RNA–Protein interactions for RNA: ENST00000496230.5

HCN3-204, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 3, humanhuman

TSL 2

Gene HCN3, Length 3,245 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3-204ENST00000496230 HECW1Q76N89 1606 aa16.92■□□□□ 0.3
HCN3-204ENST00000496230 HFM1A2PYH4 1435 aa16.92■□□□□ 0.3
HCN3-204ENST00000496230 TSPY4P0CV99 314 aa16.91■□□□□ 0.3
HCN3-204ENST00000496230 TSPY10P0CW01 314 aa16.91■□□□□ 0.3
HCN3-204ENST00000496230 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
HCN3-204ENST00000496230 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
HCN3-204ENST00000496230 MAGI1Q96QZ7 1491 aaPredicted RBP16.91■□□□□ 0.3
HCN3-204ENST00000496230 PKD2Q13563 968 aa16.9■□□□□ 0.3
HCN3-204ENST00000496230 KDM6BO15054 1643 aa16.9■□□□□ 0.3
HCN3-204ENST00000496230 RGL3Q3MIN7 710 aa16.89■□□□□ 0.29
HCN3-204ENST00000496230 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
HCN3-204ENST00000496230 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
HCN3-204ENST00000496230 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
HCN3-204ENST00000496230 HSPA5P11021 654 aaKnown RBP16.87■□□□□ 0.29
HCN3-204ENST00000496230 ABCC5O15440 1437 aa16.86■□□□□ 0.29
HCN3-204ENST00000496230 BCANQ96GW7 911 aa16.85■□□□□ 0.29
HCN3-204ENST00000496230 DAPK1P53355 1430 aa16.83■□□□□ 0.29
HCN3-204ENST00000496230 RAPGEF6Q8TEU7 1601 aa16.83■□□□□ 0.28
HCN3-204ENST00000496230 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
HCN3-204ENST00000496230 TROQ12816 1431 aaPredicted RBP16.82■□□□□ 0.28
HCN3-204ENST00000496230 ANP32CO43423 234 aa16.82■□□□□ 0.28
HCN3-204ENST00000496230 ATP10BO94823 1461 aa16.82■□□□□ 0.28
HCN3-204ENST00000496230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.28
HCN3-204ENST00000496230 KIF14Q15058 1648 aa16.81■□□□□ 0.28
HCN3-204ENST00000496230 NUP155O75694 1391 aa16.8■□□□□ 0.28
HCN3-204ENST00000496230 ERCC6L2Q5T890 1561 aa16.79■□□□□ 0.28
HCN3-204ENST00000496230 NUP160Q12769 1436 aa16.79■□□□□ 0.28
HCN3-204ENST00000496230 C11orf95C9JLR9 678 aaPredicted RBP16.79■□□□□ 0.28
HCN3-204ENST00000496230 GPATCH8Q9UKJ3 1502 aaKnown RBP16.78■□□□□ 0.28
HCN3-204ENST00000496230 EIF4G2P78344 907 aaKnown RBP eCLIP16.76■□□□□ 0.27
HCN3-204ENST00000496230 MIA2Q96PC5 1412 aa16.76■□□□□ 0.27
HCN3-204ENST00000496230 CAMSAP2Q08AD1 1489 aa16.76■□□□□ 0.27
HCN3-204ENST00000496230 AFAP1Q8N556 730 aa16.75■□□□□ 0.27
HCN3-204ENST00000496230 DCAF11Q8TEB1 546 aa16.75■□□□□ 0.27
HCN3-204ENST00000496230 DENND4BO75064 1496 aaPredicted RBP16.72■□□□□ 0.27
HCN3-204ENST00000496230 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
HCN3-204ENST00000496230 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
HCN3-204ENST00000496230 ANKRD30AQ9BXX3 1397 aa16.71■□□□□ 0.26
HCN3-204ENST00000496230 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
HCN3-204ENST00000496230 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
HCN3-204ENST00000496230 CCDC184Q52MB2 194 aa16.69■□□□□ 0.26
HCN3-204ENST00000496230 ANKRD50Q9ULJ7 1429 aa16.69■□□□□ 0.26
HCN3-204ENST00000496230 TCOF1Q13428 1488 aaKnown RBP16.68■□□□□ 0.26
HCN3-204ENST00000496230 KIF15Q9NS87 1388 aa16.67■□□□□ 0.26
HCN3-204ENST00000496230 CHD1O14646 1710 aa16.67■□□□□ 0.26
HCN3-204ENST00000496230 IRX6P78412 446 aaPredicted RBP16.66■□□□□ 0.26
HCN3-204ENST00000496230 ANKRD30BQ9BXX2 1392 aa16.65■□□□□ 0.26
HCN3-204ENST00000496230 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
HCN3-204ENST00000496230 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
HCN3-204ENST00000496230 C9orf84Q5VXU9 1444 aa16.64■□□□□ 0.25
HCN3-204ENST00000496230 CARD11Q9BXL7 1154 aa16.63■□□□□ 0.25
HCN3-204ENST00000496230 ARHGAP5Q13017 1502 aa16.6■□□□□ 0.25
HCN3-204ENST00000496230 PRKCSHP14314 528 aaPredicted RBP16.58■□□□□ 0.25
HCN3-204ENST00000496230 FKBP8Q14318 412 aa16.58■□□□□ 0.25
HCN3-204ENST00000496230 EFCAB2Q5VUJ9 269 aa16.58■□□□□ 0.25
HCN3-204ENST00000496230 SALL2Q9Y467 1007 aaPredicted RBP16.58■□□□□ 0.25
HCN3-204ENST00000496230 CHGAP10645 457 aaKnown RBP16.58■□□□□ 0.24
HCN3-204ENST00000496230 NBPF1Q3BBV0 1214 aa16.58■□□□□ 0.24
HCN3-204ENST00000496230 ROCK1Q13464 1354 aa16.57■□□□□ 0.24
HCN3-204ENST00000496230 NPM1P06748 294 aaKnown RBP eCLIP16.57■□□□□ 0.24
HCN3-204ENST00000496230 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
HCN3-204ENST00000496230 ST20-MTHFSA0A0A6YYL1 179 aa16.57■□□□□ 0.24
HCN3-204ENST00000496230 ABCA8O94911 1581 aa16.57■□□□□ 0.24
HCN3-204ENST00000496230 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
HCN3-204ENST00000496230 DNMT1P26358 1616 aaKnown RBP16.56■□□□□ 0.24
HCN3-204ENST00000496230 MRS2Q9HD23 443 aa16.56■□□□□ 0.24
HCN3-204ENST00000496230 KIF3BO15066 747 aa16.55■□□□□ 0.24
HCN3-204ENST00000496230 PZPP20742 1482 aa16.54■□□□□ 0.24
HCN3-204ENST00000496230 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
HCN3-204ENST00000496230 ABCC10Q5T3U5 1492 aa16.53■□□□□ 0.24
HCN3-204ENST00000496230 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
HCN3-204ENST00000496230 SPAG9O60271 1321 aaKnown RBP16.52■□□□□ 0.24
HCN3-204ENST00000496230 NUTM2DQ5VT03 806 aaPredicted RBP16.52■□□□□ 0.23
HCN3-204ENST00000496230 GGT6Q6P531 493 aa16.52■□□□□ 0.23
HCN3-204ENST00000496230 SYCP2Q9BX26 1530 aa16.52■□□□□ 0.23
HCN3-204ENST00000496230 KIAA1107Q9UPP5 1409 aa16.51■□□□□ 0.23
HCN3-204ENST00000496230 PLEKHH2Q8IVE3 1493 aa16.5■□□□□ 0.23
HCN3-204ENST00000496230 KDM5BQ9UGL1 1544 aa16.49■□□□□ 0.23
HCN3-204ENST00000496230 RPRD2Q5VT52 1461 aaKnown RBP16.49■□□□□ 0.23
HCN3-204ENST00000496230 CDC42BPAQ5VT25 1732 aa16.49■□□□□ 0.23
HCN3-204ENST00000496230 GCC2Q8IWJ2 1684 aa16.48■□□□□ 0.23
HCN3-204ENST00000496230 USP47Q96K76 1375 aa16.48■□□□□ 0.23
HCN3-204ENST00000496230 TRAPPC8Q9Y2L5 1435 aa16.47■□□□□ 0.23
HCN3-204ENST00000496230 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
HCN3-204ENST00000496230 RAPGEF3O95398 923 aa16.46■□□□□ 0.23
HCN3-204ENST00000496230 MBD5Q9P267 1494 aa16.46■□□□□ 0.23
HCN3-204ENST00000496230 CCDC7Q96M83 1385 aa16.46■□□□□ 0.23
HCN3-204ENST00000496230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.45■□□□□ 0.22
HCN3-204ENST00000496230 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
HCN3-204ENST00000496230 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
HCN3-204ENST00000496230 SCAPERQ9BY12 1400 aa16.44■□□□□ 0.22
HCN3-204ENST00000496230 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
HCN3-204ENST00000496230 CCDC141Q6ZP82 1450 aa16.43■□□□□ 0.22
HCN3-204ENST00000496230 ARHGEF12Q9NZN5 1544 aa16.43■□□□□ 0.22
HCN3-204ENST00000496230 ITSN2Q9NZM3 1697 aa16.43■□□□□ 0.22
HCN3-204ENST00000496230 SAMD9LQ8IVG5 1584 aa16.42■□□□□ 0.22
HCN3-204ENST00000496230 CC2D1BQ5T0F9 858 aaKnown RBP16.42■□□□□ 0.22
HCN3-204ENST00000496230 CCDC144AA2RUR9 1427 aa16.41■□□□□ 0.22
HCN3-204ENST00000496230 NEFLP07196 543 aa16.41■□□□□ 0.22
HCN3-204ENST00000496230 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms