RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 DNMT1P26358 1616 aaKnown RBP24.29■■□□□ 1.48
HLA-A-208ENST00000496081 DAPK1P53355 1430 aa24.27■■□□□ 1.48
HLA-A-208ENST00000496081 ABCC5O15440 1437 aa24.26■■□□□ 1.47
HLA-A-208ENST00000496081 NAIPQ13075 1403 aa24.26■■□□□ 1.47
HLA-A-208ENST00000496081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.25■■□□□ 1.47
HLA-A-208ENST00000496081 CHIC2Q9UKJ5 165 aa24.25■■□□□ 1.47
HLA-A-208ENST00000496081 ZNF777Q9ULD5 760 aaPredicted RBP24.25■■□□□ 1.47
HLA-A-208ENST00000496081 CLSPNQ9HAW4 1339 aa24.25■■□□□ 1.47
HLA-A-208ENST00000496081 TTC37Q6PGP7 1564 aa24.24■■□□□ 1.47
HLA-A-208ENST00000496081 AKNAQ7Z591 1439 aa24.23■■□□□ 1.47
HLA-A-208ENST00000496081 PREX2Q70Z35 1606 aa24.23■■□□□ 1.47
HLA-A-208ENST00000496081 CDC42BPBQ9Y5S2 1711 aa24.22■■□□□ 1.47
HLA-A-208ENST00000496081 KCNH8Q96L42 1107 aa24.21■■□□□ 1.47
HLA-A-208ENST00000496081 GCC2Q8IWJ2 1684 aa24.2■■□□□ 1.46
HLA-A-208ENST00000496081 RRP7BPQ9NSQ0 103 aa24.2■■□□□ 1.46
HLA-A-208ENST00000496081 ROCK1Q13464 1354 aa24.18■■□□□ 1.46
HLA-A-208ENST00000496081 MYO5CQ9NQX4 1742 aa24.16■■□□□ 1.46
HLA-A-208ENST00000496081 CROCC2H7BZ55 1655 aa24.15■■□□□ 1.46
HLA-A-208ENST00000496081 WDR7Q9Y4E6 1490 aa24.15■■□□□ 1.46
HLA-A-208ENST00000496081 SAMD9LQ8IVG5 1584 aa24.14■■□□□ 1.46
HLA-A-208ENST00000496081 MAPKBP1O60336 1514 aa24.13■■□□□ 1.45
HLA-A-208ENST00000496081 ARHGAP5Q13017 1502 aa24.12■■□□□ 1.45
HLA-A-208ENST00000496081 KDM6BO15054 1643 aa24.1■■□□□ 1.45
HLA-A-208ENST00000496081 NPM1P06748 294 aaKnown RBP eCLIP24.1■■□□□ 1.45
HLA-A-208ENST00000496081 ADGBQ8N7X0 1667 aa24.1■■□□□ 1.45
HLA-A-208ENST00000496081 PLCH2O75038 1416 aa24.09■■□□□ 1.45
HLA-A-208ENST00000496081 ASXL2Q76L83 1435 aa24.09■■□□□ 1.45
HLA-A-208ENST00000496081 MBD5Q9P267 1494 aa24.09■■□□□ 1.45
HLA-A-208ENST00000496081 ARHGEF5Q12774 1597 aa24.09■■□□□ 1.45
HLA-A-208ENST00000496081 ADGRL2O95490 1459 aa24.08■■□□□ 1.45
HLA-A-208ENST00000496081 HNRNPMP52272 730 aaKnown RBP eCLIP24.08■■□□□ 1.44
HLA-A-208ENST00000496081 NCOA1Q15788 1441 aa24.07■■□□□ 1.44
HLA-A-208ENST00000496081 SHANK2Q9UPX8 1470 aa24.07■■□□□ 1.44
HLA-A-208ENST00000496081 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
HLA-A-208ENST00000496081 C9orf84Q5VXU9 1444 aa24.02■■□□□ 1.44
HLA-A-208ENST00000496081 SYCP2Q9BX26 1530 aa24.02■■□□□ 1.44
HLA-A-208ENST00000496081 ANKRD30AQ9BXX3 1397 aa24.02■■□□□ 1.44
HLA-A-208ENST00000496081 CCDC141Q6ZP82 1450 aa24.02■■□□□ 1.44
HLA-A-208ENST00000496081 PLEKHH2Q8IVE3 1493 aa24.02■■□□□ 1.44
HLA-A-208ENST00000496081 RSPH4AQ5TD94 716 aa24.01■■□□□ 1.43
HLA-A-208ENST00000496081 KIAA1107Q9UPP5 1409 aa24.01■■□□□ 1.43
HLA-A-208ENST00000496081 ARAP3Q8WWN8 1544 aa24.01■■□□□ 1.43
HLA-A-208ENST00000496081 TSPY4P0CV99 314 aa24.01■■□□□ 1.43
HLA-A-208ENST00000496081 TSPY10P0CW01 314 aa24.01■■□□□ 1.43
HLA-A-208ENST00000496081 EFCAB2Q5VUJ9 269 aa24.01■■□□□ 1.43
HLA-A-208ENST00000496081 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
HLA-A-208ENST00000496081 ACIN1Q9UKV3 1341 aaKnown RBP23.96■■□□□ 1.43
HLA-A-208ENST00000496081 TRIM52Q96A61 297 aa23.96■■□□□ 1.43
HLA-A-208ENST00000496081 ABCC1P33527 1531 aa23.94■■□□□ 1.42
HLA-A-208ENST00000496081 MAST1Q9Y2H9 1570 aa23.93■■□□□ 1.42
HLA-A-208ENST00000496081 DENND4BO75064 1496 aaPredicted RBP23.91■■□□□ 1.42
HLA-A-208ENST00000496081 SIN3AQ96ST3 1273 aa23.91■■□□□ 1.42
HLA-A-208ENST00000496081 ANKRD50Q9ULJ7 1429 aa23.9■■□□□ 1.42
HLA-A-208ENST00000496081 FANCAO15360 1455 aa23.89■■□□□ 1.42
HLA-A-208ENST00000496081 KIF15Q9NS87 1388 aa23.89■■□□□ 1.41
HLA-A-208ENST00000496081 MPHOSPH9Q99550 1183 aa23.88■■□□□ 1.41
HLA-A-208ENST00000496081 TRAPPC8Q9Y2L5 1435 aa23.86■■□□□ 1.41
HLA-A-208ENST00000496081 NEUROD1Q13562 356 aa23.85■■□□□ 1.41
HLA-A-208ENST00000496081 PLXNC1O60486 1568 aa23.83■■□□□ 1.41
HLA-A-208ENST00000496081 TRHP20396 242 aaPredicted RBP23.81■■□□□ 1.4
HLA-A-208ENST00000496081 CD109Q6YHK3 1445 aa23.81■■□□□ 1.4
HLA-A-208ENST00000496081 PZPP20742 1482 aa23.8■■□□□ 1.4
HLA-A-208ENST00000496081 TIMELESSQ9UNS1 1208 aa23.8■■□□□ 1.4
HLA-A-208ENST00000496081 FAM69CQ0P6D2 419 aa23.79■■□□□ 1.4
HLA-A-208ENST00000496081 ADGRL1O94910 1474 aa23.79■■□□□ 1.4
HLA-A-208ENST00000496081 AFAP1Q8N556 730 aa23.78■■□□□ 1.4
HLA-A-208ENST00000496081 SLC4A1APQ9BWU0 796 aaKnown RBP23.78■■□□□ 1.4
HLA-A-208ENST00000496081 SCAPERQ9BY12 1400 aa23.77■■□□□ 1.4
HLA-A-208ENST00000496081 RTEL1-TNFRSF6BF6WH68 1400 aa23.75■■□□□ 1.39
HLA-A-208ENST00000496081 SPAG9O60271 1321 aaKnown RBP23.74■■□□□ 1.39
HLA-A-208ENST00000496081 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
HLA-A-208ENST00000496081 FOXD1Q16676 465 aa23.74■■□□□ 1.39
HLA-A-208ENST00000496081 CFAP74Q9C0B2 1584 aa23.74■■□□□ 1.39
HLA-A-208ENST00000496081 KDM5DQ9BY66 1539 aa23.73■■□□□ 1.39
HLA-A-208ENST00000496081 DUOX2Q9NRD8 1548 aa23.73■■□□□ 1.39
HLA-A-208ENST00000496081 ZFYVE16Q7Z3T8 1539 aa23.73■■□□□ 1.39
HLA-A-208ENST00000496081 KIF13AQ9H1H9 1805 aa23.72■■□□□ 1.39
HLA-A-208ENST00000496081 NUP155O75694 1391 aa23.72■■□□□ 1.39
HLA-A-208ENST00000496081 ANKRD30BQ9BXX2 1392 aa23.71■■□□□ 1.39
HLA-A-208ENST00000496081 GLI2P10070 1586 aa23.7■■□□□ 1.38
HLA-A-208ENST00000496081 ZNF316A6NFI3 1004 aaPredicted RBP23.7■■□□□ 1.38
HLA-A-208ENST00000496081 MAP3K4Q9Y6R4 1608 aa23.69■■□□□ 1.38
HLA-A-208ENST00000496081 INO80Q9ULG1 1556 aaPredicted RBP23.69■■□□□ 1.38
HLA-A-208ENST00000496081 TONSLQ96HA7 1378 aa23.69■■□□□ 1.38
HLA-A-208ENST00000496081 ERBINQ96RT1 1412 aa23.68■■□□□ 1.38
HLA-A-208ENST00000496081 ATP7AQ04656 1500 aa23.67■■□□□ 1.38
HLA-A-208ENST00000496081 UNC13BO14795 1591 aa23.67■■□□□ 1.38
HLA-A-208ENST00000496081 PKD2Q13563 968 aa23.65■■□□□ 1.38
HLA-A-208ENST00000496081 NEO1Q92859 1461 aa23.65■■□□□ 1.38
HLA-A-208ENST00000496081 PPP1R15AO75807 674 aaPredicted RBP23.65■■□□□ 1.38
HLA-A-208ENST00000496081 ZNF518AQ6AHZ1 1483 aa23.64■■□□□ 1.38
HLA-A-208ENST00000496081 TSPOAP1O95153 1857 aa23.63■■□□□ 1.37
HLA-A-208ENST00000496081 FAM135AQ9P2D6 1515 aa23.62■■□□□ 1.37
HLA-A-208ENST00000496081 POGZQ7Z3K3 1410 aa23.61■■□□□ 1.37
HLA-A-208ENST00000496081 RPRD2Q5VT52 1461 aaKnown RBP23.61■■□□□ 1.37
HLA-A-208ENST00000496081 KIDINS220Q9ULH0 1771 aa23.6■■□□□ 1.37
HLA-A-208ENST00000496081 MAGI2Q86UL8 1455 aa23.59■■□□□ 1.37
HLA-A-208ENST00000496081 KDM5CP41229 1560 aa23.59■■□□□ 1.37
HLA-A-208ENST00000496081 MYT1LQ9UL68 1186 aa23.57■■□□□ 1.36
HLA-A-208ENST00000496081 IQGAP3Q86VI3 1631 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms