RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 UACAQ9BZF9 1416 aa16.86■□□□□ 0.29
SNRNP200-208ENST00000497539 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
SNRNP200-208ENST00000497539 CROCC2H7BZ55 1655 aa16.86■□□□□ 0.29
SNRNP200-208ENST00000497539 ABCC10Q5T3U5 1492 aa16.86■□□□□ 0.29
SNRNP200-208ENST00000497539 PTPRGP23470 1445 aa16.84■□□□□ 0.29
SNRNP200-208ENST00000497539 GPATCH8Q9UKJ3 1502 aaKnown RBP16.84■□□□□ 0.29
SNRNP200-208ENST00000497539 CDC42BPAQ5VT25 1732 aa16.83■□□□□ 0.29
SNRNP200-208ENST00000497539 ADGBQ8N7X0 1667 aa16.83■□□□□ 0.28
SNRNP200-208ENST00000497539 DAPK1P53355 1430 aa16.82■□□□□ 0.28
SNRNP200-208ENST00000497539 ABCC2Q92887 1545 aa16.81■□□□□ 0.28
SNRNP200-208ENST00000497539 MIER1Q8N108 512 aa16.81■□□□□ 0.28
SNRNP200-208ENST00000497539 UHRF1BP1LA0JNW5 1464 aa16.8■□□□□ 0.28
SNRNP200-208ENST00000497539 CAMSAP2Q08AD1 1489 aa16.8■□□□□ 0.28
SNRNP200-208ENST00000497539 TIMELESSQ9UNS1 1208 aa16.8■□□□□ 0.28
SNRNP200-208ENST00000497539 ABCC5O15440 1437 aa16.79■□□□□ 0.28
SNRNP200-208ENST00000497539 ADGRL2O95490 1459 aa16.79■□□□□ 0.28
SNRNP200-208ENST00000497539 ERCC6L2Q5T890 1561 aa16.77■□□□□ 0.28
SNRNP200-208ENST00000497539 SHANK2Q9UPX8 1470 aa16.76■□□□□ 0.27
SNRNP200-208ENST00000497539 PREX2Q70Z35 1606 aa16.76■□□□□ 0.27
SNRNP200-208ENST00000497539 ARHGEF5Q12774 1597 aa16.75■□□□□ 0.27
SNRNP200-208ENST00000497539 KDM6BO15054 1643 aa16.74■□□□□ 0.27
SNRNP200-208ENST00000497539 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
SNRNP200-208ENST00000497539 ARID3CA6NKF2 412 aa16.71■□□□□ 0.26
SNRNP200-208ENST00000497539 KDM5BQ9UGL1 1544 aa16.7■□□□□ 0.26
SNRNP200-208ENST00000497539 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
SNRNP200-208ENST00000497539 DENND4BO75064 1496 aaPredicted RBP16.69■□□□□ 0.26
SNRNP200-208ENST00000497539 ZCCHC11Q5TAX3 1644 aaKnown RBP16.69■□□□□ 0.26
SNRNP200-208ENST00000497539 ANP32EQ9BTT0 268 aa16.67■□□□□ 0.26
SNRNP200-208ENST00000497539 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
SNRNP200-208ENST00000497539 MAST1Q9Y2H9 1570 aa16.66■□□□□ 0.26
SNRNP200-208ENST00000497539 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
SNRNP200-208ENST00000497539 SAMD9LQ8IVG5 1584 aa16.65■□□□□ 0.26
SNRNP200-208ENST00000497539 MYO5CQ9NQX4 1742 aa16.65■□□□□ 0.26
SNRNP200-208ENST00000497539 TTC37Q6PGP7 1564 aa16.65■□□□□ 0.26
SNRNP200-208ENST00000497539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.26
SNRNP200-208ENST00000497539 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
SNRNP200-208ENST00000497539 MBD5Q9P267 1494 aa16.62■□□□□ 0.25
SNRNP200-208ENST00000497539 ARAP3Q8WWN8 1544 aa16.62■□□□□ 0.25
SNRNP200-208ENST00000497539 KDM5DQ9BY66 1539 aa16.61■□□□□ 0.25
SNRNP200-208ENST00000497539 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
SNRNP200-208ENST00000497539 PLEKHH2Q8IVE3 1493 aa16.6■□□□□ 0.25
SNRNP200-208ENST00000497539 ANKRD30AQ9BXX3 1397 aa16.59■□□□□ 0.25
SNRNP200-208ENST00000497539 CCDC141Q6ZP82 1450 aa16.58■□□□□ 0.25
SNRNP200-208ENST00000497539 EIF5BO60841 1220 aaKnown RBP16.58■□□□□ 0.25
SNRNP200-208ENST00000497539 CHIC2Q9UKJ5 165 aa16.58■□□□□ 0.24
SNRNP200-208ENST00000497539 C9orf84Q5VXU9 1444 aa16.58■□□□□ 0.24
SNRNP200-208ENST00000497539 KIAA1107Q9UPP5 1409 aa16.58■□□□□ 0.24
SNRNP200-208ENST00000497539 PLXNC1O60486 1568 aa16.57■□□□□ 0.24
SNRNP200-208ENST00000497539 SIN3AQ96ST3 1273 aa16.57■□□□□ 0.24
SNRNP200-208ENST00000497539 PZPP20742 1482 aa16.57■□□□□ 0.24
SNRNP200-208ENST00000497539 RSPH4AQ5TD94 716 aa16.55■□□□□ 0.24
SNRNP200-208ENST00000497539 PPP1R15AO75807 674 aaPredicted RBP16.54■□□□□ 0.24
SNRNP200-208ENST00000497539 ARHGAP5Q13017 1502 aa16.53■□□□□ 0.24
SNRNP200-208ENST00000497539 PLCH2O75038 1416 aa16.53■□□□□ 0.24
SNRNP200-208ENST00000497539 MPHOSPH9Q99550 1183 aa16.53■□□□□ 0.24
SNRNP200-208ENST00000497539 TONSLQ96HA7 1378 aa16.52■□□□□ 0.24
SNRNP200-208ENST00000497539 ANKRD30BQ9BXX2 1392 aa16.52■□□□□ 0.23
SNRNP200-208ENST00000497539 SYCP2Q9BX26 1530 aa16.51■□□□□ 0.23
SNRNP200-208ENST00000497539 ANKRD50Q9ULJ7 1429 aa16.51■□□□□ 0.23
SNRNP200-208ENST00000497539 RPRD2Q5VT52 1461 aaKnown RBP16.51■□□□□ 0.23
SNRNP200-208ENST00000497539 ABCC1P33527 1531 aa16.51■□□□□ 0.23
SNRNP200-208ENST00000497539 ABCA9Q8IUA7 1624 aa16.5■□□□□ 0.23
SNRNP200-208ENST00000497539 UNC13BO14795 1591 aa16.5■□□□□ 0.23
SNRNP200-208ENST00000497539 WDR7Q9Y4E6 1490 aa16.48■□□□□ 0.23
SNRNP200-208ENST00000497539 TEX14Q8IWB6 1497 aa16.47■□□□□ 0.23
SNRNP200-208ENST00000497539 ZNF777Q9ULD5 760 aaPredicted RBP16.46■□□□□ 0.23
SNRNP200-208ENST00000497539 TRIM52Q96A61 297 aa16.46■□□□□ 0.23
SNRNP200-208ENST00000497539 KIF15Q9NS87 1388 aa16.44■□□□□ 0.22
SNRNP200-208ENST00000497539 ARHGEF12Q9NZN5 1544 aa16.44■□□□□ 0.22
SNRNP200-208ENST00000497539 MAGI2Q86UL8 1455 aa16.43■□□□□ 0.22
SNRNP200-208ENST00000497539 TSPY4P0CV99 314 aa16.43■□□□□ 0.22
SNRNP200-208ENST00000497539 TSPY10P0CW01 314 aa16.43■□□□□ 0.22
SNRNP200-208ENST00000497539 DUOX2Q9NRD8 1548 aa16.42■□□□□ 0.22
SNRNP200-208ENST00000497539 IQGAP3Q86VI3 1631 aa16.41■□□□□ 0.22
SNRNP200-208ENST00000497539 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
SNRNP200-208ENST00000497539 ERBINQ96RT1 1412 aa16.4■□□□□ 0.22
SNRNP200-208ENST00000497539 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.22
SNRNP200-208ENST00000497539 RTEL1-TNFRSF6BF6WH68 1400 aa16.39■□□□□ 0.21
SNRNP200-208ENST00000497539 UBE2Q2Q8WVN8 375 aa16.39■□□□□ 0.21
SNRNP200-208ENST00000497539 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
SNRNP200-208ENST00000497539 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
SNRNP200-208ENST00000497539 INO80Q9ULG1 1556 aaPredicted RBP16.37■□□□□ 0.21
SNRNP200-208ENST00000497539 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
SNRNP200-208ENST00000497539 EFCAB2Q5VUJ9 269 aa16.37■□□□□ 0.21
SNRNP200-208ENST00000497539 ZFYVE16Q7Z3T8 1539 aa16.36■□□□□ 0.21
SNRNP200-208ENST00000497539 CFAP74Q9C0B2 1584 aa16.36■□□□□ 0.21
SNRNP200-208ENST00000497539 ASXL2Q76L83 1435 aa16.35■□□□□ 0.21
SNRNP200-208ENST00000497539 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
SNRNP200-208ENST00000497539 NUP155O75694 1391 aa16.33■□□□□ 0.2
SNRNP200-208ENST00000497539 EIF2AK4Q9P2K8 1649 aaKnown RBP16.32■□□□□ 0.2
SNRNP200-208ENST00000497539 TRAPPC8Q9Y2L5 1435 aa16.31■□□□□ 0.2
SNRNP200-208ENST00000497539 POLR1AO95602 1720 aaPredicted RBP16.31■□□□□ 0.2
SNRNP200-208ENST00000497539 FANCAO15360 1455 aa16.31■□□□□ 0.2
SNRNP200-208ENST00000497539 ATP10AO60312 1499 aa16.31■□□□□ 0.2
SNRNP200-208ENST00000497539 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
SNRNP200-208ENST00000497539 L3MBTL2Q969R5 705 aa16.3■□□□□ 0.2
SNRNP200-208ENST00000497539 KCNH8Q96L42 1107 aa16.29■□□□□ 0.2
SNRNP200-208ENST00000497539 PKD2Q13563 968 aa16.28■□□□□ 0.2
SNRNP200-208ENST00000497539 FOXD1Q16676 465 aa16.28■□□□□ 0.2
SNRNP200-208ENST00000497539 ATP7AQ04656 1500 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms