RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SPNS2Q8IVW8 549 aa10.28□□□□□ -0.76
CPSF7-213ENST00000494016 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-213ENST00000494016 FBXO22Q8NEZ5 403 aa10.27□□□□□ -0.77
CPSF7-213ENST00000494016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.77
CPSF7-213ENST00000494016 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
CPSF7-213ENST00000494016 CECR2Q9BXF3 1484 aa10.27□□□□□ -0.77
CPSF7-213ENST00000494016 NLRP6P59044 892 aa10.26□□□□□ -0.77
CPSF7-213ENST00000494016 GTPBP6O43824 516 aaPredicted RBP10.24□□□□□ -0.77
CPSF7-213ENST00000494016 OCEL1Q9H607 264 aa10.24□□□□□ -0.77
CPSF7-213ENST00000494016 RYDENQ9NUL5 291 aaKnown RBP10.24□□□□□ -0.77
CPSF7-213ENST00000494016 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
CPSF7-213ENST00000494016 MS4A4AQ96JQ5 239 aa10.23□□□□□ -0.77
CPSF7-213ENST00000494016 RSF1Q96T23 1441 aaPredicted RBP10.23□□□□□ -0.77
CPSF7-213ENST00000494016 SPRYD3Q8NCJ5 442 aa10.22□□□□□ -0.77
CPSF7-213ENST00000494016 PLCG2P16885 1265 aa10.21□□□□□ -0.77
CPSF7-213ENST00000494016 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
CPSF7-213ENST00000494016 PLCB2Q00722 1185 aa10.17□□□□□ -0.78
CPSF7-213ENST00000494016 DPY19L2Q6NUT2 758 aa10.17□□□□□ -0.78
CPSF7-213ENST00000494016 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
CPSF7-213ENST00000494016 TMEM121BQ9BXQ6 578 aaPredicted RBP10.16□□□□□ -0.78
CPSF7-213ENST00000494016 PPP1R37O75864 691 aa10.15□□□□□ -0.78
CPSF7-213ENST00000494016 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-213ENST00000494016 MROH2BQ7Z745 1585 aa10.11□□□□□ -0.79
CPSF7-213ENST00000494016 SNPHO15079 494 aa10.11□□□□□ -0.79
CPSF7-213ENST00000494016 MARVELD3Q96A59 401 aa10.1□□□□□ -0.79
CPSF7-213ENST00000494016 BOLA1Q9Y3E2 137 aa10.09□□□□□ -0.79
CPSF7-213ENST00000494016 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.08□□□□□ -0.8
CPSF7-213ENST00000494016 SMARCA4P51532 1647 aa10.07□□□□□ -0.8
CPSF7-213ENST00000494016 MICALL2Q8IY33 904 aa10.07□□□□□ -0.8
CPSF7-213ENST00000494016 G3V3G9 751 aa10.05□□□□□ -0.8
CPSF7-213ENST00000494016 WIZO95785 1651 aa10.04□□□□□ -0.8
CPSF7-213ENST00000494016 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-213ENST00000494016 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
CPSF7-213ENST00000494016 ATAD2BQ9ULI0 1458 aa10.01□□□□□ -0.81
CPSF7-213ENST00000494016 NCAPD3P42695 1498 aa9.99□□□□□ -0.81
CPSF7-213ENST00000494016 HMGXB3Q12766 1538 aa9.99□□□□□ -0.81
CPSF7-213ENST00000494016 HAP1P54257 671 aaPredicted RBP9.99□□□□□ -0.81
CPSF7-213ENST00000494016 SMARCA2P51531 1590 aa9.98□□□□□ -0.81
CPSF7-213ENST00000494016 EMP3P54852 163 aa9.98□□□□□ -0.81
CPSF7-213ENST00000494016 C3orf67Q6ZVT6 689 aa9.98□□□□□ -0.81
CPSF7-213ENST00000494016 CADPS2Q86UW7 1296 aa9.98□□□□□ -0.81
CPSF7-213ENST00000494016 PEG3Q9GZU2 1588 aa9.96□□□□□ -0.82
CPSF7-213ENST00000494016 TMEM92Q6UXU6 159 aa9.94□□□□□ -0.82
CPSF7-213ENST00000494016 CRISPLD2Q9H0B8 497 aa9.93□□□□□ -0.82
CPSF7-213ENST00000494016 BAZ1BQ9UIG0 1483 aaKnown RBP9.92□□□□□ -0.82
CPSF7-213ENST00000494016 NCKAP5LQ9HCH0 1330 aa9.92□□□□□ -0.82
CPSF7-213ENST00000494016 KRTAP3-3Q9BYR6 98 aa9.92□□□□□ -0.82
CPSF7-213ENST00000494016 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
CPSF7-213ENST00000494016 FAM205CA6NFA0 338 aa9.91□□□□□ -0.82
CPSF7-213ENST00000494016 KIF3CO14782 793 aa9.91□□□□□ -0.82
CPSF7-213ENST00000494016 PDE4AP27815 886 aa9.91□□□□□ -0.82
CPSF7-213ENST00000494016 HS3ST6Q96QI5 342 aa9.91□□□□□ -0.82
CPSF7-213ENST00000494016 GPHNQ9NQX3 736 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-213ENST00000494016 TOP2AP11388 1531 aaKnown RBP9.89□□□□□ -0.83
CPSF7-213ENST00000494016 C2orf72A6NCS6 295 aa9.89□□□□□ -0.83
CPSF7-213ENST00000494016 TMC2Q8TDI7 906 aa9.89□□□□□ -0.83
CPSF7-213ENST00000494016 NESP48681 1621 aa9.89□□□□□ -0.83
CPSF7-213ENST00000494016 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
CPSF7-213ENST00000494016 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
CPSF7-213ENST00000494016 MFSD10Q14728 455 aa9.87□□□□□ -0.83
CPSF7-213ENST00000494016 VSIG10Q8N0Z9 540 aa9.87□□□□□ -0.83
CPSF7-213ENST00000494016 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
CPSF7-213ENST00000494016 LOC105371045A0A1W2PR82 267 aa9.86□□□□□ -0.83
CPSF7-213ENST00000494016 CCDC88BA6NC98 1476 aa9.85□□□□□ -0.83
CPSF7-213ENST00000494016 CUX2O14529 1486 aa9.85□□□□□ -0.83
CPSF7-213ENST00000494016 FOXK1P85037 733 aa9.85□□□□□ -0.83
CPSF7-213ENST00000494016 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
CPSF7-213ENST00000494016 ERCC6Q03468 1493 aa9.84□□□□□ -0.83
CPSF7-213ENST00000494016 DSG2Q14126 1118 aa9.83□□□□□ -0.84
CPSF7-213ENST00000494016 DDX27Q96GQ7 796 aaKnown RBP9.83□□□□□ -0.84
CPSF7-213ENST00000494016 PPP1R15BQ5SWA1 713 aa9.82□□□□□ -0.84
CPSF7-213ENST00000494016 THOC2Q8NI27 1593 aaKnown RBP9.82□□□□□ -0.84
CPSF7-213ENST00000494016 KIF21AQ7Z4S6 1674 aa9.81□□□□□ -0.84
CPSF7-213ENST00000494016 PLPP6Q8IY26 295 aa9.8□□□□□ -0.84
CPSF7-213ENST00000494016 WDR70Q9NW82 654 aa9.8□□□□□ -0.84
CPSF7-213ENST00000494016 LAMC3Q9Y6N6 1575 aa9.8□□□□□ -0.84
CPSF7-213ENST00000494016 RNF166Q96A37 237 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-213ENST00000494016 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
CPSF7-213ENST00000494016 HOXB3P14651 431 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-213ENST00000494016 E2F4Q16254 413 aa9.74□□□□□ -0.85
CPSF7-213ENST00000494016 SLC34A2O95436 690 aa9.73□□□□□ -0.85
CPSF7-213ENST00000494016 ZNF710Q8N1W2 664 aa9.73□□□□□ -0.85
CPSF7-213ENST00000494016 DOK7Q18PE1 504 aa9.72□□□□□ -0.85
CPSF7-213ENST00000494016 FAM9AQ8IZU1 332 aaPredicted RBP9.71□□□□□ -0.86
CPSF7-213ENST00000494016 ERBB3P21860 1342 aa9.71□□□□□ -0.86
CPSF7-213ENST00000494016 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
CPSF7-213ENST00000494016 ABCC8Q09428 1581 aa9.69□□□□□ -0.86
CPSF7-213ENST00000494016 OXER1Q8TDS5 423 aa9.69□□□□□ -0.86
CPSF7-213ENST00000494016 PTCD2Q8WV60 388 aaKnown RBP9.69□□□□□ -0.86
CPSF7-213ENST00000494016 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-213ENST00000494016 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
CPSF7-213ENST00000494016 KCNV2Q8TDN2 545 aa9.68□□□□□ -0.86
CPSF7-213ENST00000494016 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-213ENST00000494016 CADPSQ9ULU8 1353 aa9.67□□□□□ -0.86
CPSF7-213ENST00000494016 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
CPSF7-213ENST00000494016 PDS5BQ9NTI5 1447 aa9.66□□□□□ -0.86
CPSF7-213ENST00000494016 RIMBP2O15034 1052 aa9.66□□□□□ -0.86
CPSF7-213ENST00000494016 MYT1LQ9UL68 1186 aa9.66□□□□□ -0.86
CPSF7-213ENST00000494016 WDR62O43379 1518 aa9.66□□□□□ -0.86
CPSF7-213ENST00000494016 UPF1Q92900 1129 aaKnown RBP eCLIP9.65□□□□□ -0.863e-8■■□□□ 12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms