RNA–Protein interactions for RNA: ENST00000497196.5

DDX17-210, Transcript of DEAD-box helicase 17, human

TSL 3

Gene DDX17, Length 856 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX17-210	ENST00000497196	EPRS	P07814	1512 aa	Known RBP	14.08	□□□□□ -0.16
DDX17-210	ENST00000497196	WDR7	Q9Y4E6	1490 aa		14.07	□□□□□ -0.16
DDX17-210	ENST00000497196	KCNH8	Q96L42	1107 aa		14.06	□□□□□ -0.16
DDX17-210	ENST00000497196	ZNF692	Q9BU19	519 aa	Predicted RBP	14.06	□□□□□ -0.16
DDX17-210	ENST00000497196	ARID3C	A6NKF2	412 aa		14.05	□□□□□ -0.16
DDX17-210	ENST00000497196	SPDYE1	Q8NFV5	336 aa	Predicted RBP	14.05	□□□□□ -0.16
DDX17-210	ENST00000497196	SSUH2	Q9Y2M2	353 aa		14.05	□□□□□ -0.16
DDX17-210	ENST00000497196	FHOD3	Q2V2M9	1422 aa		14.05	□□□□□ -0.16
DDX17-210	ENST00000497196	RAPGEF6	Q8TEU7	1601 aa		14.04	□□□□□ -0.16
DDX17-210	ENST00000497196	HAX1	O00165	279 aa		14.04	□□□□□ -0.16
DDX17-210	ENST00000497196	EFCAB5	A4FU69	1503 aa		14.04	□□□□□ -0.16
DDX17-210	ENST00000497196	KDM6B	O15054	1643 aa		14.04	□□□□□ -0.16
DDX17-210	ENST00000497196	ATP10B	O94823	1461 aa		14.03	□□□□□ -0.16
DDX17-210	ENST00000497196	MAP3K4	Q9Y6R4	1608 aa		14.03	□□□□□ -0.16
DDX17-210	ENST00000497196	PPRC1	Q5VV67	1664 aa	Known RBP	14.01	□□□□□ -0.17
DDX17-210	ENST00000497196	TEX14	Q8IWB6	1497 aa		14	□□□□□ -0.17
DDX17-210	ENST00000497196	CD109	Q6YHK3	1445 aa		13.98	□□□□□ -0.17
DDX17-210	ENST00000497196	CFAP43	Q8NDM7	1665 aa		13.98	□□□□□ -0.17
DDX17-210	ENST00000497196	NUP153	P49790	1475 aa	Known RBP	13.96	□□□□□ -0.17
DDX17-210	ENST00000497196	PLEKHD1	A6NEE1	506 aa		13.96	□□□□□ -0.17
DDX17-210	ENST00000497196	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.95	□□□□□ -0.18
DDX17-210	ENST00000497196	FMN1	Q68DA7	1419 aa		13.94	□□□□□ -0.18
DDX17-210	ENST00000497196	CLEC11A	Q9Y240	323 aa		13.94	□□□□□ -0.18
DDX17-210	ENST00000497196	MAGI3	Q5TCQ9	1506 aa		13.94	□□□□□ -0.18
DDX17-210	ENST00000497196	ARHGAP35	Q9NRY4	1499 aa		13.93	□□□□□ -0.18
DDX17-210	ENST00000497196	ABCA9	Q8IUA7	1624 aa		13.9	□□□□□ -0.18
DDX17-210	ENST00000497196	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.89	□□□□□ -0.19
DDX17-210	ENST00000497196	PRKAR2A	P13861	404 aa	Known RBP	13.89	□□□□□ -0.19
DDX17-210	ENST00000497196	HECW1	Q76N89	1606 aa		13.88	□□□□□ -0.19
DDX17-210	ENST00000497196	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.87	□□□□□ -0.19
DDX17-210	ENST00000497196	PHLDB1	Q86UU1	1377 aa		13.86	□□□□□ -0.19
DDX17-210	ENST00000497196	CDK13	Q14004	1512 aa	Known RBP	13.86	□□□□□ -0.19
DDX17-210	ENST00000497196	ARAP3	Q8WWN8	1544 aa		13.83	□□□□□ -0.2
DDX17-210	ENST00000497196	CLIP1	P30622	1438 aa		13.82	□□□□□ -0.2
DDX17-210	ENST00000497196	NEO1	Q92859	1461 aa		13.82	□□□□□ -0.2
DDX17-210	ENST00000497196	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
DDX17-210	ENST00000497196	KDM4F	A0A1W2PPD8	638 aa		13.8	□□□□□ -0.2
DDX17-210	ENST00000497196	EVX2	Q03828	476 aa		13.79	□□□□□ -0.2
DDX17-210	ENST00000497196	CASKIN1	Q8WXD9	1431 aa		13.79	□□□□□ -0.2
DDX17-210	ENST00000497196	CFAP74	Q9C0B2	1584 aa		13.78	□□□□□ -0.2
DDX17-210	ENST00000497196	LRRIQ1	Q96JM4	1722 aa		13.78	□□□□□ -0.2
DDX17-210	ENST00000497196	RAPGEF3	O95398	923 aa		13.77	□□□□□ -0.21
DDX17-210	ENST00000497196	PRR29	P0C7W0	189 aa		13.77	□□□□□ -0.21
DDX17-210	ENST00000497196	CCDC18	Q5T9S5	1454 aa		13.77	□□□□□ -0.21
DDX17-210	ENST00000497196	TTC37	Q6PGP7	1564 aa		13.77	□□□□□ -0.21
DDX17-210	ENST00000497196	PCF11	O94913	1555 aa	Known RBP	13.76	□□□□□ -0.21
DDX17-210	ENST00000497196	FANCA	O15360	1455 aa		13.76	□□□□□ -0.21
DDX17-210	ENST00000497196	AKNA	Q7Z591	1439 aa		13.76	□□□□□ -0.21
DDX17-210	ENST00000497196	TRO	Q12816	1431 aa	Predicted RBP	13.75	□□□□□ -0.21
DDX17-210	ENST00000497196	C19orf67	A6NJJ6	358 aa		13.75	□□□□□ -0.21
DDX17-210	ENST00000497196	FYCO1	Q9BQS8	1478 aa		13.74	□□□□□ -0.21
DDX17-210	ENST00000497196	PLCH2	O75038	1416 aa		13.74	□□□□□ -0.21
DDX17-210	ENST00000497196	KIF14	Q15058	1648 aa		13.74	□□□□□ -0.21
DDX17-210	ENST00000497196	MYO5C	Q9NQX4	1742 aa		13.73	□□□□□ -0.21
DDX17-210	ENST00000497196	EFCAB2	Q5VUJ9	269 aa		13.73	□□□□□ -0.21
DDX17-210	ENST00000497196	DENND4B	O75064	1496 aa	Predicted RBP	13.73	□□□□□ -0.21
DDX17-210	ENST00000497196	ADGRL1	O94910	1474 aa		13.73	□□□□□ -0.21
DDX17-210	ENST00000497196	CEP162	Q5TB80	1403 aa		13.72	□□□□□ -0.21
DDX17-210	ENST00000497196	LOC105371045	A0A1W2PR82	267 aa		13.71	□□□□□ -0.21
DDX17-210	ENST00000497196	FRMPD1	Q5SYB0	1578 aa		13.69	□□□□□ -0.22
DDX17-210	ENST00000497196	RICTOR	Q6R327	1708 aa		13.69	□□□□□ -0.22
DDX17-210	ENST00000497196	SCAPER	Q9BY12	1400 aa		13.68	□□□□□ -0.22
DDX17-210	ENST00000497196	ARHGAP5	Q13017	1502 aa		13.67	□□□□□ -0.22
DDX17-210	ENST00000497196	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.66	□□□□□ -0.22
DDX17-210	ENST00000497196	CDC42BPB	Q9Y5S2	1711 aa		13.65	□□□□□ -0.22
DDX17-210	ENST00000497196	MTUS2	Q5JR59	1369 aa		13.64	□□□□□ -0.23
DDX17-210	ENST00000497196	CHADL	Q6NUI6	762 aa		13.64	□□□□□ -0.23
DDX17-210	ENST00000497196	MAGI2	Q86UL8	1455 aa		13.63	□□□□□ -0.23
DDX17-210	ENST00000497196	ZMYM4	Q5VZL5	1548 aa		13.63	□□□□□ -0.23
DDX17-210	ENST00000497196	POGZ	Q7Z3K3	1410 aa		13.63	□□□□□ -0.23
DDX17-210	ENST00000497196	PREX2	Q70Z35	1606 aa		13.62	□□□□□ -0.23
DDX17-210	ENST00000497196	MYT1L	Q9UL68	1186 aa		13.62	□□□□□ -0.23
DDX17-210	ENST00000497196	CDC42BPA	Q5VT25	1732 aa		13.61	□□□□□ -0.23
DDX17-210	ENST00000497196	ZFYVE16	Q7Z3T8	1539 aa		13.61	□□□□□ -0.23
DDX17-210	ENST00000497196	ARHGEF40	Q8TER5	1519 aa		13.61	□□□□□ -0.23
DDX17-210	ENST00000497196	ZNF518A	Q6AHZ1	1483 aa		13.61	□□□□□ -0.23
DDX17-210	ENST00000497196	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX17-210	ENST00000497196	CCNB3	Q8WWL7	1395 aa		13.59	□□□□□ -0.23
DDX17-210	ENST00000497196	AFAP1	Q8N556	730 aa		13.59	□□□□□ -0.23
DDX17-210	ENST00000497196	BCORL1	Q5H9F3	1711 aa		13.59	□□□□□ -0.23
DDX17-210	ENST00000497196	YEATS2	Q9ULM3	1422 aa		13.58	□□□□□ -0.24
DDX17-210	ENST00000497196	ADAMTSL3	P82987	1691 aa		13.57	□□□□□ -0.24
DDX17-210	ENST00000497196	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.57	□□□□□ -0.24
DDX17-210	ENST00000497196	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.57	□□□□□ -0.24
DDX17-210	ENST00000497196	VPS8	Q8N3P4	1428 aa		13.56	□□□□□ -0.24
DDX17-210	ENST00000497196	ATP10A	O60312	1499 aa		13.56	□□□□□ -0.24
DDX17-210	ENST00000497196	EHBP1L1	Q8N3D4	1523 aa		13.56	□□□□□ -0.24
DDX17-210	ENST00000497196	ITSN2	Q9NZM3	1697 aa		13.56	□□□□□ -0.24
DDX17-210	ENST00000497196	ABCC1	P33527	1531 aa		13.55	□□□□□ -0.24
DDX17-210	ENST00000497196	GABBR2	O75899	941 aa		13.55	□□□□□ -0.24
DDX17-210	ENST00000497196	KDM5C	P41229	1560 aa		13.54	□□□□□ -0.24
DDX17-210	ENST00000497196	STAG3	Q9UJ98	1225 aa		13.54	□□□□□ -0.24
DDX17-210	ENST00000497196	C9orf84	Q5VXU9	1444 aa		13.54	□□□□□ -0.24
DDX17-210	ENST00000497196	TRAPPC8	Q9Y2L5	1435 aa		13.54	□□□□□ -0.24
DDX17-210	ENST00000497196	ARHGEF12	Q9NZN5	1544 aa		13.54	□□□□□ -0.24
DDX17-210	ENST00000497196	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
DDX17-210	ENST00000497196	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.53	□□□□□ -0.24
DDX17-210	ENST00000497196	SAMD9L	Q8IVG5	1584 aa		13.53	□□□□□ -0.24
DDX17-210	ENST00000497196	HECW2	Q9P2P5	1572 aa		13.53	□□□□□ -0.24
DDX17-210	ENST00000497196	MLEC	Q14165	292 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms