RNA–Protein interactions for RNA: ENST00000493622.5

PHGDH-206, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 742 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-206ENST00000493622 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
PHGDH-206ENST00000493622 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-206ENST00000493622 PREX2Q70Z35 1606 aa13.3□□□□□ -0.28
PHGDH-206ENST00000493622 ABCC5O15440 1437 aa13.3□□□□□ -0.28
PHGDH-206ENST00000493622 UHRF1BP1LA0JNW5 1464 aa13.29□□□□□ -0.28
PHGDH-206ENST00000493622 ROCK1Q13464 1354 aa13.28□□□□□ -0.28
PHGDH-206ENST00000493622 ZCCHC11Q5TAX3 1644 aaKnown RBP13.28□□□□□ -0.28
PHGDH-206ENST00000493622 DENND4BO75064 1496 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-206ENST00000493622 ADGRL2O95490 1459 aa13.27□□□□□ -0.29
PHGDH-206ENST00000493622 ARHGEF5Q12774 1597 aa13.25□□□□□ -0.29
PHGDH-206ENST00000493622 TTC37Q6PGP7 1564 aa13.25□□□□□ -0.29
PHGDH-206ENST00000493622 MYO5CQ9NQX4 1742 aa13.24□□□□□ -0.29
PHGDH-206ENST00000493622 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
PHGDH-206ENST00000493622 SHANK2Q9UPX8 1470 aa13.23□□□□□ -0.29
PHGDH-206ENST00000493622 ZNF644Q9H582 1327 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-206ENST00000493622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.296e-6■■■■■ 38.2
PHGDH-206ENST00000493622 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
PHGDH-206ENST00000493622 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
PHGDH-206ENST00000493622 PLEKHD1A6NEE1 506 aa13.2□□□□□ -0.3
PHGDH-206ENST00000493622 RRP7BPQ9NSQ0 103 aa13.18□□□□□ -0.3
PHGDH-206ENST00000493622 MBD5Q9P267 1494 aa13.17□□□□□ -0.3
PHGDH-206ENST00000493622 MAST1Q9Y2H9 1570 aa13.17□□□□□ -0.3
PHGDH-206ENST00000493622 NCOA1Q15788 1441 aa13.17□□□□□ -0.3
PHGDH-206ENST00000493622 CFDP1Q9UEE9 299 aaPredicted RBP13.17□□□□□ -0.3
PHGDH-206ENST00000493622 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
PHGDH-206ENST00000493622 SIN3AQ96ST3 1273 aa13.15□□□□□ -0.3
PHGDH-206ENST00000493622 TIMELESSQ9UNS1 1208 aa13.14□□□□□ -0.31
PHGDH-206ENST00000493622 PZPP20742 1482 aa13.14□□□□□ -0.31
PHGDH-206ENST00000493622 KDM5DQ9BY66 1539 aa13.13□□□□□ -0.31
PHGDH-206ENST00000493622 C9orf84Q5VXU9 1444 aa13.13□□□□□ -0.31
PHGDH-206ENST00000493622 DIEXFQ68CQ4 756 aaKnown RBP13.12□□□□□ -0.31
PHGDH-206ENST00000493622 ARAP3Q8WWN8 1544 aa13.12□□□□□ -0.31
PHGDH-206ENST00000493622 SYCP2Q9BX26 1530 aa13.12□□□□□ -0.31
PHGDH-206ENST00000493622 CCDC141Q6ZP82 1450 aa13.11□□□□□ -0.31
PHGDH-206ENST00000493622 PLXNC1O60486 1568 aa13.11□□□□□ -0.31
PHGDH-206ENST00000493622 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
PHGDH-206ENST00000493622 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
PHGDH-206ENST00000493622 ABCA9Q8IUA7 1624 aa13.1□□□□□ -0.31
PHGDH-206ENST00000493622 ABCC1P33527 1531 aa13.09□□□□□ -0.31
PHGDH-206ENST00000493622 FOXD1Q16676 465 aa13.09□□□□□ -0.31
PHGDH-206ENST00000493622 ANKRD30AQ9BXX3 1397 aa13.08□□□□□ -0.31
PHGDH-206ENST00000493622 KIAA1107Q9UPP5 1409 aa13.08□□□□□ -0.32
PHGDH-206ENST00000493622 PLCH2O75038 1416 aa13.07□□□□□ -0.32
PHGDH-206ENST00000493622 PLEKHH2Q8IVE3 1493 aa13.07□□□□□ -0.32
PHGDH-206ENST00000493622 WDR7Q9Y4E6 1490 aa13.07□□□□□ -0.32
PHGDH-206ENST00000493622 ARHGEF12Q9NZN5 1544 aa13.07□□□□□ -0.32
PHGDH-206ENST00000493622 UNC13BO14795 1591 aa13.07□□□□□ -0.32
PHGDH-206ENST00000493622 ANKRD30BQ9BXX2 1392 aa13.07□□□□□ -0.32
PHGDH-206ENST00000493622 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-206ENST00000493622 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
PHGDH-206ENST00000493622 PPP1R15AO75807 674 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-206ENST00000493622 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
PHGDH-206ENST00000493622 TEX14Q8IWB6 1497 aa13.04□□□□□ -0.32
PHGDH-206ENST00000493622 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
PHGDH-206ENST00000493622 RPRD2Q5VT52 1461 aaKnown RBP13.04□□□□□ -0.32
PHGDH-206ENST00000493622 TONSLQ96HA7 1378 aa13.02□□□□□ -0.33
PHGDH-206ENST00000493622 KIF15Q9NS87 1388 aa13.02□□□□□ -0.33
PHGDH-206ENST00000493622 HNRNPMP52272 730 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■■■□ 22.8
PHGDH-206ENST00000493622 RSPH4AQ5TD94 716 aa13.01□□□□□ -0.33
PHGDH-206ENST00000493622 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
PHGDH-206ENST00000493622 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
PHGDH-206ENST00000493622 IQGAP3Q86VI3 1631 aa13□□□□□ -0.33
PHGDH-206ENST00000493622 MAGI2Q86UL8 1455 aa13□□□□□ -0.33
PHGDH-206ENST00000493622 INO80Q9ULG1 1556 aaPredicted RBP12.99□□□□□ -0.33
PHGDH-206ENST00000493622 ZFYVE16Q7Z3T8 1539 aa12.98□□□□□ -0.33
PHGDH-206ENST00000493622 ASXL2Q76L83 1435 aa12.98□□□□□ -0.33
PHGDH-206ENST00000493622 DUOX2Q9NRD8 1548 aa12.98□□□□□ -0.33
PHGDH-206ENST00000493622 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.33
PHGDH-206ENST00000493622 FAM135AQ9P2D6 1515 aa12.96□□□□□ -0.33
PHGDH-206ENST00000493622 DEPDC5O75140 1603 aa12.95□□□□□ -0.34
PHGDH-206ENST00000493622 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
PHGDH-206ENST00000493622 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
PHGDH-206ENST00000493622 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
PHGDH-206ENST00000493622 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
PHGDH-206ENST00000493622 RTEL1-TNFRSF6BF6WH68 1400 aa12.94□□□□□ -0.34
PHGDH-206ENST00000493622 ERBINQ96RT1 1412 aa12.94□□□□□ -0.34
PHGDH-206ENST00000493622 POLR1AO95602 1720 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-206ENST00000493622 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
PHGDH-206ENST00000493622 CFAP74Q9C0B2 1584 aa12.93□□□□□ -0.34
PHGDH-206ENST00000493622 FANCAO15360 1455 aa12.92□□□□□ -0.34
PHGDH-206ENST00000493622 MIER1Q8N108 512 aa12.92□□□□□ -0.34
PHGDH-206ENST00000493622 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
PHGDH-206ENST00000493622 KIDINS220Q9ULH0 1771 aa12.91□□□□□ -0.34
PHGDH-206ENST00000493622 NUP155O75694 1391 aa12.91□□□□□ -0.34
PHGDH-206ENST00000493622 L3MBTL2Q969R5 705 aa12.9□□□□□ -0.34
PHGDH-206ENST00000493622 RIMBP3CA6NJZ7 1639 aa12.9□□□□□ -0.34
PHGDH-206ENST00000493622 RIMBP3BA6NNM3 1639 aa12.9□□□□□ -0.34
PHGDH-206ENST00000493622 EIF2AK4Q9P2K8 1649 aaKnown RBP12.9□□□□□ -0.34
PHGDH-206ENST00000493622 RIMBP3Q9UFD9 1639 aa12.9□□□□□ -0.34
PHGDH-206ENST00000493622 VWDEQ8N2E2 1590 aa12.89□□□□□ -0.35
PHGDH-206ENST00000493622 PKD2Q13563 968 aa12.88□□□□□ -0.35
PHGDH-206ENST00000493622 KDM5CP41229 1560 aa12.88□□□□□ -0.35
PHGDH-206ENST00000493622 MROH1Q8NDA8 1641 aa12.88□□□□□ -0.35
PHGDH-206ENST00000493622 E9PCH4 1651 aa12.87□□□□□ -0.35
PHGDH-206ENST00000493622 ADGRL1O94910 1474 aa12.87□□□□□ -0.35
PHGDH-206ENST00000493622 PLPPR3Q6T4P5 718 aa12.87□□□□□ -0.35
PHGDH-206ENST00000493622 MAP3K4Q9Y6R4 1608 aa12.87□□□□□ -0.35
PHGDH-206ENST00000493622 ATP10AO60312 1499 aa12.86□□□□□ -0.35
PHGDH-206ENST00000493622 PLA2R1Q13018 1463 aa12.86□□□□□ -0.35
PHGDH-206ENST00000493622 UHRF1BP1Q6BDS2 1440 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms