RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 KDM6BO15054 1643 aa18.34■□□□□ 0.53
HLA-B-254ENST00000497377 LRRIQ1Q96JM4 1722 aa18.34■□□□□ 0.53
HLA-B-254ENST00000497377 TROQ12816 1431 aaPredicted RBP18.3■□□□□ 0.52
HLA-B-254ENST00000497377 PHLDB1Q86UU1 1377 aa18.29■□□□□ 0.52
HLA-B-254ENST00000497377 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.28■□□□□ 0.52
HLA-B-254ENST00000497377 KIF14Q15058 1648 aa18.27■□□□□ 0.51
HLA-B-254ENST00000497377 NEO1Q92859 1461 aa18.25■□□□□ 0.51
HLA-B-254ENST00000497377 TTC37Q6PGP7 1564 aa18.25■□□□□ 0.51
HLA-B-254ENST00000497377 CFAP74Q9C0B2 1584 aa18.23■□□□□ 0.51
HLA-B-254ENST00000497377 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
HLA-B-254ENST00000497377 ARAP3Q8WWN8 1544 aa18.22■□□□□ 0.51
HLA-B-254ENST00000497377 COL17A1Q9UMD9 1497 aaPredicted RBP18.2■□□□□ 0.5
HLA-B-254ENST00000497377 PLCH2O75038 1416 aa18.2■□□□□ 0.5
HLA-B-254ENST00000497377 MYO5CQ9NQX4 1742 aa18.2■□□□□ 0.5
HLA-B-254ENST00000497377 FANCAO15360 1455 aa18.19■□□□□ 0.5
HLA-B-254ENST00000497377 MTUS2Q5JR59 1369 aa18.16■□□□□ 0.5
HLA-B-254ENST00000497377 AKNAQ7Z591 1439 aa18.14■□□□□ 0.49
HLA-B-254ENST00000497377 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
HLA-B-254ENST00000497377 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
HLA-B-254ENST00000497377 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
HLA-B-254ENST00000497377 MAP3K1Q13233 1512 aa18.12■□□□□ 0.49
HLA-B-254ENST00000497377 TIAM1Q13009 1591 aa18.12■□□□□ 0.49
HLA-B-254ENST00000497377 PREX2Q70Z35 1606 aa18.11■□□□□ 0.49
HLA-B-254ENST00000497377 ARHGAP5Q13017 1502 aa18.1■□□□□ 0.49
HLA-B-254ENST00000497377 DENND4BO75064 1496 aaPredicted RBP18.1■□□□□ 0.49
HLA-B-254ENST00000497377 CDC42BPBQ9Y5S2 1711 aa18.09■□□□□ 0.49
HLA-B-254ENST00000497377 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
HLA-B-254ENST00000497377 ADGRL1O94910 1474 aa18.07■□□□□ 0.48
HLA-B-254ENST00000497377 RICTORQ6R327 1708 aa18.06■□□□□ 0.48
HLA-B-254ENST00000497377 FRMPD1Q5SYB0 1578 aa18.06■□□□□ 0.48
HLA-B-254ENST00000497377 RAPGEF3O95398 923 aa18.05■□□□□ 0.48
HLA-B-254ENST00000497377 SUPT6HQ7KZ85 1726 aaKnown RBP18.05■□□□□ 0.48
HLA-B-254ENST00000497377 SCAPERQ9BY12 1400 aa18.05■□□□□ 0.48
HLA-B-254ENST00000497377 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
HLA-B-254ENST00000497377 GPATCH8Q9UKJ3 1502 aaKnown RBP18.04■□□□□ 0.48
HLA-B-254ENST00000497377 LRRC9Q6ZRR7 1453 aa18.04■□□□□ 0.48
HLA-B-254ENST00000497377 APLP2Q06481 763 aa18.03■□□□□ 0.48
HLA-B-254ENST00000497377 ZMYM4Q5VZL5 1548 aa18.03■□□□□ 0.48
HLA-B-254ENST00000497377 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.48
HLA-B-254ENST00000497377 ITSN2Q9NZM3 1697 aa18.02■□□□□ 0.47
HLA-B-254ENST00000497377 ZNF518AQ6AHZ1 1483 aa18■□□□□ 0.47
HLA-B-254ENST00000497377 MAGI2Q86UL8 1455 aa18■□□□□ 0.47
HLA-B-254ENST00000497377 ABCC1P33527 1531 aa17.99■□□□□ 0.47
HLA-B-254ENST00000497377 CFDP1Q9UEE9 299 aaPredicted RBP17.99■□□□□ 0.47
HLA-B-254ENST00000497377 NCOA2Q15596 1464 aa17.99■□□□□ 0.47
HLA-B-254ENST00000497377 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
HLA-B-254ENST00000497377 PLEKHH2Q8IVE3 1493 aa17.98■□□□□ 0.47
HLA-B-254ENST00000497377 ARHGEF40Q8TER5 1519 aa17.97■□□□□ 0.47
HLA-B-254ENST00000497377 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.47
HLA-B-254ENST00000497377 KIAA1107Q9UPP5 1409 aa17.96■□□□□ 0.47
HLA-B-254ENST00000497377 KDM5CP41229 1560 aa17.96■□□□□ 0.46
HLA-B-254ENST00000497377 ZFYVE16Q7Z3T8 1539 aa17.94■□□□□ 0.46
HLA-B-254ENST00000497377 KANK4Q5T7N3 995 aaPredicted RBP17.94■□□□□ 0.46
HLA-B-254ENST00000497377 ZNF777Q9ULD5 760 aaPredicted RBP17.94■□□□□ 0.46
HLA-B-254ENST00000497377 ARHGEF12Q9NZN5 1544 aa17.93■□□□□ 0.46
HLA-B-254ENST00000497377 AFAP1Q8N556 730 aa17.91■□□□□ 0.46
HLA-B-254ENST00000497377 SYCP2Q9BX26 1530 aa17.91■□□□□ 0.46
HLA-B-254ENST00000497377 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
HLA-B-254ENST00000497377 TRAPPC8Q9Y2L5 1435 aa17.9■□□□□ 0.46
HLA-B-254ENST00000497377 MLH3Q9UHC1 1453 aa17.9■□□□□ 0.46
HLA-B-254ENST00000497377 CAPN15O75808 1086 aa17.9■□□□□ 0.46
HLA-B-254ENST00000497377 YEATS2Q9ULM3 1422 aa17.89■□□□□ 0.45
HLA-B-254ENST00000497377 KDM4FA0A1W2PPD8 638 aa17.88■□□□□ 0.45
HLA-B-254ENST00000497377 MYOM3Q5VTT5 1437 aa17.87■□□□□ 0.45
HLA-B-254ENST00000497377 MIA2Q96PC5 1412 aa17.87■□□□□ 0.45
HLA-B-254ENST00000497377 ATP10AO60312 1499 aa17.87■□□□□ 0.45
HLA-B-254ENST00000497377 HNRNPMP52272 730 aaKnown RBP eCLIP17.86■□□□□ 0.45
HLA-B-254ENST00000497377 SPINK5Q9NQ38 1064 aaPredicted RBP17.86■□□□□ 0.45
HLA-B-254ENST00000497377 CAMSAP2Q08AD1 1489 aa17.85■□□□□ 0.45
HLA-B-254ENST00000497377 C9orf84Q5VXU9 1444 aa17.85■□□□□ 0.45
HLA-B-254ENST00000497377 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
HLA-B-254ENST00000497377 MBD5Q9P267 1494 aa17.84■□□□□ 0.45
HLA-B-254ENST00000497377 ZNF644Q9H582 1327 aaPredicted RBP17.84■□□□□ 0.45
HLA-B-254ENST00000497377 RSPH4AQ5TD94 716 aa17.84■□□□□ 0.45
HLA-B-254ENST00000497377 SPAG9O60271 1321 aaKnown RBP17.83■□□□□ 0.44
HLA-B-254ENST00000497377 ARID4BQ4LE39 1312 aaPredicted RBP17.83■□□□□ 0.44
HLA-B-254ENST00000497377 KIDINS220Q9ULH0 1771 aa17.83■□□□□ 0.44
HLA-B-254ENST00000497377 REREQ9P2R6 1566 aa17.83■□□□□ 0.44
HLA-B-254ENST00000497377 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.44
HLA-B-254ENST00000497377 BCORL1Q5H9F3 1711 aa17.81■□□□□ 0.44
HLA-B-254ENST00000497377 ABCA6Q8N139 1617 aa17.81■□□□□ 0.44
HLA-B-254ENST00000497377 ARHGEF5Q12774 1597 aa17.81■□□□□ 0.44
HLA-B-254ENST00000497377 CCDC141Q6ZP82 1450 aa17.81■□□□□ 0.44
HLA-B-254ENST00000497377 INO80Q9ULG1 1556 aaPredicted RBP17.8■□□□□ 0.44
HLA-B-254ENST00000497377 ATP7AQ04656 1500 aa17.8■□□□□ 0.44
HLA-B-254ENST00000497377 ADAMTSL3P82987 1691 aa17.79■□□□□ 0.44
HLA-B-254ENST00000497377 RTEL1-TNFRSF6BF6WH68 1400 aa17.79■□□□□ 0.44
HLA-B-254ENST00000497377 SIGLEC1Q9BZZ2 1709 aa17.77■□□□□ 0.44
HLA-B-254ENST00000497377 AGLP35573 1532 aa17.77■□□□□ 0.43
HLA-B-254ENST00000497377 FGD6Q6ZV73 1430 aa17.76■□□□□ 0.43
HLA-B-254ENST00000497377 PTPN23Q9H3S7 1636 aa17.76■□□□□ 0.43
HLA-B-254ENST00000497377 TSPY4P0CV99 314 aa17.74■□□□□ 0.43
HLA-B-254ENST00000497377 TSPY10P0CW01 314 aa17.74■□□□□ 0.43
HLA-B-254ENST00000497377 ADGBQ8N7X0 1667 aa17.74■□□□□ 0.43
HLA-B-254ENST00000497377 TCOF1Q13428 1488 aaKnown RBP17.73■□□□□ 0.43
HLA-B-254ENST00000497377 MAST1Q9Y2H9 1570 aa17.71■□□□□ 0.43
HLA-B-254ENST00000497377 A2MP01023 1474 aa17.71■□□□□ 0.43
HLA-B-254ENST00000497377 MADDQ8WXG6 1647 aa17.71■□□□□ 0.43
HLA-B-254ENST00000497377 PLXNC1O60486 1568 aa17.7■□□□□ 0.42
HLA-B-254ENST00000497377 DSG3P32926 999 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms