 1643 aa32.11■■■□□ 2.73
PTPN13-205ENST00000502971 ARHGAP5Q13017 1502 aa32.09■■■□□ 2.73
PTPN13-205ENST00000502971 RSPH4AQ5TD94 716 aa32.09■■■□□ 2.73
PTPN13-205ENST00000502971 ANKRD30AQ9BXX3 1397 aa32.08■■■□□ 2.73
PTPN13-205ENST00000502971 MBD5Q9P267 1494 aa32.07■■■□□ 2.72
PTPN13-205ENST00000502971 PLCH2O75038 1416 aa32.05■■■□□ 2.72
PTPN13-205ENST00000502971 PLEKHH2Q8IVE3 1493 aa32.04■■■□□ 2.72
PTPN13-205ENST00000502971 ABCA9Q8IUA7 1624 aa32.04■■■□□ 2.72
PTPN13-205ENST00000502971 C9orf84Q5VXU9 1444 aa32.03■■■□□ 2.72
PTPN13-205ENST00000502971 TSPY4P0CV99 314 aa32.03■■■□□ 2.72
PTPN13-205ENST00000502971 TSPY10P0CW01 314 aa32.03■■■□□ 2.72
PTPN13-205ENST00000502971 TIMELESSQ9UNS1 1208 aa32.03■■■□□ 2.72
PTPN13-205ENST00000502971 CCDC141Q6ZP82 1450 aa32.02■■■□□ 2.72
PTPN13-205ENST00000502971 HNRNPMP52272 730 aaKnown RBP eCLIP32.01■■■□□ 2.72
PTPN13-205ENST00000502971 TRIM52Q96A61 297 aa32.01■■■□□ 2.72
PTPN13-205ENST00000502971 KIAA1107Q9UPP5 1409 aa32.01■■■□□ 2.71
PTPN13-205ENST00000502971 ARAP3Q8WWN8 1544 aa32■■■□□ 2.71
PTPN13-205ENST00000502971 ZNF316A6NFI3 1004 aaPredicted RBP31.97■■■□□ 2.71
PTPN13-205ENST00000502971 SIN3AQ96ST3 1273 aa31.97■■■□□ 2.71
PTPN13-205ENST00000502971 EFCAB2Q5VUJ9 269 aa31.95■■■□□ 2.71
PTPN13-205ENST00000502971 GLI2P10070 1586 aa31.95■■■□□ 2.71
PTPN13-205ENST00000502971 SYCP2Q9BX26 1530 aa31.95■■■□□ 2.7
PTPN13-205ENST00000502971 MPHOSPH9Q99550 1183 aa31.92■■■□□ 2.7
PTPN13-205ENST00000502971 NEUROD1Q13562 356 aa31.92■■■□□ 2.7
PTPN13-205ENST00000502971 MAST1Q9Y2H9 1570 aa31.92■■■□□ 2.7
PTPN13-205ENST00000502971 DENND4BO75064 1496 aaPredicted RBP31.9■■■□□ 2.7
PTPN13-205ENST00000502971 ANKRD50Q9ULJ7 1429 aa31.9■■■□□ 2.7
PTPN13-205ENST00000502971 DIP2BQ9P265 1576 aa31.89■■■□□ 2.7
PTPN13-205ENST00000502971 CD109Q6YHK3 1445 aa31.88■■■□□ 2.69
PTPN13-205ENST00000502971 ABCC1P33527 1531 aa31.84■■■□□ 2.69
PTPN13-205ENST00000502971 KIF15Q9NS87 1388 aa31.84■■■□□ 2.69
PTPN13-205ENST00000502971 FAM69CQ0P6D2 419 aa31.84■■■□□ 2.69
PTPN13-205ENST00000502971 ARHGEF12Q9NZN5 1544 aa31.83■■■□□ 2.69
PTPN13-205ENST00000502971 MAP3K4Q9Y6R4 1608 aa31.82■■■□□ 2.68
PTPN13-205ENST00000502971 FANCAO15360 1455 aa31.79■■■□□ 2.68
PTPN13-205ENST00000502971 TONSLQ96HA7 1378 aa31.77■■■□□ 2.68
PTPN13-205ENST00000502971 PZPP20742 1482 aa31.77■■■□□ 2.68
PTPN13-205ENST00000502971 PLXNC1O60486 1568 aa31.77■■■□□ 2.68
PTPN13-205ENST00000502971 SLC4A1APQ9BWU0 796 aaKnown RBP31.77■■■□□ 2.68
PTPN13-205ENST00000502971 CFAP74Q9C0B2 1584 aa31.74■■■□□ 2.67
PTPN13-205ENST00000502971 KDM5DQ9BY66 1539 aa31.72■■■□□ 2.67
PTPN13-205ENST00000502971 PPP1R15AO75807 674 aaPredicted RBP31.72■■■□□ 2.67
PTPN13-205ENST00000502971 KIF13AQ9H1H9 1805 aa31.71■■■□□ 2.67
PTPN13-205ENST00000502971 ANKRD30BQ9BXX2 1392 aa31.71■■■□□ 2.67
PTPN13-205ENST00000502971 NEO1Q92859 1461 aa31.7■■■□□ 2.67
PTPN13-205ENST00000502971 TRAPPC8Q9Y2L5 1435 aa31.7■■■□□ 2.66
PTPN13-205ENST00000502971 DIEXFQ68CQ4 756 aaKnown RBP31.69■■■□□ 2.66
PTPN13-205ENST00000502971 RTEL1-TNFRSF6BF6WH68 1400 aa31.66■■■□□ 2.66
PTPN13-205ENST00000502971 DUOX2Q9NRD8 1548 aa31.65■■■□□ 2.66
PTPN13-205ENST00000502971 TEX14Q8IWB6 1497 aa31.65■■■□□ 2.66
PTPN13-205ENST00000502971 NUP155O75694 1391 aa31.65■■■□□ 2.66
PTPN13-205ENST00000502971 FOXD1Q16676 465 aa31.64■■■□□ 2.66
PTPN13-205ENST00000502971 ADGRL1O94910 1474 aa31.63■■■□□ 2.65
PTPN13-205ENST00000502971 SPAG9O60271 1321 aaKnown RBP31.6■■■□□ 2.65
PTPN13-205ENST00000502971 ERBINQ96RT1 1412 aa31.6■■■□□ 2.65
PTPN13-205ENST00000502971 RPRD2Q5VT52 1461 aaKnown RBP31.59■■■□□ 2.65
PTPN13-205ENST00000502971 SCAPERQ9BY12 1400 aa31.59■■■□□ 2.65
PTPN13-205ENST00000502971 UNC13BO14795 1591 aa31.57■■■□□ 2.65
PTPN13-205ENST00000502971 PKD2Q13563 968 aa31.57■■■□□ 2.64
PTPN13-205ENST00000502971 TRHP20396 242 aaPredicted RBP31.56■■■□□ 2.64
PTPN13-205ENST00000502971 ZFYVE16Q7Z3T8 1539 aa31.56■■■□□ 2.64
PTPN13-205ENST00000502971 PPRC1Q5VV67 1664 aaKnown RBP31.56■■■□□ 2.64
PTPN13-205ENST00000502971 AFAP1Q8N556 730 aa31.55■■■□□ 2.64
PTPN13-205ENST00000502971 TSPOAP1O95153 1857 aa31.52■■■□□ 2.64
PTPN13-205ENST00000502971 INO80Q9ULG1 1556 aaPredicted RBP31.52■■■□□ 2.64
PTPN13-205ENST00000502971 FAM135AQ9P2D6 1515 aa31.5■■■□□ 2.63
PTPN13-205ENST00000502971 ZNF518AQ6AHZ1 1483 aa31.5■■■□□ 2.63
PTPN13-205ENST00000502971 ATP7AQ04656 1500 aa31.49■■■□□ 2.63
PTPN13-205ENST00000502971 MAGI2Q86UL8 1455 aa31.47■■■□□ 2.63
PTPN13-205ENST00000502971 POGZQ7Z3K3 1410 aa31.47■■■□□ 2.63
PTPN13-205ENST00000502971 IQGAP3Q86VI3 1631 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms