RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 VPS8Q8N3P4 1428 aa18.95■□□□□ 0.62
APTX-233ENST00000496030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
APTX-233ENST00000496030 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
APTX-233ENST00000496030 DENND4BO75064 1496 aaPredicted RBP18.95■□□□□ 0.62
APTX-233ENST00000496030 FER1L4A9Z1Z3 1794 aa18.93■□□□□ 0.62
APTX-233ENST00000496030 YEATS2Q9ULM3 1422 aa18.92■□□□□ 0.62
APTX-233ENST00000496030 FANCAO15360 1455 aa18.92■□□□□ 0.62
APTX-233ENST00000496030 TTC37Q6PGP7 1564 aa18.91■□□□□ 0.62
APTX-233ENST00000496030 PLEKHD1A6NEE1 506 aa18.91■□□□□ 0.62
APTX-233ENST00000496030 CCDC18Q5T9S5 1454 aa18.9■□□□□ 0.62
APTX-233ENST00000496030 ZMYM4Q5VZL5 1548 aa18.9■□□□□ 0.62
APTX-233ENST00000496030 SPATA31D1Q6ZQQ2 1576 aa18.9■□□□□ 0.62
APTX-233ENST00000496030 POGZQ7Z3K3 1410 aa18.9■□□□□ 0.62
APTX-233ENST00000496030 AKNAQ7Z591 1439 aa18.9■□□□□ 0.62
APTX-233ENST00000496030 MLECQ14165 292 aa18.89■□□□□ 0.61
APTX-233ENST00000496030 ZFYVE16Q7Z3T8 1539 aa18.89■□□□□ 0.61
APTX-233ENST00000496030 STRCQ7RTU9 1775 aa18.88■□□□□ 0.61
APTX-233ENST00000496030 PREX1Q8TCU6 1659 aa18.87■□□□□ 0.61
APTX-233ENST00000496030 CDK11AQ9UQ88 783 aaPredicted RBP18.86■□□□□ 0.61
APTX-233ENST00000496030 CFAP74Q9C0B2 1584 aa18.85■□□□□ 0.61
APTX-233ENST00000496030 TROQ12816 1431 aaPredicted RBP18.84■□□□□ 0.61
APTX-233ENST00000496030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.83■□□□□ 0.6
APTX-233ENST00000496030 ARHGEF12Q9NZN5 1544 aa18.81■□□□□ 0.6
APTX-233ENST00000496030 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
APTX-233ENST00000496030 MAGI2Q86UL8 1455 aa18.79■□□□□ 0.6
APTX-233ENST00000496030 KIF14Q15058 1648 aa18.78■□□□□ 0.6
APTX-233ENST00000496030 TIAM1Q13009 1591 aa18.78■□□□□ 0.6
APTX-233ENST00000496030 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
APTX-233ENST00000496030 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
APTX-233ENST00000496030 MTUS2Q5JR59 1369 aa18.73■□□□□ 0.59
APTX-233ENST00000496030 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
APTX-233ENST00000496030 SCAPERQ9BY12 1400 aa18.73■□□□□ 0.59
APTX-233ENST00000496030 ATP10AO60312 1499 aa18.72■□□□□ 0.59
APTX-233ENST00000496030 LTBP4Q8N2S1 1624 aa18.72■□□□□ 0.59
APTX-233ENST00000496030 LRRC9Q6ZRR7 1453 aa18.71■□□□□ 0.59
APTX-233ENST00000496030 C9orf84Q5VXU9 1444 aa18.71■□□□□ 0.59
APTX-233ENST00000496030 UHRF1BP1Q6BDS2 1440 aa18.71■□□□□ 0.59
APTX-233ENST00000496030 EHBP1L1Q8N3D4 1523 aa18.7■□□□□ 0.58
APTX-233ENST00000496030 SETD1BQ9UPS6 1966 aaKnown RBP18.7■□□□□ 0.58
APTX-233ENST00000496030 PLCH2O75038 1416 aa18.69■□□□□ 0.58
APTX-233ENST00000496030 PTPRTO14522 1441 aa18.68■□□□□ 0.58
APTX-233ENST00000496030 APLP2Q06481 763 aa18.65■□□□□ 0.58
APTX-233ENST00000496030 C3P01024 1663 aa18.65■□□□□ 0.58
APTX-233ENST00000496030 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.58
APTX-233ENST00000496030 MYO5CQ9NQX4 1742 aa18.64■□□□□ 0.57
APTX-233ENST00000496030 NCOA2Q15596 1464 aa18.64■□□□□ 0.57
APTX-233ENST00000496030 CDC42BPAQ5VT25 1732 aa18.63■□□□□ 0.57
APTX-233ENST00000496030 CDC42BPBQ9Y5S2 1711 aa18.63■□□□□ 0.57
APTX-233ENST00000496030 IQSEC2Q5JU85 1478 aa18.62■□□□□ 0.57
APTX-233ENST00000496030 SUPT6HQ7KZ85 1726 aaKnown RBP18.61■□□□□ 0.57
APTX-233ENST00000496030 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
APTX-233ENST00000496030 CCNB3Q8WWL7 1395 aa18.6■□□□□ 0.57
APTX-233ENST00000496030 EFCAB2Q5VUJ9 269 aa18.6■□□□□ 0.57
APTX-233ENST00000496030 DIP2CQ9Y2E4 1556 aa18.59■□□□□ 0.57
APTX-233ENST00000496030 KDM5CP41229 1560 aa18.58■□□□□ 0.56
APTX-233ENST00000496030 ARHGAP5Q13017 1502 aa18.58■□□□□ 0.56
APTX-233ENST00000496030 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
APTX-233ENST00000496030 AFAP1Q8N556 730 aa18.56■□□□□ 0.56
APTX-233ENST00000496030 ZNF518AQ6AHZ1 1483 aa18.56■□□□□ 0.56
APTX-233ENST00000496030 ABCA6Q8N139 1617 aa18.56■□□□□ 0.56
APTX-233ENST00000496030 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
APTX-233ENST00000496030 CFDP1Q9UEE9 299 aaPredicted RBP18.54■□□□□ 0.56
APTX-233ENST00000496030 TRAPPC8Q9Y2L5 1435 aa18.53■□□□□ 0.56
APTX-233ENST00000496030 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
APTX-233ENST00000496030 SAMD9LQ8IVG5 1584 aa18.51■□□□□ 0.55
APTX-233ENST00000496030 PPARGC1BQ86YN6 1023 aaKnown RBP18.51■□□□□ 0.55
APTX-233ENST00000496030 CAMSAP1Q5T5Y3 1602 aa18.51■□□□□ 0.55
APTX-233ENST00000496030 ITSN2Q9NZM3 1697 aa18.5■□□□□ 0.55
APTX-233ENST00000496030 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
APTX-233ENST00000496030 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
APTX-233ENST00000496030 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
APTX-233ENST00000496030 UBAP1LF5GYI3 381 aa18.49■□□□□ 0.55
APTX-233ENST00000496030 ABCC1P33527 1531 aa18.49■□□□□ 0.55
APTX-233ENST00000496030 MYT1LQ9UL68 1186 aa18.48■□□□□ 0.55
APTX-233ENST00000496030 AGLP35573 1532 aa18.48■□□□□ 0.55
APTX-233ENST00000496030 KIAA1107Q9UPP5 1409 aa18.47■□□□□ 0.55
APTX-233ENST00000496030 MLH3Q9UHC1 1453 aa18.46■□□□□ 0.55
APTX-233ENST00000496030 MIA2Q96PC5 1412 aa18.46■□□□□ 0.55
APTX-233ENST00000496030 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
APTX-233ENST00000496030 HNRNPMP52272 730 aaKnown RBP eCLIP18.45■□□□□ 0.54
APTX-233ENST00000496030 ESF1Q9H501 851 aaKnown RBP18.44■□□□□ 0.54
APTX-233ENST00000496030 MBD5Q9P267 1494 aa18.44■□□□□ 0.54
APTX-233ENST00000496030 MED1Q15648 1581 aaPredicted RBP18.43■□□□□ 0.54
APTX-233ENST00000496030 PLEKHH2Q8IVE3 1493 aa18.43■□□□□ 0.54
APTX-233ENST00000496030 SYCP2Q9BX26 1530 aa18.43■□□□□ 0.54
APTX-233ENST00000496030 KIDINS220Q9ULH0 1771 aa18.42■□□□□ 0.54
APTX-233ENST00000496030 FGD6Q6ZV73 1430 aa18.42■□□□□ 0.54
APTX-233ENST00000496030 CAMSAP2Q08AD1 1489 aa18.42■□□□□ 0.54
APTX-233ENST00000496030 MROH2AA6NES4 1674 aa18.41■□□□□ 0.54
APTX-233ENST00000496030 NPATQ14207 1427 aa18.4■□□□□ 0.54
APTX-233ENST00000496030 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
APTX-233ENST00000496030 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
APTX-233ENST00000496030 MYO3AQ8NEV4 1616 aa18.38■□□□□ 0.53
APTX-233ENST00000496030 PTPN23Q9H3S7 1636 aa18.38■□□□□ 0.53
APTX-233ENST00000496030 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
APTX-233ENST00000496030 HSPA1LP34931 641 aa18.37■□□□□ 0.53
APTX-233ENST00000496030 ARHGEF5Q12774 1597 aa18.35■□□□□ 0.53
APTX-233ENST00000496030 ZMYM3Q14202 1370 aa18.35■□□□□ 0.53
APTX-233ENST00000496030 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
APTX-233ENST00000496030 CLTCQ00610 1675 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms