RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 MS4A1P11836 297 aa18.12■□□□□ 0.49
PKD1-222ENST00000496574 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
PKD1-222ENST00000496574 EXOC6Q8TAG9 804 aa18.1■□□□□ 0.49
PKD1-222ENST00000496574 NLRP13Q86W25 1043 aa18.1■□□□□ 0.49
PKD1-222ENST00000496574 SLC4A3P48751 1232 aa18.09■□□□□ 0.49
PKD1-222ENST00000496574 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
PKD1-222ENST00000496574 PKD2Q13563 968 aa18.08■□□□□ 0.48
PKD1-222ENST00000496574 RRP1P56182 461 aaKnown RBP18.07■□□□□ 0.48
PKD1-222ENST00000496574 CASC1Q6TDU7 716 aa18.07■□□□□ 0.48
PKD1-222ENST00000496574 GBP4Q96PP9 640 aa18.05■□□□□ 0.48
PKD1-222ENST00000496574 HSP90AA2PQ14568 343 aaPredicted RBP18.05■□□□□ 0.48
PKD1-222ENST00000496574 FAM161AQ3B820 660 aa18.04■□□□□ 0.48
PKD1-222ENST00000496574 ANO8Q9HCE9 1232 aaPredicted RBP18.03■□□□□ 0.48
PKD1-222ENST00000496574 ROCK2O75116 1388 aaKnown RBP18.03■□□□□ 0.48
PKD1-222ENST00000496574 MAPK8IP3Q9UPT6 1336 aa18.03■□□□□ 0.48
PKD1-222ENST00000496574 CHMP4BQ9H444 224 aaKnown RBP18.02■□□□□ 0.48
PKD1-222ENST00000496574 PLCB2Q00722 1185 aa18.02■□□□□ 0.47
PKD1-222ENST00000496574 PAK3O75914 559 aaPredicted RBP18.01■□□□□ 0.47
PKD1-222ENST00000496574 STAG3Q9UJ98 1225 aa18.01■□□□□ 0.47
PKD1-222ENST00000496574 CENPQQ7L2Z9 268 aaPredicted RBP18.01■□□□□ 0.47
PKD1-222ENST00000496574 GOLGA2Q08379 1002 aa18.01■□□□□ 0.47
PKD1-222ENST00000496574 RWDD1Q9H446 243 aaPredicted RBP18■□□□□ 0.47
PKD1-222ENST00000496574 PTMSP20962 102 aa17.99■□□□□ 0.47
PKD1-222ENST00000496574 TPRNQ4KMQ1 711 aa17.99■□□□□ 0.47
PKD1-222ENST00000496574 VSIG10Q8N0Z9 540 aa17.99■□□□□ 0.47
PKD1-222ENST00000496574 MYBBP1AQ9BQG0 1328 aaKnown RBP17.99■□□□□ 0.47
PKD1-222ENST00000496574 PLIN1O60240 522 aa17.99■□□□□ 0.47
PKD1-222ENST00000496574 MSH5O43196 834 aa17.98■□□□□ 0.47
PKD1-222ENST00000496574 IL27Q8NEV9 243 aa17.97■□□□□ 0.47
PKD1-222ENST00000496574 KIF15Q9NS87 1388 aa17.97■□□□□ 0.47
PKD1-222ENST00000496574 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
PKD1-222ENST00000496574 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
PKD1-222ENST00000496574 CRBNQ96SW2 442 aa17.96■□□□□ 0.47
PKD1-222ENST00000496574 NFKBIBQ15653 356 aa17.95■□□□□ 0.46
PKD1-222ENST00000496574 MFAP1P55081 439 aaKnown RBP17.93■□□□□ 0.46
PKD1-222ENST00000496574 CHAF1AQ13111 956 aaPredicted RBP17.93■□□□□ 0.46
PKD1-222ENST00000496574 PHLDB1Q86UU1 1377 aa17.93■□□□□ 0.46
PKD1-222ENST00000496574 CCDC18Q5T9S5 1454 aa17.93■□□□□ 0.46
PKD1-222ENST00000496574 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
PKD1-222ENST00000496574 PRKCSHP14314 528 aaPredicted RBP17.92■□□□□ 0.46
PKD1-222ENST00000496574 CDK11BP21127 795 aaKnown RBP17.92■□□□□ 0.46
PKD1-222ENST00000496574 FHOD3Q2V2M9 1422 aa17.92■□□□□ 0.46
PKD1-222ENST00000496574 CCDC7Q96M83 1385 aa17.91■□□□□ 0.46
PKD1-222ENST00000496574 ARID3AQ99856 593 aa17.9■□□□□ 0.46
PKD1-222ENST00000496574 WASHC2AQ641Q2 1341 aa17.9■□□□□ 0.46
PKD1-222ENST00000496574 KIF21BO75037 1637 aa17.9■□□□□ 0.46
PKD1-222ENST00000496574 CNTLNQ9NXG0 1405 aa17.89■□□□□ 0.46
PKD1-222ENST00000496574 ST20-MTHFSA0A0A6YYL1 179 aa17.89■□□□□ 0.45
PKD1-222ENST00000496574 BRPF3Q9ULD4 1205 aa17.89■□□□□ 0.45
PKD1-222ENST00000496574 NUP155O75694 1391 aa17.89■□□□□ 0.45
PKD1-222ENST00000496574 MORC1Q86VD1 984 aa17.89■□□□□ 0.45
PKD1-222ENST00000496574 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
PKD1-222ENST00000496574 DDX11L8A8MPP1 907 aa17.87■□□□□ 0.45
PKD1-222ENST00000496574 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
PKD1-222ENST00000496574 CENPJQ9HC77 1338 aaPredicted RBP17.86■□□□□ 0.45
PKD1-222ENST00000496574 KIAA2012Q0VF49 1180 aa17.86■□□□□ 0.45
PKD1-222ENST00000496574 KIF7Q2M1P5 1343 aa17.86■□□□□ 0.45
PKD1-222ENST00000496574 ERCC6Q03468 1493 aa17.86■□□□□ 0.45
PKD1-222ENST00000496574 IPO8O15397 1037 aaKnown RBP17.85■□□□□ 0.45
PKD1-222ENST00000496574 ZRSR1Q15695 479 aaKnown RBP17.85■□□□□ 0.45
PKD1-222ENST00000496574 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
PKD1-222ENST00000496574 USP47Q96K76 1375 aa17.85■□□□□ 0.45
PKD1-222ENST00000496574 RRBP1Q9P2E9 1410 aaKnown RBP17.85■□□□□ 0.45
PKD1-222ENST00000496574 CALD1Q05682 793 aaKnown RBP17.84■□□□□ 0.45
PKD1-222ENST00000496574 ITPRIPQ8IWB1 547 aa17.84■□□□□ 0.45
PKD1-222ENST00000496574 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
PKD1-222ENST00000496574 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.45
PKD1-222ENST00000496574 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
PKD1-222ENST00000496574 ZBTB7CA1YPR0 619 aa17.82■□□□□ 0.44
PKD1-222ENST00000496574 UACAQ9BZF9 1416 aa17.81■□□□□ 0.44
PKD1-222ENST00000496574 ANKRD30AQ9BXX3 1397 aa17.81■□□□□ 0.44
PKD1-222ENST00000496574 CGNL1Q0VF96 1302 aa17.8■□□□□ 0.44
PKD1-222ENST00000496574 ESF1Q9H501 851 aaKnown RBP17.79■□□□□ 0.44
PKD1-222ENST00000496574 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
PKD1-222ENST00000496574 MCCP23508 829 aa17.78■□□□□ 0.44
PKD1-222ENST00000496574 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
PKD1-222ENST00000496574 BACH2Q9BYV9 841 aa17.78■□□□□ 0.44
PKD1-222ENST00000496574 PANK3Q9H999 370 aa17.78■□□□□ 0.44
PKD1-222ENST00000496574 FOXD4L1Q9NU39 408 aa17.77■□□□□ 0.44
PKD1-222ENST00000496574 GOLGA6L4A6NEF3 574 aa17.76■□□□□ 0.43
PKD1-222ENST00000496574 SMC4Q9NTJ3 1288 aa17.76■□□□□ 0.43
PKD1-222ENST00000496574 SKOR2Q2VWA4 1001 aaPredicted RBP17.76■□□□□ 0.43
PKD1-222ENST00000496574 AKNAQ7Z591 1439 aa17.76■□□□□ 0.43
PKD1-222ENST00000496574 SYAP1Q96A49 352 aaPredicted RBP17.76■□□□□ 0.43
PKD1-222ENST00000496574 FRAT2O75474 233 aaPredicted RBP17.75■□□□□ 0.43
PKD1-222ENST00000496574 CHMP5Q9NZZ3 219 aa17.75■□□□□ 0.43
PKD1-222ENST00000496574 COG6Q9Y2V7 657 aa17.75■□□□□ 0.43
PKD1-222ENST00000496574 DDX49Q9Y6V7 483 aaKnown RBP17.74■□□□□ 0.43
PKD1-222ENST00000496574 NRDCO43847 1150 aa17.74■□□□□ 0.43
PKD1-222ENST00000496574 GOLGA6L6A8MZA4 724 aa17.74■□□□□ 0.43
PKD1-222ENST00000496574 E9PSI1 815 aa17.73■□□□□ 0.43
PKD1-222ENST00000496574 FAM43AQ8N2R8 423 aa17.73■□□□□ 0.43
PKD1-222ENST00000496574 FGD6Q6ZV73 1430 aa17.73■□□□□ 0.43
PKD1-222ENST00000496574 CCDC184Q52MB2 194 aa17.72■□□□□ 0.43
PKD1-222ENST00000496574 DRC7Q8IY82 874 aa17.72■□□□□ 0.43
PKD1-222ENST00000496574 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
PKD1-222ENST00000496574 ATAD2BQ9ULI0 1458 aa17.72■□□□□ 0.43
PKD1-222ENST00000496574 LRRC9Q6ZRR7 1453 aa17.72■□□□□ 0.43
PKD1-222ENST00000496574 APBB1O00213 710 aa17.71■□□□□ 0.42
PKD1-222ENST00000496574 PDS5BQ9NTI5 1447 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms