RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
SPTA1-208ENST00000492934 FAM69CQ0P6D2 419 aa12.57□□□□□ -0.4
SPTA1-208ENST00000492934 POTEGQ6S5H5 508 aa12.57□□□□□ -0.4
SPTA1-208ENST00000492934 MNX1P50219 401 aaPredicted RBP12.56□□□□□ -0.4
SPTA1-208ENST00000492934 KDM6BO15054 1643 aa12.55□□□□□ -0.4
SPTA1-208ENST00000492934 CARMIL2Q6F5E8 1435 aa12.54□□□□□ -0.4
SPTA1-208ENST00000492934 PTPRGP23470 1445 aa12.54□□□□□ -0.4
SPTA1-208ENST00000492934 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
SPTA1-208ENST00000492934 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
SPTA1-208ENST00000492934 TNIKQ9UKE5 1360 aa12.52□□□□□ -0.41
SPTA1-208ENST00000492934 ABCC2Q92887 1545 aa12.52□□□□□ -0.41
SPTA1-208ENST00000492934 METRNQ9UJH8 293 aa12.51□□□□□ -0.41
SPTA1-208ENST00000492934 C7P10643 843 aa12.5□□□□□ -0.41
SPTA1-208ENST00000492934 SLC39A7Q92504 469 aa12.5□□□□□ -0.41
SPTA1-208ENST00000492934 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
SPTA1-208ENST00000492934 MS4A3Q96HJ5 214 aa12.49□□□□□ -0.41
SPTA1-208ENST00000492934 PCDH10Q9P2E7 1040 aa12.49□□□□□ -0.41
SPTA1-208ENST00000492934 DISP1Q96F81 1524 aa12.48□□□□□ -0.41
SPTA1-208ENST00000492934 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
SPTA1-208ENST00000492934 RAPGEF2Q9Y4G8 1499 aa12.47□□□□□ -0.41
SPTA1-208ENST00000492934 ASXL2Q76L83 1435 aa12.47□□□□□ -0.41
SPTA1-208ENST00000492934 KIAA0556O60303 1618 aa12.47□□□□□ -0.41
SPTA1-208ENST00000492934 UGGT2Q9NYU1 1516 aa12.47□□□□□ -0.41
SPTA1-208ENST00000492934 UHRF1BP1LA0JNW5 1464 aa12.46□□□□□ -0.41
SPTA1-208ENST00000492934 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
SPTA1-208ENST00000492934 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.42
SPTA1-208ENST00000492934 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
SPTA1-208ENST00000492934 GLI2P10070 1586 aa12.44□□□□□ -0.42
SPTA1-208ENST00000492934 PPRC1Q5VV67 1664 aaKnown RBP12.44□□□□□ -0.42
SPTA1-208ENST00000492934 CTTNBP2Q8WZ74 1663 aa12.43□□□□□ -0.42
SPTA1-208ENST00000492934 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
SPTA1-208ENST00000492934 ZCCHC11Q5TAX3 1644 aaKnown RBP12.43□□□□□ -0.42
SPTA1-208ENST00000492934 KDM5BQ9UGL1 1544 aa12.42□□□□□ -0.42
SPTA1-208ENST00000492934 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.42
SPTA1-208ENST00000492934 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.42
SPTA1-208ENST00000492934 GOLGA3Q08378 1498 aa12.36□□□□□ -0.43
SPTA1-208ENST00000492934 TEX14Q8IWB6 1497 aa12.36□□□□□ -0.43
SPTA1-208ENST00000492934 WDR7Q9Y4E6 1490 aa12.36□□□□□ -0.43
SPTA1-208ENST00000492934 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
SPTA1-208ENST00000492934 SCUBE2Q9NQ36 999 aa12.35□□□□□ -0.43
SPTA1-208ENST00000492934 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
SPTA1-208ENST00000492934 ATN1P54259 1190 aaPredicted RBP12.33□□□□□ -0.44
SPTA1-208ENST00000492934 ABCA8O94911 1581 aa12.33□□□□□ -0.44
SPTA1-208ENST00000492934 ADGRL1O94910 1474 aa12.33□□□□□ -0.44
SPTA1-208ENST00000492934 PRXQ9BXM0 1461 aa12.33□□□□□ -0.44
SPTA1-208ENST00000492934 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
SPTA1-208ENST00000492934 LCE2DQ5TA82 110 aaPredicted RBP12.31□□□□□ -0.44
SPTA1-208ENST00000492934 FAM163AQ96GL9 167 aaPredicted RBP12.31□□□□□ -0.44
SPTA1-208ENST00000492934 COL17A1Q9UMD9 1497 aaPredicted RBP12.31□□□□□ -0.44
SPTA1-208ENST00000492934 CFAP43Q8NDM7 1665 aa12.29□□□□□ -0.44
SPTA1-208ENST00000492934 KIF12Q96FN5 646 aa12.28□□□□□ -0.44
SPTA1-208ENST00000492934 PROM2Q8N271 834 aa12.27□□□□□ -0.45
SPTA1-208ENST00000492934 MAGI3Q5TCQ9 1506 aa12.26□□□□□ -0.45
SPTA1-208ENST00000492934 CD109Q6YHK3 1445 aa12.25□□□□□ -0.45
SPTA1-208ENST00000492934 POTEFA5A3E0 1075 aa12.24□□□□□ -0.45
SPTA1-208ENST00000492934 SAMD9Q5K651 1589 aa12.24□□□□□ -0.45
SPTA1-208ENST00000492934 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
SPTA1-208ENST00000492934 FKBP8Q14318 412 aa12.22□□□□□ -0.45
SPTA1-208ENST00000492934 ARID3CA6NKF2 412 aa12.21□□□□□ -0.45
SPTA1-208ENST00000492934 TIE1P35590 1138 aa12.21□□□□□ -0.45
SPTA1-208ENST00000492934 KCNH8Q96L42 1107 aa12.21□□□□□ -0.45
SPTA1-208ENST00000492934 RAPGEF6Q8TEU7 1601 aa12.2□□□□□ -0.46
SPTA1-208ENST00000492934 KIF21BO75037 1637 aa12.19□□□□□ -0.46
SPTA1-208ENST00000492934 P3H3Q8IVL6 736 aa12.19□□□□□ -0.46
SPTA1-208ENST00000492934 TRPC6Q9Y210 931 aa12.19□□□□□ -0.46
SPTA1-208ENST00000492934 ATP10BO94823 1461 aa12.19□□□□□ -0.46
SPTA1-208ENST00000492934 HECW2Q9P2P5 1572 aa12.18□□□□□ -0.46
SPTA1-208ENST00000492934 FAM9AQ8IZU1 332 aaPredicted RBP12.18□□□□□ -0.46
SPTA1-208ENST00000492934 ABCA9Q8IUA7 1624 aa12.18□□□□□ -0.46
SPTA1-208ENST00000492934 MAP3K13O43283 966 aa12.17□□□□□ -0.46
SPTA1-208ENST00000492934 EEA1Q15075 1411 aa12.17□□□□□ -0.46
SPTA1-208ENST00000492934 ARAP3Q8WWN8 1544 aa12.16□□□□□ -0.46
SPTA1-208ENST00000492934 FHOD3Q2V2M9 1422 aa12.15□□□□□ -0.46
SPTA1-208ENST00000492934 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
SPTA1-208ENST00000492934 NUP153P49790 1475 aaKnown RBP12.14□□□□□ -0.47
SPTA1-208ENST00000492934 SEC24BO95487 1268 aa12.13□□□□□ -0.47
SPTA1-208ENST00000492934 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
SPTA1-208ENST00000492934 FRMPD1Q5SYB0 1578 aa12.11□□□□□ -0.47
SPTA1-208ENST00000492934 NEO1Q92859 1461 aa12.11□□□□□ -0.47
SPTA1-208ENST00000492934 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
SPTA1-208ENST00000492934 RANGAP1P46060 587 aaPredicted RBP12.11□□□□□ -0.47
SPTA1-208ENST00000492934 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
SPTA1-208ENST00000492934 COLQQ9Y215 455 aaPredicted RBP12.1□□□□□ -0.47
SPTA1-208ENST00000492934 PHLDB1Q86UU1 1377 aa12.09□□□□□ -0.47
SPTA1-208ENST00000492934 MIER1Q8N108 512 aa12.09□□□□□ -0.47
SPTA1-208ENST00000492934 ARHGEF40Q8TER5 1519 aa12.08□□□□□ -0.48
SPTA1-208ENST00000492934 CFAP74Q9C0B2 1584 aa12.08□□□□□ -0.48
SPTA1-208ENST00000492934 IER5LQ5T953 404 aa12.07□□□□□ -0.48
SPTA1-208ENST00000492934 TTC37Q6PGP7 1564 aa12.06□□□□□ -0.48
SPTA1-208ENST00000492934 CDAN1Q8IWY9 1227 aa12.06□□□□□ -0.48
SPTA1-208ENST00000492934 RAPGEF3O95398 923 aa12.05□□□□□ -0.48
SPTA1-208ENST00000492934 SGIP1Q9BQI5 828 aa12.05□□□□□ -0.48
SPTA1-208ENST00000492934 ADAMTSL3P82987 1691 aa12.05□□□□□ -0.48
SPTA1-208ENST00000492934 CDK13Q14004 1512 aaKnown RBP12.05□□□□□ -0.48
SPTA1-208ENST00000492934 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
SPTA1-208ENST00000492934 PTPRMP28827 1452 aa12.04□□□□□ -0.48
SPTA1-208ENST00000492934 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
SPTA1-208ENST00000492934 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
SPTA1-208ENST00000492934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPTA1-208ENST00000492934 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms