RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 NCOA2Q15596 1464 aa13.85□□□□□ -0.19
TSC1-207ENST00000493467 MYOM3Q5VTT5 1437 aa13.85□□□□□ -0.19
TSC1-207ENST00000493467 PROM2Q8N271 834 aa13.85□□□□□ -0.19
TSC1-207ENST00000493467 UACAQ9BZF9 1416 aa13.85□□□□□ -0.19
TSC1-207ENST00000493467 MTUS2Q5JR59 1369 aa13.85□□□□□ -0.19
TSC1-207ENST00000493467 UGGT2Q9NYU1 1516 aa13.85□□□□□ -0.19
TSC1-207ENST00000493467 PBRM1Q86U86 1689 aa13.84□□□□□ -0.19
TSC1-207ENST00000493467 SIN3AQ96ST3 1273 aa13.83□□□□□ -0.2
TSC1-207ENST00000493467 GCC2Q8IWJ2 1684 aa13.82□□□□□ -0.2
TSC1-207ENST00000493467 ATP1B4Q9UN42 357 aaPredicted RBP13.82□□□□□ -0.2
TSC1-207ENST00000493467 HECW1Q76N89 1606 aa13.82□□□□□ -0.2
TSC1-207ENST00000493467 PTPRKQ15262 1439 aa13.82□□□□□ -0.2
TSC1-207ENST00000493467 PODXL2Q9NZ53 605 aa13.82□□□□□ -0.2
TSC1-207ENST00000493467 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
TSC1-207ENST00000493467 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
TSC1-207ENST00000493467 TCOF1Q13428 1488 aaKnown RBP13.81□□□□□ -0.2
TSC1-207ENST00000493467 PPP1R15AO75807 674 aaPredicted RBP13.8□□□□□ -0.2
TSC1-207ENST00000493467 MYT1Q01538 1121 aa13.8□□□□□ -0.2
TSC1-207ENST00000493467 SUPT16HQ9Y5B9 1047 aaKnown RBP13.8□□□□□ -0.2
TSC1-207ENST00000493467 NAIPQ13075 1403 aa13.8□□□□□ -0.2
TSC1-207ENST00000493467 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
TSC1-207ENST00000493467 AKNAQ7Z591 1439 aa13.79□□□□□ -0.2
TSC1-207ENST00000493467 MAGI3Q5TCQ9 1506 aa13.78□□□□□ -0.2
TSC1-207ENST00000493467 IQGAP2Q13576 1575 aa13.77□□□□□ -0.2
TSC1-207ENST00000493467 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
TSC1-207ENST00000493467 KDM5BQ9UGL1 1544 aa13.76□□□□□ -0.21
TSC1-207ENST00000493467 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
TSC1-207ENST00000493467 RGL2O15211 777 aa13.76□□□□□ -0.21
TSC1-207ENST00000493467 TONSLQ96HA7 1378 aa13.75□□□□□ -0.21
TSC1-207ENST00000493467 WDR62O43379 1518 aa13.74□□□□□ -0.21
TSC1-207ENST00000493467 CCER2I3L3R5 266 aa13.73□□□□□ -0.21
TSC1-207ENST00000493467 DDX10Q13206 875 aaKnown RBP13.72□□□□□ -0.21
TSC1-207ENST00000493467 EPRSP07814 1512 aaKnown RBP13.72□□□□□ -0.21
TSC1-207ENST00000493467 MIA2Q96PC5 1412 aa13.72□□□□□ -0.21
TSC1-207ENST00000493467 KCNH8Q96L42 1107 aa13.7□□□□□ -0.22
TSC1-207ENST00000493467 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
TSC1-207ENST00000493467 DENND4BO75064 1496 aaPredicted RBP13.67□□□□□ -0.22
TSC1-207ENST00000493467 ANP32CO43423 234 aa13.65□□□□□ -0.22
TSC1-207ENST00000493467 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
TSC1-207ENST00000493467 CDK13Q14004 1512 aaKnown RBP13.65□□□□□ -0.22
TSC1-207ENST00000493467 KDM6BO15054 1643 aa13.65□□□□□ -0.22
TSC1-207ENST00000493467 MSH5O43196 834 aa13.64□□□□□ -0.23
TSC1-207ENST00000493467 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
TSC1-207ENST00000493467 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
TSC1-207ENST00000493467 IFT140Q96RY7 1462 aa13.63□□□□□ -0.23
TSC1-207ENST00000493467 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
TSC1-207ENST00000493467 ROCK1Q13464 1354 aa13.61□□□□□ -0.23
TSC1-207ENST00000493467 KIAA0586Q9BVV6 1533 aa13.6□□□□□ -0.23
TSC1-207ENST00000493467 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
TSC1-207ENST00000493467 DISP1Q96F81 1524 aa13.59□□□□□ -0.23
TSC1-207ENST00000493467 RAPGEF6Q8TEU7 1601 aa13.59□□□□□ -0.23
TSC1-207ENST00000493467 HIRIP3Q9BW71 556 aaPredicted RBP13.59□□□□□ -0.23
TSC1-207ENST00000493467 SAMD1Q6SPF0 538 aaPredicted RBP13.58□□□□□ -0.24
TSC1-207ENST00000493467 DAPK1P53355 1430 aa13.58□□□□□ -0.24
TSC1-207ENST00000493467 SPOCK2Q92563 424 aa13.56□□□□□ -0.24
TSC1-207ENST00000493467 NUP153P49790 1475 aaKnown RBP13.56□□□□□ -0.24
TSC1-207ENST00000493467 RRP7BPQ9NSQ0 103 aa13.56□□□□□ -0.24
TSC1-207ENST00000493467 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
TSC1-207ENST00000493467 ITSN2Q9NZM3 1697 aa13.55□□□□□ -0.24
TSC1-207ENST00000493467 ADCY10Q96PN6 1610 aa13.55□□□□□ -0.24
TSC1-207ENST00000493467 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
TSC1-207ENST00000493467 ADGBQ8N7X0 1667 aa13.54□□□□□ -0.24
TSC1-207ENST00000493467 GRIN2AQ12879 1464 aa13.54□□□□□ -0.24
TSC1-207ENST00000493467 RPRD2Q5VT52 1461 aaKnown RBP13.54□□□□□ -0.24
TSC1-207ENST00000493467 EIF4G3O43432 1585 aaKnown RBP13.54□□□□□ -0.24
TSC1-207ENST00000493467 ABCC5O15440 1437 aa13.54□□□□□ -0.24
TSC1-207ENST00000493467 ZNF608Q9ULD9 1512 aaPredicted RBP13.53□□□□□ -0.24
TSC1-207ENST00000493467 TEX14Q8IWB6 1497 aa13.53□□□□□ -0.24
TSC1-207ENST00000493467 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.24
TSC1-207ENST00000493467 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.25
TSC1-207ENST00000493467 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.25
TSC1-207ENST00000493467 CROCC2H7BZ55 1655 aa13.52□□□□□ -0.25
TSC1-207ENST00000493467 ANKRD30BQ9BXX2 1392 aa13.51□□□□□ -0.25
TSC1-207ENST00000493467 NEFLP07196 543 aa13.51□□□□□ -0.25
TSC1-207ENST00000493467 HSPA5P11021 654 aaKnown RBP13.51□□□□□ -0.25
TSC1-207ENST00000493467 NCOA1Q15788 1441 aa13.5□□□□□ -0.25
TSC1-207ENST00000493467 WASHC2AQ641Q2 1341 aa13.5□□□□□ -0.25
TSC1-207ENST00000493467 TRIM52Q96A61 297 aa13.49□□□□□ -0.25
TSC1-207ENST00000493467 TROQ12816 1431 aaPredicted RBP13.49□□□□□ -0.25
TSC1-207ENST00000493467 EIF4G2P78344 907 aaKnown RBP eCLIP13.49□□□□□ -0.25
TSC1-207ENST00000493467 ADGRL2O95490 1459 aa13.49□□□□□ -0.25
TSC1-207ENST00000493467 MAGI1Q96QZ7 1491 aaPredicted RBP13.49□□□□□ -0.25
TSC1-207ENST00000493467 CAMSAP2Q08AD1 1489 aa13.47□□□□□ -0.25
TSC1-207ENST00000493467 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
TSC1-207ENST00000493467 CEP170Q5SW79 1584 aa13.46□□□□□ -0.26
TSC1-207ENST00000493467 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
TSC1-207ENST00000493467 CDK11AQ9UQ88 783 aaPredicted RBP13.45□□□□□ -0.26
TSC1-207ENST00000493467 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
TSC1-207ENST00000493467 PZPP20742 1482 aa13.45□□□□□ -0.26
TSC1-207ENST00000493467 SPATA31E1Q6ZUB1 1445 aa13.45□□□□□ -0.26
TSC1-207ENST00000493467 MBD5Q9P267 1494 aa13.45□□□□□ -0.26
TSC1-207ENST00000493467 SYNJ2O15056 1496 aa13.43□□□□□ -0.26
TSC1-207ENST00000493467 KIF14Q15058 1648 aa13.43□□□□□ -0.26
TSC1-207ENST00000493467 GPATCH8Q9UKJ3 1502 aaKnown RBP13.42□□□□□ -0.26
TSC1-207ENST00000493467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.42□□□□□ -0.261e-7■□□□□ 9.3
TSC1-207ENST00000493467 SHANK2Q9UPX8 1470 aa13.41□□□□□ -0.26
TSC1-207ENST00000493467 NUP160Q12769 1436 aa13.41□□□□□ -0.26
TSC1-207ENST00000493467 PRG4Q92954 1404 aaPredicted RBP13.41□□□□□ -0.26
TSC1-207ENST00000493467 CDC42BPAQ5VT25 1732 aa13.39□□□□□ -0.27
TSC1-207ENST00000493467 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms