RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 ZNF777Q9ULD5 760 aaPredicted RBP24.92■■□□□ 1.58
PSMB4-205ENST00000493673 ADGRL1O94910 1474 aa24.92■■□□□ 1.58
PSMB4-205ENST00000493673 MYO5CQ9NQX4 1742 aa24.91■■□□□ 1.58
PSMB4-205ENST00000493673 EHBP1L1Q8N3D4 1523 aa24.88■■□□□ 1.57
PSMB4-205ENST00000493673 GPATCH8Q9UKJ3 1502 aaKnown RBP24.86■■□□□ 1.57
PSMB4-205ENST00000493673 MYT1LQ9UL68 1186 aa24.85■■□□□ 1.57
PSMB4-205ENST00000493673 MAP3K1Q13233 1512 aa24.85■■□□□ 1.57
PSMB4-205ENST00000493673 TIAM1Q13009 1591 aa24.85■■□□□ 1.57
PSMB4-205ENST00000493673 KANK4Q5T7N3 995 aaPredicted RBP24.83■■□□□ 1.57
PSMB4-205ENST00000493673 AFAP1Q8N556 730 aa24.83■■□□□ 1.57
PSMB4-205ENST00000493673 LRRC9Q6ZRR7 1453 aa24.82■■□□□ 1.56
PSMB4-205ENST00000493673 POGZQ7Z3K3 1410 aa24.8■■□□□ 1.56
PSMB4-205ENST00000493673 PREX2Q70Z35 1606 aa24.79■■□□□ 1.56
PSMB4-205ENST00000493673 ARID4BQ4LE39 1312 aaPredicted RBP24.79■■□□□ 1.56
PSMB4-205ENST00000493673 MAGI2Q86UL8 1455 aa24.79■■□□□ 1.56
PSMB4-205ENST00000493673 KDM4FA0A1W2PPD8 638 aa24.78■■□□□ 1.56
PSMB4-205ENST00000493673 CDC42BPBQ9Y5S2 1711 aa24.78■■□□□ 1.56
PSMB4-205ENST00000493673 HNRNPMP52272 730 aaKnown RBP eCLIP24.78■■□□□ 1.56
PSMB4-205ENST00000493673 NCOA2Q15596 1464 aa24.77■■□□□ 1.56
PSMB4-205ENST00000493673 ZNF518AQ6AHZ1 1483 aa24.77■■□□□ 1.56
PSMB4-205ENST00000493673 FRMPD1Q5SYB0 1578 aa24.75■■□□□ 1.55
PSMB4-205ENST00000493673 PLEKHH2Q8IVE3 1493 aa24.75■■□□□ 1.55
PSMB4-205ENST00000493673 CDC42BPAQ5VT25 1732 aa24.74■■□□□ 1.55
PSMB4-205ENST00000493673 RICTORQ6R327 1708 aa24.73■■□□□ 1.55
PSMB4-205ENST00000493673 SUPT6HQ7KZ85 1726 aaKnown RBP24.73■■□□□ 1.55
PSMB4-205ENST00000493673 KIAA1107Q9UPP5 1409 aa24.72■■□□□ 1.55
PSMB4-205ENST00000493673 ZMYM4Q5VZL5 1548 aa24.71■■□□□ 1.55
PSMB4-205ENST00000493673 TRAPPC8Q9Y2L5 1435 aa24.71■■□□□ 1.55
PSMB4-205ENST00000493673 ZNF644Q9H582 1327 aaPredicted RBP24.71■■□□□ 1.55
PSMB4-205ENST00000493673 RSPH4AQ5TD94 716 aa24.69■■□□□ 1.54
PSMB4-205ENST00000493673 ABCC1P33527 1531 aa24.69■■□□□ 1.54
PSMB4-205ENST00000493673 ZFYVE16Q7Z3T8 1539 aa24.69■■□□□ 1.54
PSMB4-205ENST00000493673 ARHGEF12Q9NZN5 1544 aa24.69■■□□□ 1.54
PSMB4-205ENST00000493673 SPAG9O60271 1321 aaKnown RBP24.68■■□□□ 1.54
PSMB4-205ENST00000493673 YEATS2Q9ULM3 1422 aa24.68■■□□□ 1.54
PSMB4-205ENST00000493673 ATP10AO60312 1499 aa24.65■■□□□ 1.54
PSMB4-205ENST00000493673 SAMD9LQ8IVG5 1584 aa24.65■■□□□ 1.54
PSMB4-205ENST00000493673 ITSN2Q9NZM3 1697 aa24.64■■□□□ 1.54
PSMB4-205ENST00000493673 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.54
PSMB4-205ENST00000493673 ARHGEF40Q8TER5 1519 aa24.63■■□□□ 1.53
PSMB4-205ENST00000493673 KDM5CP41229 1560 aa24.62■■□□□ 1.53
PSMB4-205ENST00000493673 SYCP2Q9BX26 1530 aa24.62■■□□□ 1.53
PSMB4-205ENST00000493673 TSPY4P0CV99 314 aa24.6■■□□□ 1.53
PSMB4-205ENST00000493673 TSPY10P0CW01 314 aa24.6■■□□□ 1.53
PSMB4-205ENST00000493673 MYOM3Q5VTT5 1437 aa24.59■■□□□ 1.53
PSMB4-205ENST00000493673 MIA2Q96PC5 1412 aa24.59■■□□□ 1.53
PSMB4-205ENST00000493673 C9orf84Q5VXU9 1444 aa24.59■■□□□ 1.53
PSMB4-205ENST00000493673 MLECQ14165 292 aa24.58■■□□□ 1.53
PSMB4-205ENST00000493673 HECW2Q9P2P5 1572 aa24.56■■□□□ 1.52
PSMB4-205ENST00000493673 MBD5Q9P267 1494 aa24.56■■□□□ 1.52
PSMB4-205ENST00000493673 CAMSAP2Q08AD1 1489 aa24.55■■□□□ 1.52
PSMB4-205ENST00000493673 RTEL1-TNFRSF6BF6WH68 1400 aa24.5■■□□□ 1.51
PSMB4-205ENST00000493673 CCDC141Q6ZP82 1450 aa24.5■■□□□ 1.51
PSMB4-205ENST00000493673 ESF1Q9H501 851 aaKnown RBP24.48■■□□□ 1.51
PSMB4-205ENST00000493673 DIP2CQ9Y2E4 1556 aa24.47■■□□□ 1.51
PSMB4-205ENST00000493673 ATP7AQ04656 1500 aa24.46■■□□□ 1.51
PSMB4-205ENST00000493673 PPARGC1BQ86YN6 1023 aaKnown RBP24.46■■□□□ 1.51
PSMB4-205ENST00000493673 KIDINS220Q9ULH0 1771 aa24.45■■□□□ 1.5
PSMB4-205ENST00000493673 FGD6Q6ZV73 1430 aa24.44■■□□□ 1.5
PSMB4-205ENST00000493673 BCORL1Q5H9F3 1711 aa24.43■■□□□ 1.5
PSMB4-205ENST00000493673 REREQ9P2R6 1566 aa24.43■■□□□ 1.5
PSMB4-205ENST00000493673 ABCA6Q8N139 1617 aa24.42■■□□□ 1.5
PSMB4-205ENST00000493673 ARHGEF5Q12774 1597 aa24.42■■□□□ 1.5
PSMB4-205ENST00000493673 FAM50AQ14320 339 aaKnown RBP24.42■■□□□ 1.5
PSMB4-205ENST00000493673 A2MP01023 1474 aa24.41■■□□□ 1.5
PSMB4-205ENST00000493673 ADAMTSL3P82987 1691 aa24.41■■□□□ 1.5
PSMB4-205ENST00000493673 AGLP35573 1532 aa24.4■■□□□ 1.5
PSMB4-205ENST00000493673 DHX29Q7Z478 1369 aaKnown RBP24.39■■□□□ 1.5
PSMB4-205ENST00000493673 PTPRMP28827 1452 aa24.39■■□□□ 1.5
PSMB4-205ENST00000493673 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
PSMB4-205ENST00000493673 INO80Q9ULG1 1556 aaPredicted RBP24.38■■□□□ 1.49
PSMB4-205ENST00000493673 GGT6Q6P531 493 aa24.37■■□□□ 1.49
PSMB4-205ENST00000493673 PTPN23Q9H3S7 1636 aa24.36■■□□□ 1.49
PSMB4-205ENST00000493673 PPP6R1Q9UPN7 881 aa24.35■■□□□ 1.49
PSMB4-205ENST00000493673 TCOF1Q13428 1488 aaKnown RBP24.35■■□□□ 1.49
PSMB4-205ENST00000493673 SIGLEC1Q9BZZ2 1709 aa24.34■■□□□ 1.49
PSMB4-205ENST00000493673 MADDQ8WXG6 1647 aa24.34■■□□□ 1.49
PSMB4-205ENST00000493673 KIF3BO15066 747 aa24.34■■□□□ 1.49
PSMB4-205ENST00000493673 ABCC5O15440 1437 aa24.32■■□□□ 1.48
PSMB4-205ENST00000493673 CHIC2Q9UKJ5 165 aa24.3■■□□□ 1.48
PSMB4-205ENST00000493673 DAPK1P53355 1430 aa24.29■■□□□ 1.48
PSMB4-205ENST00000493673 RRP7BPQ9NSQ0 103 aa24.29■■□□□ 1.48
PSMB4-205ENST00000493673 ADGBQ8N7X0 1667 aa24.28■■□□□ 1.48
PSMB4-205ENST00000493673 CEBPAP49715 358 aaPredicted RBP24.27■■□□□ 1.48
PSMB4-205ENST00000493673 CNTLNQ9NXG0 1405 aa24.27■■□□□ 1.48
PSMB4-205ENST00000493673 MAST1Q9Y2H9 1570 aa24.27■■□□□ 1.48
PSMB4-205ENST00000493673 RIMS1Q86UR5 1692 aaKnown RBP24.27■■□□□ 1.48
PSMB4-205ENST00000493673 ANKRD30AQ9BXX3 1397 aa24.25■■□□□ 1.47
PSMB4-205ENST00000493673 PLXNC1O60486 1568 aa24.25■■□□□ 1.47
PSMB4-205ENST00000493673 SHANK2Q9UPX8 1470 aa24.25■■□□□ 1.47
PSMB4-205ENST00000493673 KIF15Q9NS87 1388 aa24.22■■□□□ 1.47
PSMB4-205ENST00000493673 FER1L4A9Z1Z3 1794 aa24.22■■□□□ 1.47
PSMB4-205ENST00000493673 WASHC2CQ9Y4E1 1318 aa24.21■■□□□ 1.47
PSMB4-205ENST00000493673 ZMYM3Q14202 1370 aa24.2■■□□□ 1.47
PSMB4-205ENST00000493673 DNMT1P26358 1616 aaKnown RBP24.2■■□□□ 1.46
PSMB4-205ENST00000493673 ITGAEP38570 1179 aa24.19■■□□□ 1.46
PSMB4-205ENST00000493673 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.46
PSMB4-205ENST00000493673 DUOX2Q9NRD8 1548 aa24.18■■□□□ 1.46
PSMB4-205ENST00000493673 NCOA1Q15788 1441 aa24.16■■□□□ 1.46
PSMB4-205ENST00000493673 ERBINQ96RT1 1412 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 234.2 ms