RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 SNAPC4Q5SXM2 1469 aa12.03□□□□□ -0.48
CDC42-205ENST00000498236 CTTNBP2Q8WZ74 1663 aa12.03□□□□□ -0.48
CDC42-205ENST00000498236 VPS8Q8N3P4 1428 aa12.03□□□□□ -0.48
CDC42-205ENST00000498236 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.49
CDC42-205ENST00000498236 RGL2O15211 777 aa12.01□□□□□ -0.49
CDC42-205ENST00000498236 SYNJ2O15056 1496 aa12.01□□□□□ -0.49
CDC42-205ENST00000498236 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
CDC42-205ENST00000498236 OTUD5Q96G74 571 aa12□□□□□ -0.49
CDC42-205ENST00000498236 EFCAB5A4FU69 1503 aa12□□□□□ -0.49
CDC42-205ENST00000498236 GRIN2AQ12879 1464 aa11.99□□□□□ -0.49
CDC42-205ENST00000498236 GSE1Q14687 1217 aa11.98□□□□□ -0.49
CDC42-205ENST00000498236 NUBP1P53384 320 aa11.97□□□□□ -0.49
CDC42-205ENST00000498236 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
CDC42-205ENST00000498236 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.49
CDC42-205ENST00000498236 SAMD9Q5K651 1589 aa11.95□□□□□ -0.5
CDC42-205ENST00000498236 KIAA0586Q9BVV6 1533 aa11.95□□□□□ -0.5
CDC42-205ENST00000498236 IQGAP2Q13576 1575 aa11.94□□□□□ -0.5
CDC42-205ENST00000498236 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
CDC42-205ENST00000498236 BBXQ8WY36 941 aaPredicted RBP11.94□□□□□ -0.5
CDC42-205ENST00000498236 MS4A3Q96HJ5 214 aa11.94□□□□□ -0.5
CDC42-205ENST00000498236 C7P10643 843 aa11.93□□□□□ -0.5
CDC42-205ENST00000498236 RANGAP1P46060 587 aaPredicted RBP11.93□□□□□ -0.5
CDC42-205ENST00000498236 CHMP7Q8WUX9 453 aaPredicted RBP11.93□□□□□ -0.5
CDC42-205ENST00000498236 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
CDC42-205ENST00000498236 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.93□□□□□ -0.5
CDC42-205ENST00000498236 NUP160Q12769 1436 aa11.93□□□□□ -0.5
CDC42-205ENST00000498236 UGGT2Q9NYU1 1516 aa11.92□□□□□ -0.5
CDC42-205ENST00000498236 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
CDC42-205ENST00000498236 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
CDC42-205ENST00000498236 PLSCR2Q9NRY7 297 aa11.92□□□□□ -0.5
CDC42-205ENST00000498236 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
CDC42-205ENST00000498236 HAP1P54257 671 aaPredicted RBP11.9□□□□□ -0.5
CDC42-205ENST00000498236 TRIM26Q12899 539 aaPredicted RBP11.9□□□□□ -0.5
CDC42-205ENST00000498236 METRNQ9UJH8 293 aa11.9□□□□□ -0.5
CDC42-205ENST00000498236 CEP170Q5SW79 1584 aa11.89□□□□□ -0.51
CDC42-205ENST00000498236 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
CDC42-205ENST00000498236 MAP3K1Q13233 1512 aa11.88□□□□□ -0.51
CDC42-205ENST00000498236 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
CDC42-205ENST00000498236 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
CDC42-205ENST00000498236 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
CDC42-205ENST00000498236 FHOD3Q2V2M9 1422 aa11.86□□□□□ -0.51
CDC42-205ENST00000498236 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
CDC42-205ENST00000498236 FYCO1Q9BQS8 1478 aa11.85□□□□□ -0.51
CDC42-205ENST00000498236 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
CDC42-205ENST00000498236 DISP1Q96F81 1524 aa11.83□□□□□ -0.52
CDC42-205ENST00000498236 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
CDC42-205ENST00000498236 PAXIP1Q6ZW49 1069 aaPredicted RBP11.82□□□□□ -0.52
CDC42-205ENST00000498236 PCF11O94913 1555 aaKnown RBP11.82□□□□□ -0.52
CDC42-205ENST00000498236 CHD1O14646 1710 aa11.82□□□□□ -0.52
CDC42-205ENST00000498236 KIAA0556O60303 1618 aa11.82□□□□□ -0.52
CDC42-205ENST00000498236 P3H3Q8IVL6 736 aa11.81□□□□□ -0.52
CDC42-205ENST00000498236 RASEFQ8IZ41 740 aa11.81□□□□□ -0.52
CDC42-205ENST00000498236 PCGF6Q9BYE7 350 aa11.81□□□□□ -0.52
CDC42-205ENST00000498236 RNF25Q96BH1 459 aaPredicted RBP11.8□□□□□ -0.52
CDC42-205ENST00000498236 TIAM1Q13009 1591 aa11.79□□□□□ -0.52
CDC42-205ENST00000498236 POTEMA6NI47 508 aa11.79□□□□□ -0.52
CDC42-205ENST00000498236 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
CDC42-205ENST00000498236 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
CDC42-205ENST00000498236 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
CDC42-205ENST00000498236 CARMIL2Q6F5E8 1435 aa11.78□□□□□ -0.52
CDC42-205ENST00000498236 ATN1P54259 1190 aaPredicted RBP11.78□□□□□ -0.52
CDC42-205ENST00000498236 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
CDC42-205ENST00000498236 CFAP43Q8NDM7 1665 aa11.78□□□□□ -0.52
CDC42-205ENST00000498236 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.53
CDC42-205ENST00000498236 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
CDC42-205ENST00000498236 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
CDC42-205ENST00000498236 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.53
CDC42-205ENST00000498236 SHROOM2Q13796 1616 aa11.77□□□□□ -0.53
CDC42-205ENST00000498236 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
CDC42-205ENST00000498236 POTEJP0CG39 1038 aa11.75□□□□□ -0.53
CDC42-205ENST00000498236 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
CDC42-205ENST00000498236 LRRC9Q6ZRR7 1453 aa11.75□□□□□ -0.53
CDC42-205ENST00000498236 CLASP1Q7Z460 1538 aa11.75□□□□□ -0.53
CDC42-205ENST00000498236 MAP3K13O43283 966 aa11.74□□□□□ -0.53
CDC42-205ENST00000498236 KANK4Q5T7N3 995 aaPredicted RBP11.74□□□□□ -0.53
CDC42-205ENST00000498236 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
CDC42-205ENST00000498236 CCDC18Q5T9S5 1454 aa11.74□□□□□ -0.53
CDC42-205ENST00000498236 HECW1Q76N89 1606 aa11.74□□□□□ -0.53
CDC42-205ENST00000498236 TIE1P35590 1138 aa11.73□□□□□ -0.53
CDC42-205ENST00000498236 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
CDC42-205ENST00000498236 BMP2KQ9NSY1 1161 aaPredicted RBP11.72□□□□□ -0.53
CDC42-205ENST00000498236 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.53
CDC42-205ENST00000498236 EPRSP07814 1512 aaKnown RBP11.7□□□□□ -0.54
CDC42-205ENST00000498236 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
CDC42-205ENST00000498236 RAPGEF6Q8TEU7 1601 aa11.69□□□□□ -0.54
CDC42-205ENST00000498236 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
CDC42-205ENST00000498236 DNAJC5Q9H3Z4 198 aa11.69□□□□□ -0.54
CDC42-205ENST00000498236 PYGBP11216 843 aa11.68□□□□□ -0.54
CDC42-205ENST00000498236 NUP153P49790 1475 aaKnown RBP11.68□□□□□ -0.54
CDC42-205ENST00000498236 RRBP1Q9P2E9 1410 aaKnown RBP11.68□□□□□ -0.54
CDC42-205ENST00000498236 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
CDC42-205ENST00000498236 ATP1B4Q9UN42 357 aaPredicted RBP11.67□□□□□ -0.54
CDC42-205ENST00000498236 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
CDC42-205ENST00000498236 ABCA8O94911 1581 aa11.67□□□□□ -0.54
CDC42-205ENST00000498236 EHBP1L1Q8N3D4 1523 aa11.66□□□□□ -0.54
CDC42-205ENST00000498236 TTBK1Q5TCY1 1321 aaPredicted RBP11.66□□□□□ -0.54
CDC42-205ENST00000498236 SEC24BO95487 1268 aa11.65□□□□□ -0.54
CDC42-205ENST00000498236 FAM163AQ96GL9 167 aaPredicted RBP11.65□□□□□ -0.54
CDC42-205ENST00000498236 PTPRGP23470 1445 aa11.65□□□□□ -0.54
CDC42-205ENST00000498236 MTUS2Q5JR59 1369 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms