RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 EHMT2Q96KQ7 1210 aa24.47■■□□□ 1.51
SEC61A1-207ENST00000498837 PLCH2O75038 1416 aa24.46■■□□□ 1.51
SEC61A1-207ENST00000498837 SCAPERQ9BY12 1400 aa24.46■■□□□ 1.51
SEC61A1-207ENST00000498837 MLECQ14165 292 aa24.45■■□□□ 1.5
SEC61A1-207ENST00000498837 ATP1B4Q9UN42 357 aaPredicted RBP24.43■■□□□ 1.5
SEC61A1-207ENST00000498837 KIF14Q15058 1648 aa24.4■■□□□ 1.5
SEC61A1-207ENST00000498837 UBTFP17480 764 aaKnown RBP24.4■■□□□ 1.5
SEC61A1-207ENST00000498837 LRRIQ1Q96JM4 1722 aa24.4■■□□□ 1.5
SEC61A1-207ENST00000498837 FMN1Q68DA7 1419 aa24.38■■□□□ 1.49
SEC61A1-207ENST00000498837 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
SEC61A1-207ENST00000498837 ATP10AO60312 1499 aa24.37■■□□□ 1.49
SEC61A1-207ENST00000498837 EFCAB2Q5VUJ9 269 aa24.36■■□□□ 1.49
SEC61A1-207ENST00000498837 ARHGEF12Q9NZN5 1544 aa24.35■■□□□ 1.49
SEC61A1-207ENST00000498837 C9orf84Q5VXU9 1444 aa24.33■■□□□ 1.49
SEC61A1-207ENST00000498837 PREX1Q8TCU6 1659 aa24.32■■□□□ 1.48
SEC61A1-207ENST00000498837 CDK11AQ9UQ88 783 aaPredicted RBP24.32■■□□□ 1.48
SEC61A1-207ENST00000498837 CDC42BPBQ9Y5S2 1711 aa24.31■■□□□ 1.48
SEC61A1-207ENST00000498837 ARHGAP5Q13017 1502 aa24.29■■□□□ 1.48
SEC61A1-207ENST00000498837 SETD1BQ9UPS6 1966 aaKnown RBP24.29■■□□□ 1.48
SEC61A1-207ENST00000498837 TROQ12816 1431 aaPredicted RBP24.28■■□□□ 1.48
SEC61A1-207ENST00000498837 CEBPAP49715 358 aaPredicted RBP24.28■■□□□ 1.48
SEC61A1-207ENST00000498837 ZNF518AQ6AHZ1 1483 aa24.27■■□□□ 1.48
SEC61A1-207ENST00000498837 AFAP1Q8N556 730 aa24.27■■□□□ 1.48
SEC61A1-207ENST00000498837 KDM5CP41229 1560 aa24.27■■□□□ 1.48
SEC61A1-207ENST00000498837 CERKQ8TCT0 537 aa24.25■■□□□ 1.47
SEC61A1-207ENST00000498837 STRCQ7RTU9 1775 aa24.24■■□□□ 1.47
SEC61A1-207ENST00000498837 CLIP1P30622 1438 aa24.23■■□□□ 1.47
SEC61A1-207ENST00000498837 DIP2CQ9Y2E4 1556 aa24.23■■□□□ 1.47
SEC61A1-207ENST00000498837 MYT1LQ9UL68 1186 aa24.22■■□□□ 1.47
SEC61A1-207ENST00000498837 ABCA6Q8N139 1617 aa24.21■■□□□ 1.47
SEC61A1-207ENST00000498837 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
SEC61A1-207ENST00000498837 PREX2Q70Z35 1606 aa24.19■■□□□ 1.46
SEC61A1-207ENST00000498837 C3P01024 1663 aa24.18■■□□□ 1.46
SEC61A1-207ENST00000498837 ITSN2Q9NZM3 1697 aa24.18■■□□□ 1.46
SEC61A1-207ENST00000498837 REREQ9P2R6 1566 aa24.16■■□□□ 1.46
SEC61A1-207ENST00000498837 CDC42BPAQ5VT25 1732 aa24.15■■□□□ 1.46
SEC61A1-207ENST00000498837 MLH3Q9UHC1 1453 aa24.14■■□□□ 1.46
SEC61A1-207ENST00000498837 TRAPPC8Q9Y2L5 1435 aa24.14■■□□□ 1.45
SEC61A1-207ENST00000498837 ABCC1P33527 1531 aa24.14■■□□□ 1.45
SEC61A1-207ENST00000498837 KIDINS220Q9ULH0 1771 aa24.13■■□□□ 1.45
SEC61A1-207ENST00000498837 UHRF1BP1Q6BDS2 1440 aa24.12■■□□□ 1.45
SEC61A1-207ENST00000498837 CASKIN1Q8WXD9 1431 aa24.1■■□□□ 1.45
SEC61A1-207ENST00000498837 CCDC18Q5T9S5 1454 aa24.1■■□□□ 1.45
SEC61A1-207ENST00000498837 AGLP35573 1532 aa24.09■■□□□ 1.45
SEC61A1-207ENST00000498837 DMRT2Q9Y5R5 561 aa24.07■■□□□ 1.44
SEC61A1-207ENST00000498837 ESF1Q9H501 851 aaKnown RBP24.03■■□□□ 1.44
SEC61A1-207ENST00000498837 SAMD9LQ8IVG5 1584 aa24.01■■□□□ 1.43
SEC61A1-207ENST00000498837 SUPT6HQ7KZ85 1726 aaKnown RBP24.01■■□□□ 1.43
SEC61A1-207ENST00000498837 ZNF777Q9ULD5 760 aaPredicted RBP23.99■■□□□ 1.43
SEC61A1-207ENST00000498837 FYCO1Q9BQS8 1478 aa23.99■■□□□ 1.43
SEC61A1-207ENST00000498837 PTPRTO14522 1441 aa23.98■■□□□ 1.43
SEC61A1-207ENST00000498837 MROH2AA6NES4 1674 aa23.97■■□□□ 1.43
SEC61A1-207ENST00000498837 SYCP2Q9BX26 1530 aa23.97■■□□□ 1.43
SEC61A1-207ENST00000498837 CNTLNQ9NXG0 1405 aa23.95■■□□□ 1.42
SEC61A1-207ENST00000498837 GPATCH8Q9UKJ3 1502 aaKnown RBP23.94■■□□□ 1.42
SEC61A1-207ENST00000498837 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
SEC61A1-207ENST00000498837 CLTCQ00610 1675 aaKnown RBP23.92■■□□□ 1.42
SEC61A1-207ENST00000498837 LTBP4Q8N2S1 1624 aa23.92■■□□□ 1.42
SEC61A1-207ENST00000498837 SPAG9O60271 1321 aaKnown RBP23.91■■□□□ 1.42
SEC61A1-207ENST00000498837 NCOA1Q15788 1441 aa23.91■■□□□ 1.42
SEC61A1-207ENST00000498837 ATP7AQ04656 1500 aa23.89■■□□□ 1.42
SEC61A1-207ENST00000498837 CAMSAP1Q5T5Y3 1602 aa23.89■■□□□ 1.42
SEC61A1-207ENST00000498837 ZMYM3Q14202 1370 aa23.88■■□□□ 1.41
SEC61A1-207ENST00000498837 INO80Q9ULG1 1556 aaPredicted RBP23.87■■□□□ 1.41
SEC61A1-207ENST00000498837 NPATQ14207 1427 aa23.87■■□□□ 1.41
SEC61A1-207ENST00000498837 DISP3Q9P2K9 1392 aa23.87■■□□□ 1.41
SEC61A1-207ENST00000498837 PLXNC1O60486 1568 aa23.85■■□□□ 1.41
SEC61A1-207ENST00000498837 ILDR2Q71H61 639 aa23.84■■□□□ 1.41
SEC61A1-207ENST00000498837 CFDP1Q9UEE9 299 aaPredicted RBP23.84■■□□□ 1.41
SEC61A1-207ENST00000498837 KIAA1107Q9UPP5 1409 aa23.84■■□□□ 1.41
SEC61A1-207ENST00000498837 A2MP01023 1474 aa23.82■■□□□ 1.4
SEC61A1-207ENST00000498837 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
SEC61A1-207ENST00000498837 CCNB3Q8WWL7 1395 aa23.82■■□□□ 1.4
SEC61A1-207ENST00000498837 MYO3AQ8NEV4 1616 aa23.82■■□□□ 1.4
SEC61A1-207ENST00000498837 ZNF142P52746 1687 aaPredicted RBP23.82■■□□□ 1.4
SEC61A1-207ENST00000498837 ADGBQ8N7X0 1667 aa23.81■■□□□ 1.4
SEC61A1-207ENST00000498837 NCKAP5LQ9HCH0 1330 aa23.81■■□□□ 1.4
SEC61A1-207ENST00000498837 GGT6Q6P531 493 aa23.79■■□□□ 1.4
SEC61A1-207ENST00000498837 IQSEC2Q5JU85 1478 aa23.79■■□□□ 1.4
SEC61A1-207ENST00000498837 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
SEC61A1-207ENST00000498837 PTPRKQ15262 1439 aa23.76■■□□□ 1.39
SEC61A1-207ENST00000498837 TIAM1Q13009 1591 aa23.76■■□□□ 1.39
SEC61A1-207ENST00000498837 CEP170BQ9Y4F5 1589 aaPredicted RBP23.76■■□□□ 1.39
SEC61A1-207ENST00000498837 ZNF644Q9H582 1327 aaPredicted RBP23.76■■□□□ 1.39
SEC61A1-207ENST00000498837 SPATA31D1Q6ZQQ2 1576 aa23.75■■□□□ 1.39
SEC61A1-207ENST00000498837 ZNF335Q9H4Z2 1342 aaPredicted RBP23.74■■□□□ 1.39
SEC61A1-207ENST00000498837 PLA2R1Q13018 1463 aa23.71■■□□□ 1.39
SEC61A1-207ENST00000498837 MBD5Q9P267 1494 aa23.71■■□□□ 1.39
SEC61A1-207ENST00000498837 TCOF1Q13428 1488 aaKnown RBP23.69■■□□□ 1.38
SEC61A1-207ENST00000498837 SOCS7O14512 581 aa23.69■■□□□ 1.38
SEC61A1-207ENST00000498837 PKD2Q13563 968 aa23.69■■□□□ 1.38
SEC61A1-207ENST00000498837 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
SEC61A1-207ENST00000498837 PPP6R1Q9UPN7 881 aa23.67■■□□□ 1.38
SEC61A1-207ENST00000498837 DNMT1P26358 1616 aaKnown RBP23.66■■□□□ 1.38
SEC61A1-207ENST00000498837 RTEL1-TNFRSF6BF6WH68 1400 aa23.65■■□□□ 1.38
SEC61A1-207ENST00000498837 UBAP1LF5GYI3 381 aa23.64■■□□□ 1.37
SEC61A1-207ENST00000498837 POLR1AO95602 1720 aaPredicted RBP23.64■■□□□ 1.37
SEC61A1-207ENST00000498837 DHX29Q7Z478 1369 aaKnown RBP23.64■■□□□ 1.37
SEC61A1-207ENST00000498837 A2ML1A8K2U0 1454 aa23.63■■□□□ 1.37
SEC61A1-207ENST00000498837 CEP162Q5TB80 1403 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms