RNA–Protein interactions for RNA: ENST00000492611.5

PHACTR3-208, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2

Gene PHACTR3, Length 1,585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-208ENST00000492611 ARHGEF40Q8TER5 1519 aa16.53■□□□□ 0.24
PHACTR3-208ENST00000492611 TTC37Q6PGP7 1564 aa16.53■□□□□ 0.24
PHACTR3-208ENST00000492611 CFAP74Q9C0B2 1584 aa16.53■□□□□ 0.24
PHACTR3-208ENST00000492611 SCAPERQ9BY12 1400 aa16.51■□□□□ 0.23
PHACTR3-208ENST00000492611 YEATS2Q9ULM3 1422 aa16.51■□□□□ 0.23
PHACTR3-208ENST00000492611 CDK11AQ9UQ88 783 aaPredicted RBP16.51■□□□□ 0.23
PHACTR3-208ENST00000492611 PLCH2O75038 1416 aa16.51■□□□□ 0.23
PHACTR3-208ENST00000492611 EFCAB2Q5VUJ9 269 aa16.51■□□□□ 0.23
PHACTR3-208ENST00000492611 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
PHACTR3-208ENST00000492611 RIMS1Q86UR5 1692 aaKnown RBP16.5■□□□□ 0.23
PHACTR3-208ENST00000492611 LMTK3Q96Q04 1460 aa16.49■□□□□ 0.23
PHACTR3-208ENST00000492611 FMN1Q68DA7 1419 aa16.49■□□□□ 0.23
PHACTR3-208ENST00000492611 HSPA2P54652 639 aa16.49■□□□□ 0.23
PHACTR3-208ENST00000492611 ZFYVE16Q7Z3T8 1539 aa16.49■□□□□ 0.23
PHACTR3-208ENST00000492611 MAGI2Q86UL8 1455 aa16.49■□□□□ 0.23
PHACTR3-208ENST00000492611 ZMYM4Q5VZL5 1548 aa16.47■□□□□ 0.23
PHACTR3-208ENST00000492611 HECW1Q76N89 1606 aa16.46■□□□□ 0.23
PHACTR3-208ENST00000492611 FYCO1Q9BQS8 1478 aa16.45■□□□□ 0.22
PHACTR3-208ENST00000492611 MYT1LQ9UL68 1186 aa16.45■□□□□ 0.22
PHACTR3-208ENST00000492611 ATP10AO60312 1499 aa16.42■□□□□ 0.22
PHACTR3-208ENST00000492611 AFAP1Q8N556 730 aa16.42■□□□□ 0.22
PHACTR3-208ENST00000492611 MAP3K1Q13233 1512 aa16.41■□□□□ 0.22
PHACTR3-208ENST00000492611 SIGLEC1Q9BZZ2 1709 aa16.41■□□□□ 0.22
PHACTR3-208ENST00000492611 TROQ12816 1431 aaPredicted RBP16.4■□□□□ 0.22
PHACTR3-208ENST00000492611 CEBPAP49715 358 aaPredicted RBP16.39■□□□□ 0.21
PHACTR3-208ENST00000492611 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
PHACTR3-208ENST00000492611 CASKIN1Q8WXD9 1431 aa16.39■□□□□ 0.21
PHACTR3-208ENST00000492611 MYO5CQ9NQX4 1742 aa16.38■□□□□ 0.21
PHACTR3-208ENST00000492611 APLP2Q06481 763 aa16.38■□□□□ 0.21
PHACTR3-208ENST00000492611 ARHGAP5Q13017 1502 aa16.37■□□□□ 0.21
PHACTR3-208ENST00000492611 KIF14Q15058 1648 aa16.37■□□□□ 0.21
PHACTR3-208ENST00000492611 FER1L4A9Z1Z3 1794 aa16.36■□□□□ 0.21
PHACTR3-208ENST00000492611 ZNF518AQ6AHZ1 1483 aa16.36■□□□□ 0.21
PHACTR3-208ENST00000492611 CERKQ8TCT0 537 aa16.34■□□□□ 0.21
PHACTR3-208ENST00000492611 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
PHACTR3-208ENST00000492611 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
PHACTR3-208ENST00000492611 LRRC9Q6ZRR7 1453 aa16.33■□□□□ 0.2
PHACTR3-208ENST00000492611 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
PHACTR3-208ENST00000492611 KDM5CP41229 1560 aa16.29■□□□□ 0.2
PHACTR3-208ENST00000492611 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
PHACTR3-208ENST00000492611 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
PHACTR3-208ENST00000492611 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.2
PHACTR3-208ENST00000492611 MLH3Q9UHC1 1453 aa16.27■□□□□ 0.2
PHACTR3-208ENST00000492611 CDC42BPBQ9Y5S2 1711 aa16.27■□□□□ 0.19
PHACTR3-208ENST00000492611 SUPT6HQ7KZ85 1726 aaKnown RBP16.26■□□□□ 0.19
PHACTR3-208ENST00000492611 CCDC18Q5T9S5 1454 aa16.26■□□□□ 0.19
PHACTR3-208ENST00000492611 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
PHACTR3-208ENST00000492611 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
PHACTR3-208ENST00000492611 DIP2CQ9Y2E4 1556 aa16.25■□□□□ 0.19
PHACTR3-208ENST00000492611 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
PHACTR3-208ENST00000492611 EHBP1L1Q8N3D4 1523 aa16.24■□□□□ 0.19
PHACTR3-208ENST00000492611 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
PHACTR3-208ENST00000492611 ABCC1P33527 1531 aa16.22■□□□□ 0.19
PHACTR3-208ENST00000492611 PREX2Q70Z35 1606 aa16.22■□□□□ 0.19
PHACTR3-208ENST00000492611 ABCA6Q8N139 1617 aa16.22■□□□□ 0.19
PHACTR3-208ENST00000492611 REREQ9P2R6 1566 aa16.21■□□□□ 0.19
PHACTR3-208ENST00000492611 HRCP23327 699 aa16.21■□□□□ 0.18
PHACTR3-208ENST00000492611 HNRNPMP52272 730 aaKnown RBP eCLIP16.21■□□□□ 0.18
PHACTR3-208ENST00000492611 AGLP35573 1532 aa16.2■□□□□ 0.18
PHACTR3-208ENST00000492611 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
PHACTR3-208ENST00000492611 STRCQ7RTU9 1775 aa16.18■□□□□ 0.18
PHACTR3-208ENST00000492611 ITSN2Q9NZM3 1697 aa16.18■□□□□ 0.18
PHACTR3-208ENST00000492611 CFDP1Q9UEE9 299 aaPredicted RBP16.17■□□□□ 0.18
PHACTR3-208ENST00000492611 CDC42BPAQ5VT25 1732 aa16.17■□□□□ 0.18
PHACTR3-208ENST00000492611 KIDINS220Q9ULH0 1771 aa16.17■□□□□ 0.18
PHACTR3-208ENST00000492611 C3P01024 1663 aa16.16■□□□□ 0.18
PHACTR3-208ENST00000492611 CNTLNQ9NXG0 1405 aa16.16■□□□□ 0.18
PHACTR3-208ENST00000492611 GPATCH8Q9UKJ3 1502 aaKnown RBP16.16■□□□□ 0.18
PHACTR3-208ENST00000492611 PTPRTO14522 1441 aa16.14■□□□□ 0.17
PHACTR3-208ENST00000492611 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
PHACTR3-208ENST00000492611 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
PHACTR3-208ENST00000492611 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
PHACTR3-208ENST00000492611 MTUS2Q5JR59 1369 aa16.12■□□□□ 0.17
PHACTR3-208ENST00000492611 NCOA2Q15596 1464 aa16.12■□□□□ 0.17
PHACTR3-208ENST00000492611 SYCP2Q9BX26 1530 aa16.12■□□□□ 0.17
PHACTR3-208ENST00000492611 GGT6Q6P531 493 aa16.12■□□□□ 0.17
PHACTR3-208ENST00000492611 KIAA1107Q9UPP5 1409 aa16.1■□□□□ 0.17
PHACTR3-208ENST00000492611 PLEKHH2Q8IVE3 1493 aa16.09■□□□□ 0.17
PHACTR3-208ENST00000492611 PTPN23Q9H3S7 1636 aa16.08■□□□□ 0.17
PHACTR3-208ENST00000492611 NPATQ14207 1427 aa16.08■□□□□ 0.16
PHACTR3-208ENST00000492611 NCOA1Q15788 1441 aa16.08■□□□□ 0.16
PHACTR3-208ENST00000492611 A2MP01023 1474 aa16.07■□□□□ 0.16
PHACTR3-208ENST00000492611 ZNF644Q9H582 1327 aaPredicted RBP16.07■□□□□ 0.16
PHACTR3-208ENST00000492611 NCKAP5LQ9HCH0 1330 aa16.07■□□□□ 0.16
PHACTR3-208ENST00000492611 ATP7AQ04656 1500 aa16.07■□□□□ 0.16
PHACTR3-208ENST00000492611 FGD6Q6ZV73 1430 aa16.06■□□□□ 0.16
PHACTR3-208ENST00000492611 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
PHACTR3-208ENST00000492611 CAMSAP1Q5T5Y3 1602 aa16.04■□□□□ 0.16
PHACTR3-208ENST00000492611 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
PHACTR3-208ENST00000492611 MYOM3Q5VTT5 1437 aa16.04■□□□□ 0.16
PHACTR3-208ENST00000492611 MROH2AA6NES4 1674 aa16.03■□□□□ 0.16
PHACTR3-208ENST00000492611 LTBP4Q8N2S1 1624 aa16.03■□□□□ 0.16
PHACTR3-208ENST00000492611 PKD2Q13563 968 aa16.01■□□□□ 0.15
PHACTR3-208ENST00000492611 INO80Q9ULG1 1556 aaPredicted RBP16.01■□□□□ 0.15
PHACTR3-208ENST00000492611 CLTCQ00610 1675 aaKnown RBP16.01■□□□□ 0.15
PHACTR3-208ENST00000492611 ILDR2Q71H61 639 aa16■□□□□ 0.15
PHACTR3-208ENST00000492611 ZNF335Q9H4Z2 1342 aaPredicted RBP16■□□□□ 0.15
PHACTR3-208ENST00000492611 PTPRKQ15262 1439 aa16■□□□□ 0.15
PHACTR3-208ENST00000492611 PLXNC1O60486 1568 aa16■□□□□ 0.15
PHACTR3-208ENST00000492611 MBD5Q9P267 1494 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms