RNA–Protein interactions for RNA: ENST00000492622.6

FNDC3A-204, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,286 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-204ENST00000492622 FHAD1B1AJZ9 1412 aa11.15□□□□□ -0.62
FNDC3A-204ENST00000492622 RCAN3Q9UKA8 241 aa11.14□□□□□ -0.63
FNDC3A-204ENST00000492622 HSP90AB1P08238 724 aaKnown RBP11.14□□□□□ -0.63
FNDC3A-204ENST00000492622 FHOD3Q2V2M9 1422 aa11.14□□□□□ -0.63
FNDC3A-204ENST00000492622 SRPK2P78362 688 aaKnown RBP11.13□□□□□ -0.63
FNDC3A-204ENST00000492622 DNTTIP2Q5QJE6 756 aaKnown RBP11.13□□□□□ -0.63
FNDC3A-204ENST00000492622 GGT6Q6P531 493 aa11.13□□□□□ -0.63
FNDC3A-204ENST00000492622 GOLGA6L22H0YM25 854 aa11.13□□□□□ -0.63
FNDC3A-204ENST00000492622 PLIN1O60240 522 aa11.13□□□□□ -0.63
FNDC3A-204ENST00000492622 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
FNDC3A-204ENST00000492622 CLUAP1Q96AJ1 413 aa11.13□□□□□ -0.63
FNDC3A-204ENST00000492622 MORC1Q86VD1 984 aa11.12□□□□□ -0.63
FNDC3A-204ENST00000492622 DHX57Q6P158 1386 aaKnown RBP11.11□□□□□ -0.63
FNDC3A-204ENST00000492622 ARID3AQ99856 593 aa11.11□□□□□ -0.63
FNDC3A-204ENST00000492622 NUDCQ9Y266 331 aa11.11□□□□□ -0.63
FNDC3A-204ENST00000492622 HNRNPMP52272 730 aaKnown RBP eCLIP11.1□□□□□ -0.636e-7■■■■■ 27.4
FNDC3A-204ENST00000492622 NUP155O75694 1391 aa11.1□□□□□ -0.63
FNDC3A-204ENST00000492622 ROCK2O75116 1388 aaKnown RBP11.09□□□□□ -0.63
FNDC3A-204ENST00000492622 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
FNDC3A-204ENST00000492622 ERCC6Q03468 1493 aa11.08□□□□□ -0.64
FNDC3A-204ENST00000492622 TULP1O00294 542 aaPredicted RBP11.08□□□□□ -0.64
FNDC3A-204ENST00000492622 RRP7AQ9Y3A4 280 aaKnown RBP11.08□□□□□ -0.64
FNDC3A-204ENST00000492622 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
FNDC3A-204ENST00000492622 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
FNDC3A-204ENST00000492622 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
FNDC3A-204ENST00000492622 NAP1L2Q9ULW6 460 aaPredicted RBP11.07□□□□□ -0.64
FNDC3A-204ENST00000492622 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
FNDC3A-204ENST00000492622 BCL2L13Q9BXK5 485 aa11.06□□□□□ -0.64
FNDC3A-204ENST00000492622 OS9Q13438 667 aaPredicted RBP11.06□□□□□ -0.64
FNDC3A-204ENST00000492622 TIMELESSQ9UNS1 1208 aa11.06□□□□□ -0.64
FNDC3A-204ENST00000492622 CASC1Q6TDU7 716 aa11.06□□□□□ -0.64
FNDC3A-204ENST00000492622 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
FNDC3A-204ENST00000492622 ITPRIPQ8IWB1 547 aa11.05□□□□□ -0.64
FNDC3A-204ENST00000492622 ST20-MTHFSA0A0A6YYL1 179 aa11.05□□□□□ -0.64
FNDC3A-204ENST00000492622 HSCBQ8IWL3 235 aa11.04□□□□□ -0.64
FNDC3A-204ENST00000492622 MFAP1P55081 439 aaKnown RBP11.04□□□□□ -0.64
FNDC3A-204ENST00000492622 NUTM2FA1L443 756 aa11.03□□□□□ -0.64
FNDC3A-204ENST00000492622 EXOC6Q8TAG9 804 aa11.03□□□□□ -0.64
FNDC3A-204ENST00000492622 KCNJ4P48050 445 aa11.02□□□□□ -0.64
FNDC3A-204ENST00000492622 AMER1Q5JTC6 1135 aaPredicted RBP11.01□□□□□ -0.65
FNDC3A-204ENST00000492622 IPO9Q96P70 1041 aaKnown RBP11.01□□□□□ -0.65
FNDC3A-204ENST00000492622 NOL8Q76FK4 1167 aaKnown RBP11.01□□□□□ -0.65
FNDC3A-204ENST00000492622 FGD1P98174 961 aa11□□□□□ -0.65
FNDC3A-204ENST00000492622 ELL2O00472 640 aaPredicted RBP10.99□□□□□ -0.65
FNDC3A-204ENST00000492622 FMN1Q68DA7 1419 aa10.99□□□□□ -0.65
FNDC3A-204ENST00000492622 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
FNDC3A-204ENST00000492622 KIF3BO15066 747 aa10.99□□□□□ -0.65
FNDC3A-204ENST00000492622 FOXD4L5Q5VV16 416 aaPredicted RBP10.99□□□□□ -0.65
FNDC3A-204ENST00000492622 FOXD4L4Q8WXT5 416 aaPredicted RBP10.99□□□□□ -0.65
FNDC3A-204ENST00000492622 PANK3Q9H999 370 aa10.99□□□□□ -0.65
FNDC3A-204ENST00000492622 TRAK1Q9UPV9 953 aa10.98□□□□□ -0.65
FNDC3A-204ENST00000492622 ZRSR1Q15695 479 aaKnown RBP10.98□□□□□ -0.65
FNDC3A-204ENST00000492622 TCERG1O14776 1098 aaKnown RBP10.98□□□□□ -0.65
FNDC3A-204ENST00000492622 SMC4Q9NTJ3 1288 aa10.97□□□□□ -0.65
FNDC3A-204ENST00000492622 RALBP1Q15311 655 aa10.97□□□□□ -0.65
FNDC3A-204ENST00000492622 GOLGA2Q08379 1002 aa10.97□□□□□ -0.65
FNDC3A-204ENST00000492622 CRBNQ96SW2 442 aa10.97□□□□□ -0.65
FNDC3A-204ENST00000492622 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
FNDC3A-204ENST00000492622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.96□□□□□ -0.651e-6■■□□□ 13.5
FNDC3A-204ENST00000492622 TOP2AP11388 1531 aaKnown RBP10.96□□□□□ -0.66
FNDC3A-204ENST00000492622 ZNF644Q9H582 1327 aaPredicted RBP10.96□□□□□ -0.66
FNDC3A-204ENST00000492622 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
FNDC3A-204ENST00000492622 KANK1Q14678 1352 aa10.95□□□□□ -0.66
FNDC3A-204ENST00000492622 SLC4A10Q6U841 1118 aa10.94□□□□□ -0.66
FNDC3A-204ENST00000492622 PDE4AP27815 886 aa10.94□□□□□ -0.66
FNDC3A-204ENST00000492622 ZNF330Q9Y3S2 320 aaPredicted RBP10.94□□□□□ -0.66
FNDC3A-204ENST00000492622 FOXD4L6Q3SYB3 417 aaPredicted RBP10.94□□□□□ -0.66
FNDC3A-204ENST00000492622 FOXD4L3Q6VB84 417 aaPredicted RBP10.94□□□□□ -0.66
FNDC3A-204ENST00000492622 ANKRD30AQ9BXX3 1397 aa10.94□□□□□ -0.66
FNDC3A-204ENST00000492622 MS4A1P11836 297 aa10.93□□□□□ -0.66
FNDC3A-204ENST00000492622 COG6Q9Y2V7 657 aa10.93□□□□□ -0.66
FNDC3A-204ENST00000492622 RWDD1Q9H446 243 aaPredicted RBP10.92□□□□□ -0.66
FNDC3A-204ENST00000492622 RTF1Q92541 710 aaKnown RBP10.92□□□□□ -0.66
FNDC3A-204ENST00000492622 LTV1Q96GA3 475 aaPredicted RBP10.92□□□□□ -0.66
FNDC3A-204ENST00000492622 CENPJQ9HC77 1338 aaPredicted RBP10.91□□□□□ -0.66
FNDC3A-204ENST00000492622 MSNP26038 577 aaKnown RBP10.91□□□□□ -0.66
FNDC3A-204ENST00000492622 GOLGA6L4A6NEF3 574 aa10.91□□□□□ -0.66
FNDC3A-204ENST00000492622 APAF1O14727 1248 aa10.91□□□□□ -0.66
FNDC3A-204ENST00000492622 RRP1P56182 461 aaKnown RBP10.91□□□□□ -0.66
FNDC3A-204ENST00000492622 HDGFL2Q7Z4V5 671 aaPredicted RBP10.9□□□□□ -0.66
FNDC3A-204ENST00000492622 DRC7Q8IY82 874 aa10.89□□□□□ -0.67
FNDC3A-204ENST00000492622 L1TD1Q5T7N2 865 aaKnown RBP10.89□□□□□ -0.67
FNDC3A-204ENST00000492622 USP47Q96K76 1375 aa10.89□□□□□ -0.67
FNDC3A-204ENST00000492622 CCDC18Q5T9S5 1454 aa10.89□□□□□ -0.67
FNDC3A-204ENST00000492622 MYBBP1AQ9BQG0 1328 aaKnown RBP10.89□□□□□ -0.67
FNDC3A-204ENST00000492622 TRIM6-TRIM34B2RNG4 842 aa10.89□□□□□ -0.67
FNDC3A-204ENST00000492622 IPO8O15397 1037 aaKnown RBP10.88□□□□□ -0.67
FNDC3A-204ENST00000492622 PNNQ9H307 717 aaKnown RBP10.88□□□□□ -0.67
FNDC3A-204ENST00000492622 TRHP20396 242 aaPredicted RBP10.88□□□□□ -0.67
FNDC3A-204ENST00000492622 EFCAB2Q5VUJ9 269 aa10.88□□□□□ -0.67
FNDC3A-204ENST00000492622 CCDC9Q9Y3X0 531 aaKnown RBP10.88□□□□□ -0.67
FNDC3A-204ENST00000492622 PHLDB1Q86UU1 1377 aa10.88□□□□□ -0.67
FNDC3A-204ENST00000492622 NPHP1O15259 732 aa10.87□□□□□ -0.67
FNDC3A-204ENST00000492622 CDK11BP21127 795 aaKnown RBP10.87□□□□□ -0.67
FNDC3A-204ENST00000492622 CDCA7LQ96GN5 454 aa10.86□□□□□ -0.67
FNDC3A-204ENST00000492622 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
FNDC3A-204ENST00000492622 KIF15Q9NS87 1388 aa10.86□□□□□ -0.67
FNDC3A-204ENST00000492622 ZBED9Q6R2W3 1325 aa10.86□□□□□ -0.67
FNDC3A-204ENST00000492622 CCDC184Q52MB2 194 aa10.86□□□□□ -0.67
FNDC3A-204ENST00000492622 KIF7Q2M1P5 1343 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms