RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 MAP3K4Q9Y6R4 1608 aa14.4□□□□□ -0.1
CSTF1-206ENST00000493039 CDC42BPBQ9Y5S2 1711 aa14.39□□□□□ -0.11
CSTF1-206ENST00000493039 MIA2Q96PC5 1412 aa14.39□□□□□ -0.11
CSTF1-206ENST00000493039 RRBP1Q9P2E9 1410 aaKnown RBP14.38□□□□□ -0.11
CSTF1-206ENST00000493039 PREX2Q70Z35 1606 aa14.37□□□□□ -0.11
CSTF1-206ENST00000493039 ARAP3Q8WWN8 1544 aa14.37□□□□□ -0.11
CSTF1-206ENST00000493039 EFCAB2Q5VUJ9 269 aa14.37□□□□□ -0.11
CSTF1-206ENST00000493039 DAXXQ9UER7 740 aaPredicted RBP14.37□□□□□ -0.11
CSTF1-206ENST00000493039 ZNF777Q9ULD5 760 aaPredicted RBP14.37□□□□□ -0.11
CSTF1-206ENST00000493039 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
CSTF1-206ENST00000493039 MYO5CQ9NQX4 1742 aa14.36□□□□□ -0.11
CSTF1-206ENST00000493039 PPRC1Q5VV67 1664 aaKnown RBP14.36□□□□□ -0.11
CSTF1-206ENST00000493039 FANCAO15360 1455 aa14.35□□□□□ -0.11
CSTF1-206ENST00000493039 TCOF1Q13428 1488 aaKnown RBP14.34□□□□□ -0.11
CSTF1-206ENST00000493039 ARHGEF12Q9NZN5 1544 aa14.33□□□□□ -0.11
CSTF1-206ENST00000493039 SAMD9LQ8IVG5 1584 aa14.33□□□□□ -0.12
CSTF1-206ENST00000493039 ITSN2Q9NZM3 1697 aa14.33□□□□□ -0.12
CSTF1-206ENST00000493039 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.12
CSTF1-206ENST00000493039 FAM50AQ14320 339 aaKnown RBP14.33□□□□□ -0.12
CSTF1-206ENST00000493039 AKNAQ7Z591 1439 aa14.33□□□□□ -0.12
CSTF1-206ENST00000493039 PTPN23Q9H3S7 1636 aa14.32□□□□□ -0.12
CSTF1-206ENST00000493039 CAMSAP2Q08AD1 1489 aa14.32□□□□□ -0.12
CSTF1-206ENST00000493039 MBD5Q9P267 1494 aa14.32□□□□□ -0.12
CSTF1-206ENST00000493039 TSPOAP1O95153 1857 aa14.31□□□□□ -0.12
CSTF1-206ENST00000493039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSTF1-206ENST00000493039 NEO1Q92859 1461 aa14.31□□□□□ -0.12
CSTF1-206ENST00000493039 KIAA1107Q9UPP5 1409 aa14.3□□□□□ -0.12
CSTF1-206ENST00000493039 COL17A1Q9UMD9 1497 aaPredicted RBP14.3□□□□□ -0.12
CSTF1-206ENST00000493039 ERICH6Q7L0X2 663 aa14.29□□□□□ -0.12
CSTF1-206ENST00000493039 SCAPERQ9BY12 1400 aa14.29□□□□□ -0.12
CSTF1-206ENST00000493039 TRIM26Q12899 539 aaPredicted RBP14.29□□□□□ -0.12
CSTF1-206ENST00000493039 PTPRKQ15262 1439 aa14.28□□□□□ -0.12
CSTF1-206ENST00000493039 TRAPPC8Q9Y2L5 1435 aa14.28□□□□□ -0.12
CSTF1-206ENST00000493039 ADGRL1O94910 1474 aa14.28□□□□□ -0.12
CSTF1-206ENST00000493039 AFAP1Q8N556 730 aa14.28□□□□□ -0.12
CSTF1-206ENST00000493039 ABCC1P33527 1531 aa14.28□□□□□ -0.12
CSTF1-206ENST00000493039 TEX14Q8IWB6 1497 aa14.28□□□□□ -0.12
CSTF1-206ENST00000493039 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.12
CSTF1-206ENST00000493039 ABCC5O15440 1437 aa14.27□□□□□ -0.13
CSTF1-206ENST00000493039 RAPGEF3O95398 923 aa14.26□□□□□ -0.13
CSTF1-206ENST00000493039 PLEKHH2Q8IVE3 1493 aa14.26□□□□□ -0.13
CSTF1-206ENST00000493039 ITGAEP38570 1179 aa14.25□□□□□ -0.13
CSTF1-206ENST00000493039 DAPK1P53355 1430 aa14.24□□□□□ -0.13
CSTF1-206ENST00000493039 RSPH4AQ5TD94 716 aa14.23□□□□□ -0.13
CSTF1-206ENST00000493039 CFAP74Q9C0B2 1584 aa14.23□□□□□ -0.13
CSTF1-206ENST00000493039 ARHGEF5Q12774 1597 aa14.22□□□□□ -0.13
CSTF1-206ENST00000493039 POGZQ7Z3K3 1410 aa14.22□□□□□ -0.13
CSTF1-206ENST00000493039 DENND4BO75064 1496 aaPredicted RBP14.22□□□□□ -0.13
CSTF1-206ENST00000493039 CHIC2Q9UKJ5 165 aa14.22□□□□□ -0.13
CSTF1-206ENST00000493039 DNMT1P26358 1616 aaKnown RBP14.21□□□□□ -0.13
CSTF1-206ENST00000493039 CCDC141Q6ZP82 1450 aa14.21□□□□□ -0.13
CSTF1-206ENST00000493039 PCGF6Q9BYE7 350 aa14.19□□□□□ -0.14
CSTF1-206ENST00000493039 FRMPD1Q5SYB0 1578 aa14.19□□□□□ -0.14
CSTF1-206ENST00000493039 ZNF518AQ6AHZ1 1483 aa14.19□□□□□ -0.14
CSTF1-206ENST00000493039 TSPY4P0CV99 314 aa14.18□□□□□ -0.14
CSTF1-206ENST00000493039 TSPY10P0CW01 314 aa14.18□□□□□ -0.14
CSTF1-206ENST00000493039 KDM5CP41229 1560 aa14.18□□□□□ -0.14
CSTF1-206ENST00000493039 C9orf84Q5VXU9 1444 aa14.17□□□□□ -0.14
CSTF1-206ENST00000493039 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
CSTF1-206ENST00000493039 RICTORQ6R327 1708 aa14.17□□□□□ -0.14
CSTF1-206ENST00000493039 SHANK2Q9UPX8 1470 aa14.16□□□□□ -0.14
CSTF1-206ENST00000493039 NCOA1Q15788 1441 aa14.16□□□□□ -0.14
CSTF1-206ENST00000493039 MLH3Q9UHC1 1453 aa14.15□□□□□ -0.14
CSTF1-206ENST00000493039 RRP7BPQ9NSQ0 103 aa14.15□□□□□ -0.14
CSTF1-206ENST00000493039 RTEL1-TNFRSF6BF6WH68 1400 aa14.15□□□□□ -0.14
CSTF1-206ENST00000493039 CROCC2H7BZ55 1655 aa14.14□□□□□ -0.15
CSTF1-206ENST00000493039 ADGRL2O95490 1459 aa14.14□□□□□ -0.15
CSTF1-206ENST00000493039 MAST1Q9Y2H9 1570 aa14.13□□□□□ -0.15
CSTF1-206ENST00000493039 ROCK1Q13464 1354 aa14.13□□□□□ -0.15
CSTF1-206ENST00000493039 ZFYVE16Q7Z3T8 1539 aa14.13□□□□□ -0.15
CSTF1-206ENST00000493039 YEATS2Q9ULM3 1422 aa14.13□□□□□ -0.15
CSTF1-206ENST00000493039 ZMYM4Q5VZL5 1548 aa14.12□□□□□ -0.15
CSTF1-206ENST00000493039 INO80Q9ULG1 1556 aaPredicted RBP14.12□□□□□ -0.15
CSTF1-206ENST00000493039 KIDINS220Q9ULH0 1771 aa14.12□□□□□ -0.15
CSTF1-206ENST00000493039 KDM6BO15054 1643 aa14.12□□□□□ -0.15
CSTF1-206ENST00000493039 ATP7AQ04656 1500 aa14.11□□□□□ -0.15
CSTF1-206ENST00000493039 NAIPQ13075 1403 aa14.11□□□□□ -0.15
CSTF1-206ENST00000493039 ANKRD30AQ9BXX3 1397 aa14.11□□□□□ -0.15
CSTF1-206ENST00000493039 HFM1A2PYH4 1435 aa14.1□□□□□ -0.15
CSTF1-206ENST00000493039 KIF15Q9NS87 1388 aa14.1□□□□□ -0.15
CSTF1-206ENST00000493039 HECW2Q9P2P5 1572 aa14.09□□□□□ -0.15
CSTF1-206ENST00000493039 MAGI2Q86UL8 1455 aa14.09□□□□□ -0.15
CSTF1-206ENST00000493039 MYT1LQ9UL68 1186 aa14.09□□□□□ -0.15
CSTF1-206ENST00000493039 PLXNC1O60486 1568 aa14.07□□□□□ -0.16
CSTF1-206ENST00000493039 ABCA6Q8N139 1617 aa14.06□□□□□ -0.16
CSTF1-206ENST00000493039 DIP2CQ9Y2E4 1556 aa14.06□□□□□ -0.16
CSTF1-206ENST00000493039 DHX29Q7Z478 1369 aaKnown RBP14.05□□□□□ -0.16
CSTF1-206ENST00000493039 ADGBQ8N7X0 1667 aa14.05□□□□□ -0.16
CSTF1-206ENST00000493039 SETD5Q9C0A6 1442 aa14.05□□□□□ -0.16
CSTF1-206ENST00000493039 ANKRD50Q9ULJ7 1429 aa14.05□□□□□ -0.16
CSTF1-206ENST00000493039 ATP10AO60312 1499 aa14.04□□□□□ -0.16
CSTF1-206ENST00000493039 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
CSTF1-206ENST00000493039 A2MP01023 1474 aa14.03□□□□□ -0.16
CSTF1-206ENST00000493039 DUOX2Q9NRD8 1548 aa14.03□□□□□ -0.16
CSTF1-206ENST00000493039 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.17
CSTF1-206ENST00000493039 SIGLEC1Q9BZZ2 1709 aa14.01□□□□□ -0.17
CSTF1-206ENST00000493039 GCC2Q8IWJ2 1684 aa14□□□□□ -0.17
CSTF1-206ENST00000493039 ERBINQ96RT1 1412 aa14□□□□□ -0.17
CSTF1-206ENST00000493039 KIF3BO15066 747 aa13.99□□□□□ -0.17
CSTF1-206ENST00000493039 HRCP23327 699 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms