RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 KDM5BQ9UGL1 1544 aa8.43□□□□□ -1.06
RUNX1-217ENST00000494829 GCC2Q8IWJ2 1684 aa8.43□□□□□ -1.06
RUNX1-217ENST00000494829 ATP10BO94823 1461 aa8.42□□□□□ -1.06
RUNX1-217ENST00000494829 ABCC5O15440 1437 aa8.42□□□□□ -1.06
RUNX1-217ENST00000494829 SCAF1Q9H7N4 1312 aaKnown RBP8.42□□□□□ -1.06
RUNX1-217ENST00000494829 GPATCH8Q9UKJ3 1502 aaKnown RBP8.41□□□□□ -1.06
RUNX1-217ENST00000494829 HIRIP3Q9BW71 556 aaPredicted RBP8.41□□□□□ -1.06
RUNX1-217ENST00000494829 ADCY10Q96PN6 1610 aa8.4□□□□□ -1.06
RUNX1-217ENST00000494829 DAPK1P53355 1430 aa8.4□□□□□ -1.06
RUNX1-217ENST00000494829 CDC42BPAQ5VT25 1732 aa8.4□□□□□ -1.06
RUNX1-217ENST00000494829 DNMT1P26358 1616 aaKnown RBP8.4□□□□□ -1.06
RUNX1-217ENST00000494829 TROQ12816 1431 aaPredicted RBP8.4□□□□□ -1.06
RUNX1-217ENST00000494829 UACAQ9BZF9 1416 aa8.4□□□□□ -1.06
RUNX1-217ENST00000494829 MIA2Q96PC5 1412 aa8.4□□□□□ -1.07
RUNX1-217ENST00000494829 SHROOM2Q13796 1616 aa8.39□□□□□ -1.07
RUNX1-217ENST00000494829 CAMSAP2Q08AD1 1489 aa8.39□□□□□ -1.07
RUNX1-217ENST00000494829 ABCC10Q5T3U5 1492 aa8.38□□□□□ -1.07
RUNX1-217ENST00000494829 CARMIL2Q6F5E8 1435 aa8.37□□□□□ -1.07
RUNX1-217ENST00000494829 CROCC2H7BZ55 1655 aa8.36□□□□□ -1.07
RUNX1-217ENST00000494829 YTHDC1Q96MU7 727 aaKnown RBP8.36□□□□□ -1.07
RUNX1-217ENST00000494829 PPP1R15AO75807 674 aaPredicted RBP8.35□□□□□ -1.07
RUNX1-217ENST00000494829 ZNF777Q9ULD5 760 aaPredicted RBP8.35□□□□□ -1.07
RUNX1-217ENST00000494829 KCNH8Q96L42 1107 aa8.35□□□□□ -1.07
RUNX1-217ENST00000494829 PTPRGP23470 1445 aa8.35□□□□□ -1.07
RUNX1-217ENST00000494829 CDC42BPBQ9Y5S2 1711 aa8.35□□□□□ -1.07
RUNX1-217ENST00000494829 AKNAQ7Z591 1439 aa8.34□□□□□ -1.07
RUNX1-217ENST00000494829 CLASP1Q7Z460 1538 aa8.34□□□□□ -1.07
RUNX1-217ENST00000494829 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.07
RUNX1-217ENST00000494829 TTC37Q6PGP7 1564 aa8.33□□□□□ -1.08
RUNX1-217ENST00000494829 CFDP1Q9UEE9 299 aaPredicted RBP8.33□□□□□ -1.08
RUNX1-217ENST00000494829 MPHOSPH9Q99550 1183 aa8.33□□□□□ -1.08
RUNX1-217ENST00000494829 PZPP20742 1482 aa8.32□□□□□ -1.08
RUNX1-217ENST00000494829 ACIN1Q9UKV3 1341 aaKnown RBP8.32□□□□□ -1.08
RUNX1-217ENST00000494829 NCOA1Q15788 1441 aa8.32□□□□□ -1.08
RUNX1-217ENST00000494829 SAMD9LQ8IVG5 1584 aa8.32□□□□□ -1.08
RUNX1-217ENST00000494829 TRIM52Q96A61 297 aa8.32□□□□□ -1.08
RUNX1-217ENST00000494829 ROCK1Q13464 1354 aa8.31□□□□□ -1.08
RUNX1-217ENST00000494829 ADGBQ8N7X0 1667 aa8.31□□□□□ -1.08
RUNX1-217ENST00000494829 MSH5O43196 834 aa8.3□□□□□ -1.08
RUNX1-217ENST00000494829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.3□□□□□ -1.08
RUNX1-217ENST00000494829 HNRNPMP52272 730 aaKnown RBP eCLIP8.3□□□□□ -1.08
RUNX1-217ENST00000494829 MBD5Q9P267 1494 aa8.3□□□□□ -1.08
RUNX1-217ENST00000494829 CDK11AQ9UQ88 783 aaPredicted RBP8.3□□□□□ -1.08
RUNX1-217ENST00000494829 PLEKHD1A6NEE1 506 aa8.29□□□□□ -1.08
RUNX1-217ENST00000494829 PREX2Q70Z35 1606 aa8.29□□□□□ -1.08
RUNX1-217ENST00000494829 ANKRD30BQ9BXX2 1392 aa8.29□□□□□ -1.08
RUNX1-217ENST00000494829 ADGRL2O95490 1459 aa8.28□□□□□ -1.08
RUNX1-217ENST00000494829 ZCCHC11Q5TAX3 1644 aaKnown RBP8.28□□□□□ -1.08
RUNX1-217ENST00000494829 ABCC2Q92887 1545 aa8.28□□□□□ -1.08
RUNX1-217ENST00000494829 RNF216Q9NWF9 866 aaPredicted RBP8.28□□□□□ -1.08
RUNX1-217ENST00000494829 ARHGEF12Q9NZN5 1544 aa8.28□□□□□ -1.08
RUNX1-217ENST00000494829 TONSLQ96HA7 1378 aa8.28□□□□□ -1.08
RUNX1-217ENST00000494829 DDX10Q13206 875 aaKnown RBP8.28□□□□□ -1.08
RUNX1-217ENST00000494829 TEX14Q8IWB6 1497 aa8.27□□□□□ -1.09
RUNX1-217ENST00000494829 NBPF8Q3BBV2 869 aa8.27□□□□□ -1.09
RUNX1-217ENST00000494829 L3MBTL2Q969R5 705 aa8.27□□□□□ -1.09
RUNX1-217ENST00000494829 C9orf84Q5VXU9 1444 aa8.26□□□□□ -1.09
RUNX1-217ENST00000494829 SYCP2Q9BX26 1530 aa8.26□□□□□ -1.09
RUNX1-217ENST00000494829 C11orf95C9JLR9 678 aaPredicted RBP8.25□□□□□ -1.09
RUNX1-217ENST00000494829 RPRD2Q5VT52 1461 aaKnown RBP8.25□□□□□ -1.09
RUNX1-217ENST00000494829 TIMELESSQ9UNS1 1208 aa8.24□□□□□ -1.09
RUNX1-217ENST00000494829 GTF3C3Q9Y5Q9 886 aa8.24□□□□□ -1.09
RUNX1-217ENST00000494829 ANKRD50Q9ULJ7 1429 aa8.24□□□□□ -1.09
RUNX1-217ENST00000494829 ARHGEF5Q12774 1597 aa8.23□□□□□ -1.09
RUNX1-217ENST00000494829 SHANK2Q9UPX8 1470 aa8.23□□□□□ -1.09
RUNX1-217ENST00000494829 MYO5CQ9NQX4 1742 aa8.23□□□□□ -1.09
RUNX1-217ENST00000494829 ARHGAP5Q13017 1502 aa8.22□□□□□ -1.09
RUNX1-217ENST00000494829 PKD2Q13563 968 aa8.21□□□□□ -1.09
RUNX1-217ENST00000494829 ANKRD30AQ9BXX3 1397 aa8.21□□□□□ -1.09
RUNX1-217ENST00000494829 KIF15Q9NS87 1388 aa8.21□□□□□ -1.09
RUNX1-217ENST00000494829 HSPA5P11021 654 aaKnown RBP8.21□□□□□ -1.1
RUNX1-217ENST00000494829 HOXD11P31277 338 aaPredicted RBP8.21□□□□□ -1.1
RUNX1-217ENST00000494829 WASHC2AQ641Q2 1341 aa8.21□□□□□ -1.1
RUNX1-217ENST00000494829 CCDC141Q6ZP82 1450 aa8.2□□□□□ -1.1
RUNX1-217ENST00000494829 FOXD4L1Q9NU39 408 aa8.2□□□□□ -1.1
RUNX1-217ENST00000494829 KIAA1107Q9UPP5 1409 aa8.2□□□□□ -1.1
RUNX1-217ENST00000494829 UHRF1BP1LA0JNW5 1464 aa8.2□□□□□ -1.1
RUNX1-217ENST00000494829 TRAPPC8Q9Y2L5 1435 aa8.19□□□□□ -1.1
RUNX1-217ENST00000494829 NUP155O75694 1391 aa8.19□□□□□ -1.1
RUNX1-217ENST00000494829 KDM5DQ9BY66 1539 aa8.19□□□□□ -1.1
RUNX1-217ENST00000494829 BCORL1Q5H9F3 1711 aa8.18□□□□□ -1.1
RUNX1-217ENST00000494829 PLA2R1Q13018 1463 aa8.18□□□□□ -1.1
RUNX1-217ENST00000494829 PLEKHH2Q8IVE3 1493 aa8.18□□□□□ -1.1
RUNX1-217ENST00000494829 SPATA31E1Q6ZUB1 1445 aa8.18□□□□□ -1.1
RUNX1-217ENST00000494829 ABCC1P33527 1531 aa8.17□□□□□ -1.1
RUNX1-217ENST00000494829 FAM135AQ9P2D6 1515 aa8.17□□□□□ -1.1
RUNX1-217ENST00000494829 MAST1Q9Y2H9 1570 aa8.17□□□□□ -1.1
RUNX1-217ENST00000494829 PLCH2O75038 1416 aa8.17□□□□□ -1.1
RUNX1-217ENST00000494829 CENPBP07199 599 aaPredicted RBP8.16□□□□□ -1.1
RUNX1-217ENST00000494829 TSPY4P0CV99 314 aa8.16□□□□□ -1.1
RUNX1-217ENST00000494829 TSPY10P0CW01 314 aa8.16□□□□□ -1.1
RUNX1-217ENST00000494829 AFAP1Q8N556 730 aa8.16□□□□□ -1.1
RUNX1-217ENST00000494829 UNC13BO14795 1591 aa8.15□□□□□ -1.1
RUNX1-217ENST00000494829 CCDC184Q52MB2 194 aa8.15□□□□□ -1.1
RUNX1-217ENST00000494829 PLXNC1O60486 1568 aa8.15□□□□□ -1.1
RUNX1-217ENST00000494829 WDR7Q9Y4E6 1490 aa8.14□□□□□ -1.11
RUNX1-217ENST00000494829 ABCA9Q8IUA7 1624 aa8.13□□□□□ -1.11
RUNX1-217ENST00000494829 ZNF326Q5BKZ1 582 aaKnown RBP8.13□□□□□ -1.11
RUNX1-217ENST00000494829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.13□□□□□ -1.11
RUNX1-217ENST00000494829 KDM5CP41229 1560 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms