RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 TEX14Q8IWB6 1497 aa18.69■□□□□ 0.58
UBA3-211ENST00000493957 COL17A1Q9UMD9 1497 aaPredicted RBP18.67■□□□□ 0.58
UBA3-211ENST00000493957 MYO5CQ9NQX4 1742 aa18.67■□□□□ 0.58
UBA3-211ENST00000493957 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
UBA3-211ENST00000493957 VPS8Q8N3P4 1428 aa18.65■□□□□ 0.58
UBA3-211ENST00000493957 POTEHQ6S545 545 aa18.64■□□□□ 0.57
UBA3-211ENST00000493957 CDC42BPAQ5VT25 1732 aa18.61■□□□□ 0.57
UBA3-211ENST00000493957 CDC42BPBQ9Y5S2 1711 aa18.61■□□□□ 0.57
UBA3-211ENST00000493957 CDK11AQ9UQ88 783 aaPredicted RBP18.6■□□□□ 0.57
UBA3-211ENST00000493957 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
UBA3-211ENST00000493957 PREX2Q70Z35 1606 aa18.57■□□□□ 0.56
UBA3-211ENST00000493957 CFAP74Q9C0B2 1584 aa18.57■□□□□ 0.56
UBA3-211ENST00000493957 FANCAO15360 1455 aa18.56■□□□□ 0.56
UBA3-211ENST00000493957 NEO1Q92859 1461 aa18.56■□□□□ 0.56
UBA3-211ENST00000493957 FRMPD1Q5SYB0 1578 aa18.55■□□□□ 0.56
UBA3-211ENST00000493957 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
UBA3-211ENST00000493957 ARAP3Q8WWN8 1544 aa18.54■□□□□ 0.56
UBA3-211ENST00000493957 PLCH2O75038 1416 aa18.54■□□□□ 0.56
UBA3-211ENST00000493957 RICTORQ6R327 1708 aa18.54■□□□□ 0.56
UBA3-211ENST00000493957 MTUS2Q5JR59 1369 aa18.52■□□□□ 0.55
UBA3-211ENST00000493957 ARHGAP5Q13017 1502 aa18.51■□□□□ 0.55
UBA3-211ENST00000493957 AKNAQ7Z591 1439 aa18.5■□□□□ 0.55
UBA3-211ENST00000493957 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
UBA3-211ENST00000493957 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
UBA3-211ENST00000493957 ADGRL1O94910 1474 aa18.46■□□□□ 0.55
UBA3-211ENST00000493957 PHLDB1Q86UU1 1377 aa18.46■□□□□ 0.55
UBA3-211ENST00000493957 MAP3K1Q13233 1512 aa18.46■□□□□ 0.55
UBA3-211ENST00000493957 GPATCH8Q9UKJ3 1502 aaKnown RBP18.46■□□□□ 0.55
UBA3-211ENST00000493957 ITSN2Q9NZM3 1697 aa18.46■□□□□ 0.55
UBA3-211ENST00000493957 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.54
UBA3-211ENST00000493957 RAPGEF3O95398 923 aa18.45■□□□□ 0.54
UBA3-211ENST00000493957 SAMD9LQ8IVG5 1584 aa18.44■□□□□ 0.54
UBA3-211ENST00000493957 KANK4Q5T7N3 995 aaPredicted RBP18.44■□□□□ 0.54
UBA3-211ENST00000493957 DENND4BO75064 1496 aaPredicted RBP18.44■□□□□ 0.54
UBA3-211ENST00000493957 NCOA2Q15596 1464 aa18.42■□□□□ 0.54
UBA3-211ENST00000493957 ABCC1P33527 1531 aa18.42■□□□□ 0.54
UBA3-211ENST00000493957 SCAPERQ9BY12 1400 aa18.41■□□□□ 0.54
UBA3-211ENST00000493957 EFCAB2Q5VUJ9 269 aa18.41■□□□□ 0.54
UBA3-211ENST00000493957 ARHGEF12Q9NZN5 1544 aa18.4■□□□□ 0.54
UBA3-211ENST00000493957 CCNB3Q8WWL7 1395 aa18.4■□□□□ 0.54
UBA3-211ENST00000493957 POGZQ7Z3K3 1410 aa18.4■□□□□ 0.54
UBA3-211ENST00000493957 ZMYM4Q5VZL5 1548 aa18.39■□□□□ 0.54
UBA3-211ENST00000493957 ARHGEF40Q8TER5 1519 aa18.37■□□□□ 0.53
UBA3-211ENST00000493957 SYCP2Q9BX26 1530 aa18.37■□□□□ 0.53
UBA3-211ENST00000493957 SIGLEC1Q9BZZ2 1709 aa18.37■□□□□ 0.53
UBA3-211ENST00000493957 KDM5CP41229 1560 aa18.35■□□□□ 0.53
UBA3-211ENST00000493957 ZNF777Q9ULD5 760 aaPredicted RBP18.35■□□□□ 0.53
UBA3-211ENST00000493957 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
UBA3-211ENST00000493957 YEATS2Q9ULM3 1422 aa18.33■□□□□ 0.53
UBA3-211ENST00000493957 ZFYVE16Q7Z3T8 1539 aa18.33■□□□□ 0.52
UBA3-211ENST00000493957 ZNF644Q9H582 1327 aaPredicted RBP18.32■□□□□ 0.52
UBA3-211ENST00000493957 CFDP1Q9UEE9 299 aaPredicted RBP18.32■□□□□ 0.52
UBA3-211ENST00000493957 HECW2Q9P2P5 1572 aa18.32■□□□□ 0.52
UBA3-211ENST00000493957 ZNF518AQ6AHZ1 1483 aa18.32■□□□□ 0.52
UBA3-211ENST00000493957 APLP2Q06481 763 aa18.31■□□□□ 0.52
UBA3-211ENST00000493957 KIDINS220Q9ULH0 1771 aa18.3■□□□□ 0.52
UBA3-211ENST00000493957 AFAP1Q8N556 730 aa18.3■□□□□ 0.52
UBA3-211ENST00000493957 ABCA6Q8N139 1617 aa18.3■□□□□ 0.52
UBA3-211ENST00000493957 CAMSAP2Q08AD1 1489 aa18.29■□□□□ 0.52
UBA3-211ENST00000493957 DSG3P32926 999 aa18.29■□□□□ 0.52
UBA3-211ENST00000493957 DIP2CQ9Y2E4 1556 aa18.27■□□□□ 0.52
UBA3-211ENST00000493957 HNRNPMP52272 730 aaKnown RBP eCLIP18.27■□□□□ 0.52
UBA3-211ENST00000493957 PLEKHH2Q8IVE3 1493 aa18.26■□□□□ 0.51
UBA3-211ENST00000493957 KDM4FA0A1W2PPD8 638 aa18.26■□□□□ 0.51
UBA3-211ENST00000493957 NPM3O75607 178 aaKnown RBP18.26■□□□□ 0.51
UBA3-211ENST00000493957 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
UBA3-211ENST00000493957 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
UBA3-211ENST00000493957 MYOM3Q5VTT5 1437 aa18.25■□□□□ 0.51
UBA3-211ENST00000493957 KIAA1107Q9UPP5 1409 aa18.25■□□□□ 0.51
UBA3-211ENST00000493957 MBD5Q9P267 1494 aa18.25■□□□□ 0.51
UBA3-211ENST00000493957 INO80Q9ULG1 1556 aaPredicted RBP18.25■□□□□ 0.51
UBA3-211ENST00000493957 BCORL1Q5H9F3 1711 aa18.23■□□□□ 0.51
UBA3-211ENST00000493957 MLH3Q9UHC1 1453 aa18.23■□□□□ 0.51
UBA3-211ENST00000493957 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
UBA3-211ENST00000493957 PTPN23Q9H3S7 1636 aa18.22■□□□□ 0.51
UBA3-211ENST00000493957 CAPN15O75808 1086 aa18.21■□□□□ 0.51
UBA3-211ENST00000493957 ATP7AQ04656 1500 aa18.21■□□□□ 0.51
UBA3-211ENST00000493957 ADAMTSL3P82987 1691 aa18.21■□□□□ 0.51
UBA3-211ENST00000493957 PPARGC1BQ86YN6 1023 aaKnown RBP18.2■□□□□ 0.5
UBA3-211ENST00000493957 ARHGEF5Q12774 1597 aa18.2■□□□□ 0.5
UBA3-211ENST00000493957 ATP10AO60312 1499 aa18.2■□□□□ 0.5
UBA3-211ENST00000493957 ADGBQ8N7X0 1667 aa18.19■□□□□ 0.5
UBA3-211ENST00000493957 C9orf84Q5VXU9 1444 aa18.18■□□□□ 0.5
UBA3-211ENST00000493957 MIA2Q96PC5 1412 aa18.18■□□□□ 0.5
UBA3-211ENST00000493957 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
UBA3-211ENST00000493957 CROCC2H7BZ55 1655 aa18.18■□□□□ 0.5
UBA3-211ENST00000493957 MADDQ8WXG6 1647 aa18.17■□□□□ 0.5
UBA3-211ENST00000493957 CCDC141Q6ZP82 1450 aa18.17■□□□□ 0.5
UBA3-211ENST00000493957 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
UBA3-211ENST00000493957 FGD6Q6ZV73 1430 aa18.16■□□□□ 0.5
UBA3-211ENST00000493957 SPAG9O60271 1321 aaKnown RBP18.16■□□□□ 0.5
UBA3-211ENST00000493957 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
UBA3-211ENST00000493957 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
UBA3-211ENST00000493957 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.5
UBA3-211ENST00000493957 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.49
UBA3-211ENST00000493957 DNMT1P26358 1616 aaKnown RBP18.12■□□□□ 0.49
UBA3-211ENST00000493957 PLXNC1O60486 1568 aa18.11■□□□□ 0.49
UBA3-211ENST00000493957 MAST1Q9Y2H9 1570 aa18.11■□□□□ 0.49
UBA3-211ENST00000493957 MLECQ14165 292 aa18.09■□□□□ 0.49
UBA3-211ENST00000493957 AGLP35573 1532 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms