RNA–Protein interactions for RNA: ENST00000495311.1

POLR2B-210, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-210ENST00000495311 LRRIQ1Q96JM4 1722 aa17.64■□□□□ 0.41
POLR2B-210ENST00000495311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.63■□□□□ 0.41
POLR2B-210ENST00000495311 ZMYM4Q5VZL5 1548 aa17.62■□□□□ 0.41
POLR2B-210ENST00000495311 APLP2Q06481 763 aa17.61■□□□□ 0.41
POLR2B-210ENST00000495311 TIAM1Q13009 1591 aa17.6■□□□□ 0.41
POLR2B-210ENST00000495311 CFAP74Q9C0B2 1584 aa17.58■□□□□ 0.41
POLR2B-210ENST00000495311 MTUS2Q5JR59 1369 aa17.58■□□□□ 0.4
POLR2B-210ENST00000495311 LRRC9Q6ZRR7 1453 aa17.57■□□□□ 0.4
POLR2B-210ENST00000495311 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
POLR2B-210ENST00000495311 AKNAQ7Z591 1439 aa17.55■□□□□ 0.4
POLR2B-210ENST00000495311 FER1L4A9Z1Z3 1794 aa17.54■□□□□ 0.4
POLR2B-210ENST00000495311 FANCAO15360 1455 aa17.54■□□□□ 0.4
POLR2B-210ENST00000495311 DENND4BO75064 1496 aaPredicted RBP17.54■□□□□ 0.4
POLR2B-210ENST00000495311 YEATS2Q9ULM3 1422 aa17.54■□□□□ 0.4
POLR2B-210ENST00000495311 EHBP1L1Q8N3D4 1523 aa17.53■□□□□ 0.4
POLR2B-210ENST00000495311 ZFYVE16Q7Z3T8 1539 aa17.52■□□□□ 0.39
POLR2B-210ENST00000495311 PLCH2O75038 1416 aa17.5■□□□□ 0.39
POLR2B-210ENST00000495311 FBXO41Q8TF61 875 aa17.5■□□□□ 0.39
POLR2B-210ENST00000495311 KIF14Q15058 1648 aa17.5■□□□□ 0.39
POLR2B-210ENST00000495311 MYO5CQ9NQX4 1742 aa17.48■□□□□ 0.39
POLR2B-210ENST00000495311 POGZQ7Z3K3 1410 aa17.46■□□□□ 0.39
POLR2B-210ENST00000495311 NCOA2Q15596 1464 aa17.45■□□□□ 0.38
POLR2B-210ENST00000495311 ARHGEF12Q9NZN5 1544 aa17.45■□□□□ 0.38
POLR2B-210ENST00000495311 GPATCH8Q9UKJ3 1502 aaKnown RBP17.45■□□□□ 0.38
POLR2B-210ENST00000495311 MAGI2Q86UL8 1455 aa17.44■□□□□ 0.38
POLR2B-210ENST00000495311 CCNB3Q8WWL7 1395 aa17.43■□□□□ 0.38
POLR2B-210ENST00000495311 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
POLR2B-210ENST00000495311 STRCQ7RTU9 1775 aa17.42■□□□□ 0.38
POLR2B-210ENST00000495311 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
POLR2B-210ENST00000495311 SUPT6HQ7KZ85 1726 aaKnown RBP17.41■□□□□ 0.38
POLR2B-210ENST00000495311 ARID4BQ4LE39 1312 aaPredicted RBP17.41■□□□□ 0.38
POLR2B-210ENST00000495311 KDM5CP41229 1560 aa17.4■□□□□ 0.38
POLR2B-210ENST00000495311 HSPA2P54652 639 aa17.4■□□□□ 0.38
POLR2B-210ENST00000495311 CDC42BPBQ9Y5S2 1711 aa17.4■□□□□ 0.38
POLR2B-210ENST00000495311 CFDP1Q9UEE9 299 aaPredicted RBP17.39■□□□□ 0.37
POLR2B-210ENST00000495311 SCAPERQ9BY12 1400 aa17.38■□□□□ 0.37
POLR2B-210ENST00000495311 MIA2Q96PC5 1412 aa17.38■□□□□ 0.37
POLR2B-210ENST00000495311 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
POLR2B-210ENST00000495311 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
POLR2B-210ENST00000495311 ABCA6Q8N139 1617 aa17.36■□□□□ 0.37
POLR2B-210ENST00000495311 ATP10AO60312 1499 aa17.34■□□□□ 0.37
POLR2B-210ENST00000495311 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
POLR2B-210ENST00000495311 PREX2Q70Z35 1606 aa17.34■□□□□ 0.37
POLR2B-210ENST00000495311 REREQ9P2R6 1566 aa17.33■□□□□ 0.37
POLR2B-210ENST00000495311 KIAA1107Q9UPP5 1409 aa17.33■□□□□ 0.36
POLR2B-210ENST00000495311 CDC42BPAQ5VT25 1732 aa17.33■□□□□ 0.36
POLR2B-210ENST00000495311 C3P01024 1663 aa17.32■□□□□ 0.36
POLR2B-210ENST00000495311 ARHGAP5Q13017 1502 aa17.32■□□□□ 0.36
POLR2B-210ENST00000495311 SETD1BQ9UPS6 1966 aaKnown RBP17.31■□□□□ 0.36
POLR2B-210ENST00000495311 ITSN2Q9NZM3 1697 aa17.31■□□□□ 0.36
POLR2B-210ENST00000495311 PLEKHH2Q8IVE3 1493 aa17.31■□□□□ 0.36
POLR2B-210ENST00000495311 RSPH4AQ5TD94 716 aa17.3■□□□□ 0.36
POLR2B-210ENST00000495311 PPARGC1BQ86YN6 1023 aaKnown RBP17.3■□□□□ 0.36
POLR2B-210ENST00000495311 FGD6Q6ZV73 1430 aa17.3■□□□□ 0.36
POLR2B-210ENST00000495311 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
POLR2B-210ENST00000495311 KIDINS220Q9ULH0 1771 aa17.28■□□□□ 0.36
POLR2B-210ENST00000495311 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
POLR2B-210ENST00000495311 ABCC1P33527 1531 aa17.28■□□□□ 0.36
POLR2B-210ENST00000495311 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
POLR2B-210ENST00000495311 MLECQ14165 292 aa17.27■□□□□ 0.36
POLR2B-210ENST00000495311 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
POLR2B-210ENST00000495311 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
POLR2B-210ENST00000495311 MBD5Q9P267 1494 aa17.26■□□□□ 0.35
POLR2B-210ENST00000495311 ZNF777Q9ULD5 760 aaPredicted RBP17.26■□□□□ 0.35
POLR2B-210ENST00000495311 SAMD9LQ8IVG5 1584 aa17.25■□□□□ 0.35
POLR2B-210ENST00000495311 RRBP1Q9P2E9 1410 aaKnown RBP17.23■□□□□ 0.35
POLR2B-210ENST00000495311 CEBPAP49715 358 aaPredicted RBP17.23■□□□□ 0.35
POLR2B-210ENST00000495311 HNRNPMP52272 730 aaKnown RBP eCLIP17.23■□□□□ 0.35
POLR2B-210ENST00000495311 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
POLR2B-210ENST00000495311 CAMSAP2Q08AD1 1489 aa17.23■□□□□ 0.35
POLR2B-210ENST00000495311 MLH3Q9UHC1 1453 aa17.23■□□□□ 0.35
POLR2B-210ENST00000495311 AGLP35573 1532 aa17.22■□□□□ 0.35
POLR2B-210ENST00000495311 TRAPPC8Q9Y2L5 1435 aa17.21■□□□□ 0.35
POLR2B-210ENST00000495311 AFAP1Q8N556 730 aa17.21■□□□□ 0.35
POLR2B-210ENST00000495311 PTPN23Q9H3S7 1636 aa17.19■□□□□ 0.34
POLR2B-210ENST00000495311 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
POLR2B-210ENST00000495311 LTBP4Q8N2S1 1624 aa17.18■□□□□ 0.34
POLR2B-210ENST00000495311 SYCP2Q9BX26 1530 aa17.18■□□□□ 0.34
POLR2B-210ENST00000495311 MROH2AA6NES4 1674 aa17.17■□□□□ 0.34
POLR2B-210ENST00000495311 RTEL1-TNFRSF6BF6WH68 1400 aa17.17■□□□□ 0.34
POLR2B-210ENST00000495311 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
POLR2B-210ENST00000495311 ABCC5O15440 1437 aa17.15■□□□□ 0.34
POLR2B-210ENST00000495311 UHRF1BP1Q6BDS2 1440 aa17.15■□□□□ 0.34
POLR2B-210ENST00000495311 TSPY4P0CV99 314 aa17.15■□□□□ 0.34
POLR2B-210ENST00000495311 TSPY10P0CW01 314 aa17.15■□□□□ 0.34
POLR2B-210ENST00000495311 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
POLR2B-210ENST00000495311 SPAG9O60271 1321 aaKnown RBP17.14■□□□□ 0.33
POLR2B-210ENST00000495311 PLXNC1O60486 1568 aa17.13■□□□□ 0.33
POLR2B-210ENST00000495311 INO80Q9ULG1 1556 aaPredicted RBP17.12■□□□□ 0.33
POLR2B-210ENST00000495311 DAPK1P53355 1430 aa17.12■□□□□ 0.33
POLR2B-210ENST00000495311 ZNF142P52746 1687 aaPredicted RBP17.11■□□□□ 0.33
POLR2B-210ENST00000495311 PTPRTO14522 1441 aa17.11■□□□□ 0.33
POLR2B-210ENST00000495311 SHANK2Q9UPX8 1470 aa17.11■□□□□ 0.33
POLR2B-210ENST00000495311 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
POLR2B-210ENST00000495311 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
POLR2B-210ENST00000495311 CLTCQ00610 1675 aaKnown RBP17.09■□□□□ 0.33
POLR2B-210ENST00000495311 MYO3AQ8NEV4 1616 aa17.08■□□□□ 0.32
POLR2B-210ENST00000495311 MAST1Q9Y2H9 1570 aa17.08■□□□□ 0.32
POLR2B-210ENST00000495311 PTPRKQ15262 1439 aa17.06■□□□□ 0.32
POLR2B-210ENST00000495311 ROCK1Q13464 1354 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms