RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.94■■■■□ 3.5
TNFRSF4-203ENST00000497869 ZNF777Q9ULD5 760 aaPredicted RBP36.92■■■■□ 3.5
TNFRSF4-203ENST00000497869 DIP2BQ9P265 1576 aa36.89■■■■□ 3.5
TNFRSF4-203ENST00000497869 MYO5CQ9NQX4 1742 aa36.89■■■■□ 3.5
TNFRSF4-203ENST00000497869 CAMSAP2Q08AD1 1489 aa36.88■■■■□ 3.5
TNFRSF4-203ENST00000497869 ARHGAP5Q13017 1502 aa36.87■■■■□ 3.49
TNFRSF4-203ENST00000497869 ITGAEP38570 1179 aa36.87■■■■□ 3.49
TNFRSF4-203ENST00000497869 GLI2P10070 1586 aa36.86■■■■□ 3.49
TNFRSF4-203ENST00000497869 FAM69CQ0P6D2 419 aa36.85■■■■□ 3.49
TNFRSF4-203ENST00000497869 CD109Q6YHK3 1445 aa36.85■■■■□ 3.49
TNFRSF4-203ENST00000497869 PTPRKQ15262 1439 aa36.84■■■■□ 3.49
TNFRSF4-203ENST00000497869 SAMD9LQ8IVG5 1584 aa36.83■■■■□ 3.49
TNFRSF4-203ENST00000497869 ARAP3Q8WWN8 1544 aa36.82■■■■□ 3.48
TNFRSF4-203ENST00000497869 EFCAB2Q5VUJ9 269 aa36.78■■■■□ 3.48
TNFRSF4-203ENST00000497869 MAP3K4Q9Y6R4 1608 aa36.77■■■■□ 3.48
TNFRSF4-203ENST00000497869 FANCAO15360 1455 aa36.74■■■■□ 3.47
TNFRSF4-203ENST00000497869 ARHGEF12Q9NZN5 1544 aa36.74■■■■□ 3.47
TNFRSF4-203ENST00000497869 MBD5Q9P267 1494 aa36.74■■■■□ 3.47
TNFRSF4-203ENST00000497869 ABCC5O15440 1437 aa36.74■■■■□ 3.47
TNFRSF4-203ENST00000497869 HNRNPMP52272 730 aaKnown RBP eCLIP36.73■■■■□ 3.47
TNFRSF4-203ENST00000497869 DAPK1P53355 1430 aa36.7■■■■□ 3.47
TNFRSF4-203ENST00000497869 KIF13AQ9H1H9 1805 aa36.68■■■■□ 3.46
TNFRSF4-203ENST00000497869 SYCP2Q9BX26 1530 aa36.68■■■■□ 3.46
TNFRSF4-203ENST00000497869 DNMT1P26358 1616 aaKnown RBP36.68■■■■□ 3.46
TNFRSF4-203ENST00000497869 KIAA1107Q9UPP5 1409 aa36.66■■■■□ 3.46
TNFRSF4-203ENST00000497869 ABCC1P33527 1531 aa36.66■■■■□ 3.46
TNFRSF4-203ENST00000497869 AKNAQ7Z591 1439 aa36.62■■■■□ 3.45
TNFRSF4-203ENST00000497869 CHIC2Q9UKJ5 165 aa36.62■■■■□ 3.45
TNFRSF4-203ENST00000497869 PLEKHH2Q8IVE3 1493 aa36.61■■■■□ 3.45
TNFRSF4-203ENST00000497869 ARHGEF5Q12774 1597 aa36.59■■■■□ 3.45
TNFRSF4-203ENST00000497869 PPRC1Q5VV67 1664 aaKnown RBP36.59■■■■□ 3.45
TNFRSF4-203ENST00000497869 TRAPPC8Q9Y2L5 1435 aa36.59■■■■□ 3.45
TNFRSF4-203ENST00000497869 ADGRL1O94910 1474 aa36.57■■■■□ 3.44
TNFRSF4-203ENST00000497869 SCAPERQ9BY12 1400 aa36.55■■■■□ 3.44
TNFRSF4-203ENST00000497869 CCDC141Q6ZP82 1450 aa36.55■■■■□ 3.44
TNFRSF4-203ENST00000497869 NEO1Q92859 1461 aa36.54■■■■□ 3.44
TNFRSF4-203ENST00000497869 AFAP1Q8N556 730 aa36.51■■■■□ 3.44
TNFRSF4-203ENST00000497869 TSPOAP1O95153 1857 aa36.5■■■■□ 3.43
TNFRSF4-203ENST00000497869 CROCC2H7BZ55 1655 aa36.5■■■■□ 3.43
TNFRSF4-203ENST00000497869 RSPH4AQ5TD94 716 aa36.49■■■■□ 3.43
TNFRSF4-203ENST00000497869 CFAP74Q9C0B2 1584 aa36.48■■■■□ 3.43
TNFRSF4-203ENST00000497869 C9orf84Q5VXU9 1444 aa36.48■■■■□ 3.43
TNFRSF4-203ENST00000497869 RRP7BPQ9NSQ0 103 aa36.48■■■■□ 3.43
TNFRSF4-203ENST00000497869 SHANK2Q9UPX8 1470 aa36.48■■■■□ 3.43
TNFRSF4-203ENST00000497869 TRHP20396 242 aaPredicted RBP36.45■■■■□ 3.43
TNFRSF4-203ENST00000497869 ROCK1Q13464 1354 aa36.43■■■■□ 3.42
TNFRSF4-203ENST00000497869 HFM1A2PYH4 1435 aa36.43■■■■□ 3.42
TNFRSF4-203ENST00000497869 NAIPQ13075 1403 aa36.43■■■■□ 3.42
TNFRSF4-203ENST00000497869 TSPY4P0CV99 314 aa36.43■■■■□ 3.42
TNFRSF4-203ENST00000497869 TSPY10P0CW01 314 aa36.43■■■■□ 3.42
TNFRSF4-203ENST00000497869 NCOA1Q15788 1441 aa36.43■■■■□ 3.42
TNFRSF4-203ENST00000497869 ADGRL2O95490 1459 aa36.42■■■■□ 3.42
TNFRSF4-203ENST00000497869 TEX14Q8IWB6 1497 aa36.41■■■■□ 3.42
TNFRSF4-203ENST00000497869 POGZQ7Z3K3 1410 aa36.39■■■■□ 3.42
TNFRSF4-203ENST00000497869 SETD5Q9C0A6 1442 aa36.39■■■■□ 3.42
TNFRSF4-203ENST00000497869 RAPGEF3O95398 923 aa36.38■■■■□ 3.41
TNFRSF4-203ENST00000497869 MAST1Q9Y2H9 1570 aa36.37■■■■□ 3.41
TNFRSF4-203ENST00000497869 RAB3GAP2Q9H2M9 1393 aa36.37■■■■□ 3.41
TNFRSF4-203ENST00000497869 DENND4BO75064 1496 aaPredicted RBP36.34■■■■□ 3.41
TNFRSF4-203ENST00000497869 ANKRD30AQ9BXX3 1397 aa36.33■■■■□ 3.41
TNFRSF4-203ENST00000497869 ZNF518AQ6AHZ1 1483 aa36.33■■■■□ 3.41
TNFRSF4-203ENST00000497869 COL17A1Q9UMD9 1497 aaPredicted RBP36.33■■■■□ 3.41
TNFRSF4-203ENST00000497869 SPAG9O60271 1321 aaKnown RBP36.32■■■■□ 3.41
TNFRSF4-203ENST00000497869 ADGBQ8N7X0 1667 aa36.31■■■■□ 3.4
TNFRSF4-203ENST00000497869 KDM6BO15054 1643 aa36.3■■■■□ 3.4
TNFRSF4-203ENST00000497869 ZFYVE16Q7Z3T8 1539 aa36.29■■■■□ 3.4
TNFRSF4-203ENST00000497869 KDM5CP41229 1560 aa36.29■■■■□ 3.4
TNFRSF4-203ENST00000497869 FRMPD1Q5SYB0 1578 aa36.28■■■■□ 3.4
TNFRSF4-203ENST00000497869 RTEL1-TNFRSF6BF6WH68 1400 aa36.27■■■■□ 3.4
TNFRSF4-203ENST00000497869 KIF15Q9NS87 1388 aa36.26■■■■□ 3.39
TNFRSF4-203ENST00000497869 GCC2Q8IWJ2 1684 aa36.26■■■■□ 3.39
TNFRSF4-203ENST00000497869 INO80Q9ULG1 1556 aaPredicted RBP36.25■■■■□ 3.39
TNFRSF4-203ENST00000497869 RICTORQ6R327 1708 aa36.24■■■■□ 3.39
TNFRSF4-203ENST00000497869 ATP7AQ04656 1500 aa36.22■■■■□ 3.39
TNFRSF4-203ENST00000497869 PLXNC1O60486 1568 aa36.21■■■■□ 3.39
TNFRSF4-203ENST00000497869 MLH3Q9UHC1 1453 aa36.19■■■■□ 3.38
TNFRSF4-203ENST00000497869 KIDINS220Q9ULH0 1771 aa36.18■■■■□ 3.38
TNFRSF4-203ENST00000497869 HRCP23327 699 aa36.17■■■■□ 3.38
TNFRSF4-203ENST00000497869 ANKRD50Q9ULJ7 1429 aa36.16■■■■□ 3.38
TNFRSF4-203ENST00000497869 HECW2Q9P2P5 1572 aa36.13■■■■□ 3.37
TNFRSF4-203ENST00000497869 MYT1LQ9UL68 1186 aa36.11■■■■□ 3.37
TNFRSF4-203ENST00000497869 YEATS2Q9ULM3 1422 aa36.1■■■■□ 3.37
TNFRSF4-203ENST00000497869 ZMYM4Q5VZL5 1548 aa36.1■■■■□ 3.37
TNFRSF4-203ENST00000497869 DUOX2Q9NRD8 1548 aa36.08■■■■□ 3.37
TNFRSF4-203ENST00000497869 ABCA6Q8N139 1617 aa36.05■■■■□ 3.36
TNFRSF4-203ENST00000497869 DHX57Q6P158 1386 aaKnown RBP36.04■■■■□ 3.36
TNFRSF4-203ENST00000497869 DHX29Q7Z478 1369 aaKnown RBP36.01■■■■□ 3.36
TNFRSF4-203ENST00000497869 DIP2CQ9Y2E4 1556 aa36.01■■■■□ 3.35
TNFRSF4-203ENST00000497869 ERBINQ96RT1 1412 aa36■■■■□ 3.35
TNFRSF4-203ENST00000497869 A2MP01023 1474 aa35.97■■■■□ 3.35
TNFRSF4-203ENST00000497869 MAGI2Q86UL8 1455 aa35.97■■■■□ 3.35
TNFRSF4-203ENST00000497869 TRIM52Q96A61 297 aa35.94■■■■□ 3.34
TNFRSF4-203ENST00000497869 CCER1Q8TC90 406 aaPredicted RBP35.94■■■■□ 3.34
TNFRSF4-203ENST00000497869 PZPP20742 1482 aa35.87■■■■□ 3.33
TNFRSF4-203ENST00000497869 ATP10AO60312 1499 aa35.86■■■■□ 3.33
TNFRSF4-203ENST00000497869 KIF3BO15066 747 aa35.86■■■■□ 3.33
TNFRSF4-203ENST00000497869 NUP155O75694 1391 aa35.85■■■■□ 3.33
TNFRSF4-203ENST00000497869 UNC13BO14795 1591 aa35.83■■■■□ 3.33
TNFRSF4-203ENST00000497869 ARHGEF40Q8TER5 1519 aa35.83■■■■□ 3.33
TNFRSF4-203ENST00000497869 MPHOSPH9Q99550 1183 aa35.83■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms