RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 AFAP1Q8N556 730 aa22.74■■□□□ 1.23
SCAP-213ENST00000494938 CFAP74Q9C0B2 1584 aa22.74■■□□□ 1.23
SCAP-213ENST00000494938 KANK4Q5T7N3 995 aaPredicted RBP22.72■■□□□ 1.23
SCAP-213ENST00000494938 CCNB3Q8WWL7 1395 aa22.72■■□□□ 1.23
SCAP-213ENST00000494938 CFDP1Q9UEE9 299 aaPredicted RBP22.71■■□□□ 1.23
SCAP-213ENST00000494938 POGZQ7Z3K3 1410 aa22.71■■□□□ 1.23
SCAP-213ENST00000494938 MYO5CQ9NQX4 1742 aa22.71■■□□□ 1.23
SCAP-213ENST00000494938 ZNF777Q9ULD5 760 aaPredicted RBP22.7■■□□□ 1.22
SCAP-213ENST00000494938 ARHGEF12Q9NZN5 1544 aa22.67■■□□□ 1.22
SCAP-213ENST00000494938 EHBP1L1Q8N3D4 1523 aa22.67■■□□□ 1.22
SCAP-213ENST00000494938 RICTORQ6R327 1708 aa22.66■■□□□ 1.22
SCAP-213ENST00000494938 CDC42BPBQ9Y5S2 1711 aa22.66■■□□□ 1.22
SCAP-213ENST00000494938 TIAM1Q13009 1591 aa22.66■■□□□ 1.22
SCAP-213ENST00000494938 YEATS2Q9ULM3 1422 aa22.65■■□□□ 1.22
SCAP-213ENST00000494938 HNRNPMP52272 730 aaKnown RBP eCLIP22.65■■□□□ 1.22
SCAP-213ENST00000494938 MAP3K1Q13233 1512 aa22.65■■□□□ 1.22
SCAP-213ENST00000494938 LRRC9Q6ZRR7 1453 aa22.65■■□□□ 1.22
SCAP-213ENST00000494938 MAGI2Q86UL8 1455 aa22.65■■□□□ 1.22
SCAP-213ENST00000494938 TRAPPC8Q9Y2L5 1435 aa22.65■■□□□ 1.22
SCAP-213ENST00000494938 PREX2Q70Z35 1606 aa22.64■■□□□ 1.22
SCAP-213ENST00000494938 ZNF644Q9H582 1327 aaPredicted RBP22.64■■□□□ 1.22
SCAP-213ENST00000494938 ZMYM4Q5VZL5 1548 aa22.63■■□□□ 1.21
SCAP-213ENST00000494938 NCOA2Q15596 1464 aa22.61■■□□□ 1.21
SCAP-213ENST00000494938 ZNF518AQ6AHZ1 1483 aa22.61■■□□□ 1.21
SCAP-213ENST00000494938 CDC42BPAQ5VT25 1732 aa22.61■■□□□ 1.21
SCAP-213ENST00000494938 ARID4BQ4LE39 1312 aaPredicted RBP22.59■■□□□ 1.21
SCAP-213ENST00000494938 KIAA1107Q9UPP5 1409 aa22.59■■□□□ 1.21
SCAP-213ENST00000494938 ABCC1P33527 1531 aa22.59■■□□□ 1.21
SCAP-213ENST00000494938 APLP2Q06481 763 aa22.59■■□□□ 1.21
SCAP-213ENST00000494938 ZFYVE16Q7Z3T8 1539 aa22.57■■□□□ 1.2
SCAP-213ENST00000494938 SAMD9LQ8IVG5 1584 aa22.56■■□□□ 1.2
SCAP-213ENST00000494938 MYT1LQ9UL68 1186 aa22.56■■□□□ 1.2
SCAP-213ENST00000494938 ARHGEF40Q8TER5 1519 aa22.56■■□□□ 1.2
SCAP-213ENST00000494938 ATP10AO60312 1499 aa22.55■■□□□ 1.2
SCAP-213ENST00000494938 MLH3Q9UHC1 1453 aa22.55■■□□□ 1.2
SCAP-213ENST00000494938 KDM5CP41229 1560 aa22.55■■□□□ 1.2
SCAP-213ENST00000494938 PLEKHH2Q8IVE3 1493 aa22.54■■□□□ 1.2
SCAP-213ENST00000494938 SPAG9O60271 1321 aaKnown RBP22.52■■□□□ 1.2
SCAP-213ENST00000494938 MBD5Q9P267 1494 aa22.51■■□□□ 1.19
SCAP-213ENST00000494938 SYCP2Q9BX26 1530 aa22.51■■□□□ 1.19
SCAP-213ENST00000494938 SUPT6HQ7KZ85 1726 aaKnown RBP22.5■■□□□ 1.19
SCAP-213ENST00000494938 C9orf84Q5VXU9 1444 aa22.48■■□□□ 1.19
SCAP-213ENST00000494938 ITSN2Q9NZM3 1697 aa22.47■■□□□ 1.19
SCAP-213ENST00000494938 MLECQ14165 292 aa22.47■■□□□ 1.19
SCAP-213ENST00000494938 RSPH4AQ5TD94 716 aa22.45■■□□□ 1.18
SCAP-213ENST00000494938 HECW2Q9P2P5 1572 aa22.44■■□□□ 1.18
SCAP-213ENST00000494938 SIGLEC1Q9BZZ2 1709 aa22.43■■□□□ 1.18
SCAP-213ENST00000494938 ADAMTSL3P82987 1691 aa22.42■■□□□ 1.18
SCAP-213ENST00000494938 MYOM3Q5VTT5 1437 aa22.42■■□□□ 1.18
SCAP-213ENST00000494938 DIP2CQ9Y2E4 1556 aa22.42■■□□□ 1.18
SCAP-213ENST00000494938 CAMSAP2Q08AD1 1489 aa22.41■■□□□ 1.18
SCAP-213ENST00000494938 MIA2Q96PC5 1412 aa22.41■■□□□ 1.18
SCAP-213ENST00000494938 BCORL1Q5H9F3 1711 aa22.4■■□□□ 1.18
SCAP-213ENST00000494938 KIDINS220Q9ULH0 1771 aa22.39■■□□□ 1.17
SCAP-213ENST00000494938 PTPRMP28827 1452 aa22.39■■□□□ 1.17
SCAP-213ENST00000494938 ABCA6Q8N139 1617 aa22.38■■□□□ 1.17
SCAP-213ENST00000494938 RTEL1-TNFRSF6BF6WH68 1400 aa22.37■■□□□ 1.17
SCAP-213ENST00000494938 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
SCAP-213ENST00000494938 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
SCAP-213ENST00000494938 REREQ9P2R6 1566 aa22.36■■□□□ 1.17
SCAP-213ENST00000494938 CCDC141Q6ZP82 1450 aa22.34■■□□□ 1.17
SCAP-213ENST00000494938 AGLP35573 1532 aa22.34■■□□□ 1.17
SCAP-213ENST00000494938 ATP7AQ04656 1500 aa22.34■■□□□ 1.17
SCAP-213ENST00000494938 MADDQ8WXG6 1647 aa22.32■■□□□ 1.16
SCAP-213ENST00000494938 INO80Q9ULG1 1556 aaPredicted RBP22.31■■□□□ 1.16
SCAP-213ENST00000494938 A2MP01023 1474 aa22.31■■□□□ 1.16
SCAP-213ENST00000494938 DHX29Q7Z478 1369 aaKnown RBP22.3■■□□□ 1.16
SCAP-213ENST00000494938 FGD6Q6ZV73 1430 aa22.3■■□□□ 1.16
SCAP-213ENST00000494938 PPARGC1BQ86YN6 1023 aaKnown RBP22.29■■□□□ 1.16
SCAP-213ENST00000494938 ARHGEF5Q12774 1597 aa22.29■■□□□ 1.16
SCAP-213ENST00000494938 CEBPAP49715 358 aaPredicted RBP22.27■■□□□ 1.16
SCAP-213ENST00000494938 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
SCAP-213ENST00000494938 ABCC5O15440 1437 aa22.25■■□□□ 1.15
SCAP-213ENST00000494938 TCOF1Q13428 1488 aaKnown RBP22.24■■□□□ 1.15
SCAP-213ENST00000494938 GGT6Q6P531 493 aa22.24■■□□□ 1.15
SCAP-213ENST00000494938 PLXNC1O60486 1568 aa22.22■■□□□ 1.15
SCAP-213ENST00000494938 ESF1Q9H501 851 aaKnown RBP22.22■■□□□ 1.15
SCAP-213ENST00000494938 PTPN23Q9H3S7 1636 aa22.21■■□□□ 1.15
SCAP-213ENST00000494938 RIMS1Q86UR5 1692 aaKnown RBP22.21■■□□□ 1.15
SCAP-213ENST00000494938 KIF3BO15066 747 aa22.21■■□□□ 1.15
SCAP-213ENST00000494938 PPP6R1Q9UPN7 881 aa22.2■■□□□ 1.14
SCAP-213ENST00000494938 FAM50AQ14320 339 aaKnown RBP22.19■■□□□ 1.14
SCAP-213ENST00000494938 DAPK1P53355 1430 aa22.17■■□□□ 1.14
SCAP-213ENST00000494938 MAST1Q9Y2H9 1570 aa22.16■■□□□ 1.14
SCAP-213ENST00000494938 RRP7BPQ9NSQ0 103 aa22.16■■□□□ 1.14
SCAP-213ENST00000494938 CHIC2Q9UKJ5 165 aa22.16■■□□□ 1.14
SCAP-213ENST00000494938 ZMYM3Q14202 1370 aa22.15■■□□□ 1.14
SCAP-213ENST00000494938 CNTLNQ9NXG0 1405 aa22.14■■□□□ 1.14
SCAP-213ENST00000494938 FER1L4A9Z1Z3 1794 aa22.14■■□□□ 1.13
SCAP-213ENST00000494938 ADGBQ8N7X0 1667 aa22.14■■□□□ 1.13
SCAP-213ENST00000494938 SHANK2Q9UPX8 1470 aa22.12■■□□□ 1.13
SCAP-213ENST00000494938 KIF15Q9NS87 1388 aa22.1■■□□□ 1.13
SCAP-213ENST00000494938 LMTK3Q96Q04 1460 aa22.09■■□□□ 1.13
SCAP-213ENST00000494938 NCOA1Q15788 1441 aa22.08■■□□□ 1.13
SCAP-213ENST00000494938 DNMT1P26358 1616 aaKnown RBP22.07■■□□□ 1.12
SCAP-213ENST00000494938 HSPA2P54652 639 aa22.07■■□□□ 1.12
SCAP-213ENST00000494938 ANKRD30AQ9BXX3 1397 aa22.07■■□□□ 1.12
SCAP-213ENST00000494938 WASHC2CQ9Y4E1 1318 aa22.06■■□□□ 1.12
SCAP-213ENST00000494938 PTPRKQ15262 1439 aa22.06■■□□□ 1.12
SCAP-213ENST00000494938 DUOX2Q9NRD8 1548 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms