RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 KIAA1211Q6ZU35 1233 aa8.17□□□□□ -1.1
FGD4-208ENST00000494977 TRIM44Q96DX7 344 aaPredicted RBP8.17□□□□□ -1.1
FGD4-208ENST00000494977 RNF123Q5XPI4 1314 aa8.17□□□□□ -1.1
FGD4-208ENST00000494977 LETM1O95202 739 aaPredicted RBP8.16□□□□□ -1.1
FGD4-208ENST00000494977 GTPBP4Q9BZE4 634 aaKnown RBP8.16□□□□□ -1.1
FGD4-208ENST00000494977 SMG6Q86US8 1419 aaKnown RBP8.15□□□□□ -1.1
FGD4-208ENST00000494977 XRCC6P12956 609 aaKnown RBP eCLIP8.15□□□□□ -1.1
FGD4-208ENST00000494977 HSP90B1P14625 803 aaKnown RBP8.15□□□□□ -1.1
FGD4-208ENST00000494977 IRX3P78415 501 aaPredicted RBP8.15□□□□□ -1.1
FGD4-208ENST00000494977 POGKQ9P215 609 aa8.15□□□□□ -1.1
FGD4-208ENST00000494977 BAZ1BQ9UIG0 1483 aaKnown RBP8.15□□□□□ -1.1
FGD4-208ENST00000494977 SMARCA2P51531 1590 aa8.15□□□□□ -1.1
FGD4-208ENST00000494977 WDR97A6NE52 1622 aa8.15□□□□□ -1.1
FGD4-208ENST00000494977 VGLL3A8MV65 326 aa8.14□□□□□ -1.11
FGD4-208ENST00000494977 MYH16Q9H6N6 1097 aa8.14□□□□□ -1.11
FGD4-208ENST00000494977 CUX2O14529 1486 aa8.13□□□□□ -1.11
FGD4-208ENST00000494977 MRE11P49959 708 aa8.13□□□□□ -1.11
FGD4-208ENST00000494977 DNTTIP2Q5QJE6 756 aaKnown RBP8.13□□□□□ -1.11
FGD4-208ENST00000494977 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.13□□□□□ -1.11
FGD4-208ENST00000494977 FAM13BQ9NYF5 915 aa8.13□□□□□ -1.11
FGD4-208ENST00000494977 FSD2A1L4K1 749 aa8.13□□□□□ -1.11
FGD4-208ENST00000494977 CNKSR2Q8WXI2 1034 aa8.13□□□□□ -1.11
FGD4-208ENST00000494977 SLC4A3P48751 1232 aa8.12□□□□□ -1.11
FGD4-208ENST00000494977 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
FGD4-208ENST00000494977 RNF216Q9NWF9 866 aaPredicted RBP8.12□□□□□ -1.11
FGD4-208ENST00000494977 UBTFP17480 764 aaKnown RBP8.12□□□□□ -1.11
FGD4-208ENST00000494977 ISY1Q9ULR0 285 aaKnown RBP8.12□□□□□ -1.11
FGD4-208ENST00000494977 RSF1Q96T23 1441 aaPredicted RBP8.12□□□□□ -1.11
FGD4-208ENST00000494977 ZSCAN20P17040 1043 aaPredicted RBP8.11□□□□□ -1.11
FGD4-208ENST00000494977 NUDCQ9Y266 331 aa8.11□□□□□ -1.11
FGD4-208ENST00000494977 CEP164Q9UPV0 1460 aa8.11□□□□□ -1.11
FGD4-208ENST00000494977 AKNAQ7Z591 1439 aa8.11□□□□□ -1.11
FGD4-208ENST00000494977 OFD1O75665 1012 aa8.11□□□□□ -1.11
FGD4-208ENST00000494977 RIPK4P57078 832 aa8.11□□□□□ -1.11
FGD4-208ENST00000494977 PRDM10Q9NQV6 1147 aa8.11□□□□□ -1.11
FGD4-208ENST00000494977 CCDC94Q9BW85 323 aaPredicted RBP8.1□□□□□ -1.11
FGD4-208ENST00000494977 CLGNO14967 610 aa8.09□□□□□ -1.11
FGD4-208ENST00000494977 NPM3O75607 178 aaKnown RBP8.09□□□□□ -1.11
FGD4-208ENST00000494977 C14orf37Q86TY3 774 aa8.09□□□□□ -1.11
FGD4-208ENST00000494977 VPS8Q8N3P4 1428 aa8.09□□□□□ -1.11
FGD4-208ENST00000494977 DCAF8L2P0C7V8 631 aa8.09□□□□□ -1.11
FGD4-208ENST00000494977 DYNC1I1O14576 645 aa8.08□□□□□ -1.12
FGD4-208ENST00000494977 POTEDQ86YR6 584 aa8.08□□□□□ -1.12
FGD4-208ENST00000494977 SLC4A1APQ9BWU0 796 aaKnown RBP8.08□□□□□ -1.12
FGD4-208ENST00000494977 GOLGA3Q08378 1498 aa8.08□□□□□ -1.12
FGD4-208ENST00000494977 PTMSP20962 102 aa8.08□□□□□ -1.12
FGD4-208ENST00000494977 PANK2Q9BZ23 570 aa8.08□□□□□ -1.12
FGD4-208ENST00000494977 MAPKBP1O60336 1514 aa8.07□□□□□ -1.12
FGD4-208ENST00000494977 ERBB4Q15303 1308 aa8.07□□□□□ -1.12
FGD4-208ENST00000494977 SLC20A2Q08357 652 aa8.07□□□□□ -1.12
FGD4-208ENST00000494977 FAM9BQ8IZU0 186 aa8.07□□□□□ -1.12
FGD4-208ENST00000494977 DNAJC2Q99543 621 aaKnown RBP8.07□□□□□ -1.12
FGD4-208ENST00000494977 MAPK8IP2Q13387 824 aaPredicted RBP8.06□□□□□ -1.12
FGD4-208ENST00000494977 CNPY4Q8N129 248 aa8.06□□□□□ -1.12
FGD4-208ENST00000494977 AXDND1Q5T1B0 1012 aaPredicted RBP8.06□□□□□ -1.12
FGD4-208ENST00000494977 HIRIP3Q9BW71 556 aaPredicted RBP8.06□□□□□ -1.12
FGD4-208ENST00000494977 CLIP1P30622 1438 aa8.05□□□□□ -1.12
FGD4-208ENST00000494977 MSNP26038 577 aaKnown RBP8.05□□□□□ -1.12
FGD4-208ENST00000494977 MMP14P50281 582 aa8.05□□□□□ -1.12
FGD4-208ENST00000494977 GRPEL1Q9HAV7 217 aa8.05□□□□□ -1.12
FGD4-208ENST00000494977 BECN1Q14457 450 aa8.04□□□□□ -1.12
FGD4-208ENST00000494977 MRS2Q9HD23 443 aa8.04□□□□□ -1.12
FGD4-208ENST00000494977 APPP05067 770 aa8.04□□□□□ -1.12
FGD4-208ENST00000494977 PTMAP06454 111 aaKnown RBP8.04□□□□□ -1.12
FGD4-208ENST00000494977 ZSCAN30Q86W11 494 aa8.04□□□□□ -1.12
FGD4-208ENST00000494977 PHLDB1Q86UU1 1377 aa8.03□□□□□ -1.12
FGD4-208ENST00000494977 UQCRHLA0A096LP55 91 aa8.03□□□□□ -1.12
FGD4-208ENST00000494977 UQCRHP07919 91 aa8.03□□□□□ -1.12
FGD4-208ENST00000494977 WWC1Q8IX03 1113 aa8.03□□□□□ -1.12
FGD4-208ENST00000494977 ZNF622Q969S3 477 aaKnown RBP eCLIP8.03□□□□□ -1.12
FGD4-208ENST00000494977 HDAC5Q9UQL6 1122 aa8.03□□□□□ -1.12
FGD4-208ENST00000494977 FAM161AQ3B820 660 aa8.03□□□□□ -1.12
FGD4-208ENST00000494977 R3HCC1Q9Y3T6 440 aaKnown RBP8.02□□□□□ -1.13
FGD4-208ENST00000494977 RRBP1Q9P2E9 1410 aaKnown RBP8.02□□□□□ -1.13
FGD4-208ENST00000494977 FBXO3Q9UK99 471 aa8.02□□□□□ -1.13
FGD4-208ENST00000494977 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
FGD4-208ENST00000494977 CGNQ9P2M7 1197 aaKnown RBP8.01□□□□□ -1.13
FGD4-208ENST00000494977 FAM193AP78312 1265 aa8.01□□□□□ -1.13
FGD4-208ENST00000494977 CCDC173Q0VFZ6 552 aa8.01□□□□□ -1.13
FGD4-208ENST00000494977 ARID3AQ99856 593 aa8.01□□□□□ -1.13
FGD4-208ENST00000494977 E9PSI1 815 aa8□□□□□ -1.13
FGD4-208ENST00000494977 RRP1P56182 461 aaKnown RBP8□□□□□ -1.13
FGD4-208ENST00000494977 EXOC6Q8TAG9 804 aa8□□□□□ -1.13
FGD4-208ENST00000494977 AMER1Q5JTC6 1135 aaPredicted RBP8□□□□□ -1.13
FGD4-208ENST00000494977 RAB3GAP2Q9H2M9 1393 aa7.99□□□□□ -1.13
FGD4-208ENST00000494977 YY1AP1Q9H869 796 aa7.99□□□□□ -1.13
FGD4-208ENST00000494977 KCNG1Q9UIX4 513 aa7.99□□□□□ -1.13
FGD4-208ENST00000494977 IRX5P78411 483 aaPredicted RBP7.98□□□□□ -1.13
FGD4-208ENST00000494977 TSPYL1Q9H0U9 437 aa7.98□□□□□ -1.13
FGD4-208ENST00000494977 GZF1Q9H116 711 aaPredicted RBP7.98□□□□□ -1.13
FGD4-208ENST00000494977 PRKRIP1Q9H875 184 aaPredicted RBP7.98□□□□□ -1.13
FGD4-208ENST00000494977 CNTLNQ9NXG0 1405 aa7.98□□□□□ -1.13
FGD4-208ENST00000494977 ABCC8Q09428 1581 aa7.98□□□□□ -1.13
FGD4-208ENST00000494977 CCDC184Q52MB2 194 aa7.98□□□□□ -1.13
FGD4-208ENST00000494977 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.98□□□□□ -1.13
FGD4-208ENST00000494977 CCDC66A2RUB6 948 aa7.97□□□□□ -1.13
FGD4-208ENST00000494977 TRAK2O60296 914 aa7.97□□□□□ -1.13
FGD4-208ENST00000494977 MCM4P33991 863 aa7.97□□□□□ -1.13
FGD4-208ENST00000494977 HS1BP3Q53T59 392 aa7.97□□□□□ -1.13
FGD4-208ENST00000494977 SASS6Q6UVJ0 657 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms