RNA–Protein interactions for RNA: ENST00000497374.1

SPTSSB-203, Transcript of serine palmitoyltransferase small subunit B, humanhuman

TSL 2

Gene SPTSSB, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-203ENST00000497374 ZFP91Q96JP5 570 aaPredicted RBP9.8□□□□□ -0.84
SPTSSB-203ENST00000497374 UNC13AQ9UPW8 1703 aa9.78□□□□□ -0.84
SPTSSB-203ENST00000497374 SOX12O15370 315 aa9.77□□□□□ -0.85
SPTSSB-203ENST00000497374 PHF8Q9UPP1 1060 aa9.77□□□□□ -0.85
SPTSSB-203ENST00000497374 BICRAQ9NZM4 1560 aa9.76□□□□□ -0.85
SPTSSB-203ENST00000497374 ERBB3P21860 1342 aa9.76□□□□□ -0.85
SPTSSB-203ENST00000497374 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
SPTSSB-203ENST00000497374 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
SPTSSB-203ENST00000497374 GPR153Q6NV75 609 aa9.73□□□□□ -0.85
SPTSSB-203ENST00000497374 CC2D2AQ9P2K1 1620 aa9.72□□□□□ -0.85
SPTSSB-203ENST00000497374 RIMBP2O15034 1052 aa9.72□□□□□ -0.85
SPTSSB-203ENST00000497374 ZSWIM6Q9HCJ5 1215 aa9.72□□□□□ -0.85
SPTSSB-203ENST00000497374 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
SPTSSB-203ENST00000497374 FBXO22Q8NEZ5 403 aa9.7□□□□□ -0.86
SPTSSB-203ENST00000497374 SHROOM4Q9ULL8 1493 aa9.69□□□□□ -0.86
SPTSSB-203ENST00000497374 ZNF687Q8N1G0 1237 aa9.66□□□□□ -0.86
SPTSSB-203ENST00000497374 BCL11BQ9C0K0 894 aaPredicted RBP9.65□□□□□ -0.86
SPTSSB-203ENST00000497374 RNF166Q96A37 237 aaPredicted RBP9.64□□□□□ -0.87
SPTSSB-203ENST00000497374 MFRPQ9BY79 579 aa9.64□□□□□ -0.87
SPTSSB-203ENST00000497374 MYO15BQ96JP2 1530 aa9.63□□□□□ -0.87
SPTSSB-203ENST00000497374 NLRP6P59044 892 aa9.63□□□□□ -0.87
SPTSSB-203ENST00000497374 ARSIQ5FYB1 569 aa9.63□□□□□ -0.87
SPTSSB-203ENST00000497374 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.87
SPTSSB-203ENST00000497374 KIF3CO14782 793 aa9.62□□□□□ -0.87
SPTSSB-203ENST00000497374 MYT1LQ9UL68 1186 aa9.6□□□□□ -0.87
SPTSSB-203ENST00000497374 EIF4G1Q04637 1599 aaKnown RBP9.59□□□□□ -0.87
SPTSSB-203ENST00000497374 STK24Q9Y6E0 443 aa9.59□□□□□ -0.87
SPTSSB-203ENST00000497374 ZNF316A6NFI3 1004 aaPredicted RBP9.57□□□□□ -0.88
SPTSSB-203ENST00000497374 CUX2O14529 1486 aa9.56□□□□□ -0.88
SPTSSB-203ENST00000497374 C2orf72A6NCS6 295 aa9.56□□□□□ -0.88
SPTSSB-203ENST00000497374 STK25O00506 426 aa9.54□□□□□ -0.88
SPTSSB-203ENST00000497374 TAOK2Q9UL54 1235 aa9.54□□□□□ -0.88
SPTSSB-203ENST00000497374 PTGER2P43116 358 aa9.52□□□□□ -0.89
SPTSSB-203ENST00000497374 NUDT7P0C024 238 aa9.51□□□□□ -0.89
SPTSSB-203ENST00000497374 LSM11P83369 360 aaKnown RBP eCLIP9.51□□□□□ -0.89
SPTSSB-203ENST00000497374 PKD2Q13563 968 aa9.51□□□□□ -0.89
SPTSSB-203ENST00000497374 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
SPTSSB-203ENST00000497374 RGL2O15211 777 aa9.5□□□□□ -0.89
SPTSSB-203ENST00000497374 ECM2O94769 699 aaPredicted RBP9.5□□□□□ -0.89
SPTSSB-203ENST00000497374 SLC34A2O95436 690 aa9.49□□□□□ -0.89
SPTSSB-203ENST00000497374 ANKRD13DQ6ZTN6 518 aa9.49□□□□□ -0.89
SPTSSB-203ENST00000497374 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
SPTSSB-203ENST00000497374 PCDHGA4Q9Y5G9 962 aa9.47□□□□□ -0.89
SPTSSB-203ENST00000497374 PPP1R37O75864 691 aa9.45□□□□□ -0.9
SPTSSB-203ENST00000497374 PBX2P40425 430 aa9.44□□□□□ -0.9
SPTSSB-203ENST00000497374 AXIN2Q9Y2T1 843 aa9.44□□□□□ -0.9
SPTSSB-203ENST00000497374 KDM4FA0A1W2PPD8 638 aa9.42□□□□□ -0.9
SPTSSB-203ENST00000497374 TMC2Q8TDI7 906 aa9.41□□□□□ -0.9
SPTSSB-203ENST00000497374 ERCC6Q03468 1493 aa9.4□□□□□ -0.91
SPTSSB-203ENST00000497374 SCRIBQ14160 1630 aa9.36□□□□□ -0.91
SPTSSB-203ENST00000497374 PTCD2Q8WV60 388 aaKnown RBP9.35□□□□□ -0.91
SPTSSB-203ENST00000497374 ADGRD1Q6QNK2 874 aa9.34□□□□□ -0.91
SPTSSB-203ENST00000497374 FOXK1P85037 733 aa9.33□□□□□ -0.92
SPTSSB-203ENST00000497374 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
SPTSSB-203ENST00000497374 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
SPTSSB-203ENST00000497374 DCAF1Q9Y4B6 1507 aa9.31□□□□□ -0.92
SPTSSB-203ENST00000497374 PSDA5PKW4 1024 aaPredicted RBP9.3□□□□□ -0.92
SPTSSB-203ENST00000497374 HRO43593 1189 aa9.3□□□□□ -0.92
SPTSSB-203ENST00000497374 PSEN2P49810 448 aa9.29□□□□□ -0.92
SPTSSB-203ENST00000497374 DSG2Q14126 1118 aa9.29□□□□□ -0.92
SPTSSB-203ENST00000497374 PLPP6Q8IY26 295 aa9.29□□□□□ -0.92
SPTSSB-203ENST00000497374 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
SPTSSB-203ENST00000497374 GPHNQ9NQX3 736 aaPredicted RBP9.29□□□□□ -0.92
SPTSSB-203ENST00000497374 TK2O00142 265 aa9.27□□□□□ -0.93
SPTSSB-203ENST00000497374 PLA2G2EQ9NZK7 142 aa9.26□□□□□ -0.93
SPTSSB-203ENST00000497374 HCSTQ9UBK5 93 aa9.26□□□□□ -0.93
SPTSSB-203ENST00000497374 PPP4R3BQ5MIZ7 849 aa9.23□□□□□ -0.93
SPTSSB-203ENST00000497374 ZCCHC6Q5VYS8 1495 aaKnown RBP9.22□□□□□ -0.93
SPTSSB-203ENST00000497374 NKX1-1Q15270 411 aaPredicted RBP9.22□□□□□ -0.93
SPTSSB-203ENST00000497374 OXER1Q8TDS5 423 aa9.2□□□□□ -0.94
SPTSSB-203ENST00000497374 KCNK17Q96T54 332 aa9.18□□□□□ -0.94
SPTSSB-203ENST00000497374 CRISPLD2Q9H0B8 497 aa9.18□□□□□ -0.94
SPTSSB-203ENST00000497374 TBC1D12O60347 775 aa9.17□□□□□ -0.94
SPTSSB-203ENST00000497374 KCTD12Q96CX2 325 aaKnown RBP9.17□□□□□ -0.94
SPTSSB-203ENST00000497374 CHGAP10645 457 aaKnown RBP9.16□□□□□ -0.94
SPTSSB-203ENST00000497374 UPF1Q92900 1129 aaKnown RBP eCLIP9.15□□□□□ -0.94
SPTSSB-203ENST00000497374 VPS9D1Q9Y2B5 631 aa9.15□□□□□ -0.94
SPTSSB-203ENST00000497374 NCAPD3P42695 1498 aa9.15□□□□□ -0.95
SPTSSB-203ENST00000497374 THOC2Q8NI27 1593 aaKnown RBP9.14□□□□□ -0.95
SPTSSB-203ENST00000497374 NCKAP5LQ9HCH0 1330 aa9.13□□□□□ -0.95
SPTSSB-203ENST00000497374 BCL2L12Q9HB09 334 aa9.13□□□□□ -0.95
SPTSSB-203ENST00000497374 PPP1R15BQ5SWA1 713 aa9.12□□□□□ -0.95
SPTSSB-203ENST00000497374 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
SPTSSB-203ENST00000497374 FOSBP53539 338 aa9.11□□□□□ -0.95
SPTSSB-203ENST00000497374 SLC4A5Q9BY07 1137 aa9.11□□□□□ -0.95
SPTSSB-203ENST00000497374 NESP48681 1621 aa9.1□□□□□ -0.95
SPTSSB-203ENST00000497374 BHMG1C9JSJ3 638 aaPredicted RBP9.1□□□□□ -0.95
SPTSSB-203ENST00000497374 KCNH8Q96L42 1107 aa9.08□□□□□ -0.96
SPTSSB-203ENST00000497374 ZBED2Q9BTP6 218 aa9.08□□□□□ -0.96
SPTSSB-203ENST00000497374 ANO8Q9HCE9 1232 aaPredicted RBP9.07□□□□□ -0.96
SPTSSB-203ENST00000497374 JPH4Q96JJ6 628 aa9.06□□□□□ -0.96
SPTSSB-203ENST00000497374 PTPN5P54829 565 aa9.05□□□□□ -0.96
SPTSSB-203ENST00000497374 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
SPTSSB-203ENST00000497374 STAC3Q96MF2 364 aa9.05□□□□□ -0.96
SPTSSB-203ENST00000497374 PTPREP23469 700 aa9.04□□□□□ -0.96
SPTSSB-203ENST00000497374 ADAM33Q9BZ11 813 aa9.04□□□□□ -0.96
SPTSSB-203ENST00000497374 RYDENQ9NUL5 291 aaKnown RBP9.04□□□□□ -0.96
SPTSSB-203ENST00000497374 HMGXB3Q12766 1538 aa9.04□□□□□ -0.96
SPTSSB-203ENST00000497374 SMARCA2P51531 1590 aa9.03□□□□□ -0.96
SPTSSB-203ENST00000497374 ATAD2BQ9ULI0 1458 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms