RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 ASXL2Q76L83 1435 aa10.58□□□□□ -0.72
GPATCH4-209ENST00000498641 SETD5Q9C0A6 1442 aa10.57□□□□□ -0.72
GPATCH4-209ENST00000498641 ITSN2Q9NZM3 1697 aa10.57□□□□□ -0.72
GPATCH4-209ENST00000498641 ZEB1P37275 1124 aaPredicted RBP10.56□□□□□ -0.72
GPATCH4-209ENST00000498641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.56□□□□□ -0.72
GPATCH4-209ENST00000498641 CAMSAP2Q08AD1 1489 aa10.55□□□□□ -0.72
GPATCH4-209ENST00000498641 EFCAB2Q5VUJ9 269 aa10.55□□□□□ -0.72
GPATCH4-209ENST00000498641 PTPRKQ15262 1439 aa10.55□□□□□ -0.72
GPATCH4-209ENST00000498641 ARHGAP5Q13017 1502 aa10.54□□□□□ -0.72
GPATCH4-209ENST00000498641 DAPK1P53355 1430 aa10.54□□□□□ -0.72
GPATCH4-209ENST00000498641 RRP7BPQ9NSQ0 103 aa10.54□□□□□ -0.72
GPATCH4-209ENST00000498641 RAB3GAP2Q9H2M9 1393 aa10.53□□□□□ -0.72
GPATCH4-209ENST00000498641 TTC37Q6PGP7 1564 aa10.53□□□□□ -0.72
GPATCH4-209ENST00000498641 ABCC5O15440 1437 aa10.53□□□□□ -0.72
GPATCH4-209ENST00000498641 PLCH2O75038 1416 aa10.53□□□□□ -0.72
GPATCH4-209ENST00000498641 HNRNPMP52272 730 aaKnown RBP eCLIP10.53□□□□□ -0.72
GPATCH4-209ENST00000498641 TSPY4P0CV99 314 aa10.52□□□□□ -0.73
GPATCH4-209ENST00000498641 TSPY10P0CW01 314 aa10.52□□□□□ -0.73
GPATCH4-209ENST00000498641 RSPH4AQ5TD94 716 aa10.52□□□□□ -0.73
GPATCH4-209ENST00000498641 CDC42BPAQ5VT25 1732 aa10.52□□□□□ -0.73
GPATCH4-209ENST00000498641 PREX2Q70Z35 1606 aa10.51□□□□□ -0.73
GPATCH4-209ENST00000498641 HFM1A2PYH4 1435 aa10.5□□□□□ -0.73
GPATCH4-209ENST00000498641 DNMT1P26358 1616 aaKnown RBP10.5□□□□□ -0.73
GPATCH4-209ENST00000498641 PLEKHH2Q8IVE3 1493 aa10.49□□□□□ -0.73
GPATCH4-209ENST00000498641 ROCK1Q13464 1354 aa10.49□□□□□ -0.73
GPATCH4-209ENST00000498641 NAIPQ13075 1403 aa10.49□□□□□ -0.73
GPATCH4-209ENST00000498641 AKNAQ7Z591 1439 aa10.49□□□□□ -0.73
GPATCH4-209ENST00000498641 MYO5CQ9NQX4 1742 aa10.48□□□□□ -0.73
GPATCH4-209ENST00000498641 ANKRD30AQ9BXX3 1397 aa10.48□□□□□ -0.73
GPATCH4-209ENST00000498641 SAMD9LQ8IVG5 1584 aa10.48□□□□□ -0.73
GPATCH4-209ENST00000498641 CDC42BPBQ9Y5S2 1711 aa10.47□□□□□ -0.73
GPATCH4-209ENST00000498641 DHX57Q6P158 1386 aaKnown RBP10.47□□□□□ -0.73
GPATCH4-209ENST00000498641 CD109Q6YHK3 1445 aa10.47□□□□□ -0.73
GPATCH4-209ENST00000498641 KIAA1107Q9UPP5 1409 aa10.47□□□□□ -0.73
GPATCH4-209ENST00000498641 MAPKBP1O60336 1514 aa10.47□□□□□ -0.73
GPATCH4-209ENST00000498641 ABCA9Q8IUA7 1624 aa10.47□□□□□ -0.73
GPATCH4-209ENST00000498641 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
GPATCH4-209ENST00000498641 C9orf84Q5VXU9 1444 aa10.46□□□□□ -0.74
GPATCH4-209ENST00000498641 FANCAO15360 1455 aa10.46□□□□□ -0.74
GPATCH4-209ENST00000498641 CCDC141Q6ZP82 1450 aa10.46□□□□□ -0.74
GPATCH4-209ENST00000498641 MBD5Q9P267 1494 aa10.46□□□□□ -0.74
GPATCH4-209ENST00000498641 ARHGEF5Q12774 1597 aa10.45□□□□□ -0.74
GPATCH4-209ENST00000498641 ARAP3Q8WWN8 1544 aa10.45□□□□□ -0.74
GPATCH4-209ENST00000498641 SYCP2Q9BX26 1530 aa10.45□□□□□ -0.74
GPATCH4-209ENST00000498641 FAM69CQ0P6D2 419 aa10.45□□□□□ -0.74
GPATCH4-209ENST00000498641 SHANK2Q9UPX8 1470 aa10.44□□□□□ -0.74
GPATCH4-209ENST00000498641 NCOA1Q15788 1441 aa10.44□□□□□ -0.74
GPATCH4-209ENST00000498641 ACIN1Q9UKV3 1341 aaKnown RBP10.44□□□□□ -0.74
GPATCH4-209ENST00000498641 CLSPNQ9HAW4 1339 aa10.43□□□□□ -0.74
GPATCH4-209ENST00000498641 MYT1LQ9UL68 1186 aa10.43□□□□□ -0.74
GPATCH4-209ENST00000498641 ADGRL2O95490 1459 aa10.42□□□□□ -0.74
GPATCH4-209ENST00000498641 SCAPERQ9BY12 1400 aa10.42□□□□□ -0.74
GPATCH4-209ENST00000498641 SPAG9O60271 1321 aaKnown RBP10.42□□□□□ -0.74
GPATCH4-209ENST00000498641 AFAP1Q8N556 730 aa10.42□□□□□ -0.74
GPATCH4-209ENST00000498641 ARHGEF12Q9NZN5 1544 aa10.42□□□□□ -0.74
GPATCH4-209ENST00000498641 ADGRL1O94910 1474 aa10.42□□□□□ -0.74
GPATCH4-209ENST00000498641 TRAPPC8Q9Y2L5 1435 aa10.41□□□□□ -0.74
GPATCH4-209ENST00000498641 ABCC1P33527 1531 aa10.41□□□□□ -0.74
GPATCH4-209ENST00000498641 CROCC2H7BZ55 1655 aa10.41□□□□□ -0.74
GPATCH4-209ENST00000498641 KIF15Q9NS87 1388 aa10.4□□□□□ -0.74
GPATCH4-209ENST00000498641 GCC2Q8IWJ2 1684 aa10.4□□□□□ -0.74
GPATCH4-209ENST00000498641 ANKRD50Q9ULJ7 1429 aa10.4□□□□□ -0.75
GPATCH4-209ENST00000498641 ADGBQ8N7X0 1667 aa10.39□□□□□ -0.75
GPATCH4-209ENST00000498641 GLI2P10070 1586 aa10.39□□□□□ -0.75
GPATCH4-209ENST00000498641 MPHOSPH9Q99550 1183 aa10.38□□□□□ -0.75
GPATCH4-209ENST00000498641 NEO1Q92859 1461 aa10.37□□□□□ -0.75
GPATCH4-209ENST00000498641 KDM6BO15054 1643 aa10.37□□□□□ -0.75
GPATCH4-209ENST00000498641 CFAP74Q9C0B2 1584 aa10.37□□□□□ -0.75
GPATCH4-209ENST00000498641 MAST1Q9Y2H9 1570 aa10.37□□□□□ -0.75
GPATCH4-209ENST00000498641 RTEL1-TNFRSF6BF6WH68 1400 aa10.36□□□□□ -0.75
GPATCH4-209ENST00000498641 SLC4A1APQ9BWU0 796 aaKnown RBP10.36□□□□□ -0.75
GPATCH4-209ENST00000498641 DIP2BQ9P265 1576 aa10.35□□□□□ -0.75
GPATCH4-209ENST00000498641 NEUROD1Q13562 356 aa10.35□□□□□ -0.75
GPATCH4-209ENST00000498641 ZNF518AQ6AHZ1 1483 aa10.35□□□□□ -0.75
GPATCH4-209ENST00000498641 MAP3K4Q9Y6R4 1608 aa10.34□□□□□ -0.75
GPATCH4-209ENST00000498641 RAPGEF3O95398 923 aa10.34□□□□□ -0.75
GPATCH4-209ENST00000498641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.34□□□□□ -0.757e-7■■□□□ 12.5
GPATCH4-209ENST00000498641 NUP155O75694 1391 aa10.34□□□□□ -0.75
GPATCH4-209ENST00000498641 DENND4BO75064 1496 aaPredicted RBP10.34□□□□□ -0.75
GPATCH4-209ENST00000498641 SIN3AQ96ST3 1273 aa10.33□□□□□ -0.76
GPATCH4-209ENST00000498641 TEX14Q8IWB6 1497 aa10.33□□□□□ -0.76
GPATCH4-209ENST00000498641 DUOX2Q9NRD8 1548 aa10.33□□□□□ -0.76
GPATCH4-209ENST00000498641 POGZQ7Z3K3 1410 aa10.33□□□□□ -0.76
GPATCH4-209ENST00000498641 PLXNC1O60486 1568 aa10.32□□□□□ -0.76
GPATCH4-209ENST00000498641 ATP7AQ04656 1500 aa10.32□□□□□ -0.76
GPATCH4-209ENST00000498641 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
GPATCH4-209ENST00000498641 FOXD1Q16676 465 aa10.31□□□□□ -0.76
GPATCH4-209ENST00000498641 ZFYVE16Q7Z3T8 1539 aa10.31□□□□□ -0.76
GPATCH4-209ENST00000498641 ERBINQ96RT1 1412 aa10.31□□□□□ -0.76
GPATCH4-209ENST00000498641 PKD2Q13563 968 aa10.3□□□□□ -0.76
GPATCH4-209ENST00000498641 DHX29Q7Z478 1369 aaKnown RBP10.29□□□□□ -0.76
GPATCH4-209ENST00000498641 PZPP20742 1482 aa10.29□□□□□ -0.76
GPATCH4-209ENST00000498641 MLH3Q9UHC1 1453 aa10.29□□□□□ -0.76
GPATCH4-209ENST00000498641 INO80Q9ULG1 1556 aaPredicted RBP10.28□□□□□ -0.76
GPATCH4-209ENST00000498641 KIF3BO15066 747 aa10.28□□□□□ -0.76
GPATCH4-209ENST00000498641 TIMELESSQ9UNS1 1208 aa10.28□□□□□ -0.76
GPATCH4-209ENST00000498641 KANK1Q14678 1352 aa10.26□□□□□ -0.77
GPATCH4-209ENST00000498641 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
GPATCH4-209ENST00000498641 KDM5CP41229 1560 aa10.26□□□□□ -0.77
GPATCH4-209ENST00000498641 ANKRD30BQ9BXX2 1392 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms