RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
ATF3-209ENST00000492118 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
ATF3-209ENST00000492118 ARHGAP5Q13017 1502 aa16.27■□□□□ 0.2
ATF3-209ENST00000492118 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.2
ATF3-209ENST00000492118 MAPKBP1O60336 1514 aa16.27■□□□□ 0.19
ATF3-209ENST00000492118 PTPN23Q9H3S7 1636 aa16.26■□□□□ 0.19
ATF3-209ENST00000492118 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
ATF3-209ENST00000492118 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
ATF3-209ENST00000492118 MYO5CQ9NQX4 1742 aa16.24■□□□□ 0.19
ATF3-209ENST00000492118 CD109Q6YHK3 1445 aa16.24■□□□□ 0.19
ATF3-209ENST00000492118 TSPOAP1O95153 1857 aa16.24■□□□□ 0.19
ATF3-209ENST00000492118 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
ATF3-209ENST00000492118 CAMSAP2Q08AD1 1489 aa16.22■□□□□ 0.19
ATF3-209ENST00000492118 PREX2Q70Z35 1606 aa16.21■□□□□ 0.19
ATF3-209ENST00000492118 EFCAB2Q5VUJ9 269 aa16.21■□□□□ 0.19
ATF3-209ENST00000492118 ABCA9Q8IUA7 1624 aa16.21■□□□□ 0.19
ATF3-209ENST00000492118 PLCH2O75038 1416 aa16.21■□□□□ 0.19
ATF3-209ENST00000492118 MIA2Q96PC5 1412 aa16.21■□□□□ 0.19
ATF3-209ENST00000492118 DIP2BQ9P265 1576 aa16.19■□□□□ 0.18
ATF3-209ENST00000492118 FANCAO15360 1455 aa16.18■□□□□ 0.18
ATF3-209ENST00000492118 SAMD9LQ8IVG5 1584 aa16.17■□□□□ 0.18
ATF3-209ENST00000492118 RRP7BPQ9NSQ0 103 aa16.17■□□□□ 0.18
ATF3-209ENST00000492118 PTPRKQ15262 1439 aa16.17■□□□□ 0.18
ATF3-209ENST00000492118 MYT1LQ9UL68 1186 aa16.16■□□□□ 0.18
ATF3-209ENST00000492118 SYCP2Q9BX26 1530 aa16.15■□□□□ 0.18
ATF3-209ENST00000492118 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
ATF3-209ENST00000492118 AFAP1Q8N556 730 aa16.15■□□□□ 0.18
ATF3-209ENST00000492118 TCOF1Q13428 1488 aaKnown RBP16.15■□□□□ 0.18
ATF3-209ENST00000492118 ARHGEF12Q9NZN5 1544 aa16.13■□□□□ 0.17
ATF3-209ENST00000492118 MAP3K4Q9Y6R4 1608 aa16.12■□□□□ 0.17
ATF3-209ENST00000492118 ABCC5O15440 1437 aa16.12■□□□□ 0.17
ATF3-209ENST00000492118 DAPK1P53355 1430 aa16.12■□□□□ 0.17
ATF3-209ENST00000492118 RAPGEF3O95398 923 aa16.12■□□□□ 0.17
ATF3-209ENST00000492118 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
ATF3-209ENST00000492118 SCAPERQ9BY12 1400 aa16.11■□□□□ 0.17
ATF3-209ENST00000492118 ADGRL1O94910 1474 aa16.11■□□□□ 0.17
ATF3-209ENST00000492118 TSPY4P0CV99 314 aa16.1■□□□□ 0.17
ATF3-209ENST00000492118 TSPY10P0CW01 314 aa16.1■□□□□ 0.17
ATF3-209ENST00000492118 TRAPPC8Q9Y2L5 1435 aa16.1■□□□□ 0.17
ATF3-209ENST00000492118 GLI2P10070 1586 aa16.1■□□□□ 0.17
ATF3-209ENST00000492118 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.17
ATF3-209ENST00000492118 MBD5Q9P267 1494 aa16.08■□□□□ 0.17
ATF3-209ENST00000492118 DNMT1P26358 1616 aaKnown RBP16.08■□□□□ 0.16
ATF3-209ENST00000492118 ABCC1P33527 1531 aa16.07■□□□□ 0.16
ATF3-209ENST00000492118 PPRC1Q5VV67 1664 aaKnown RBP16.05■□□□□ 0.16
ATF3-209ENST00000492118 ARAP3Q8WWN8 1544 aa16.05■□□□□ 0.16
ATF3-209ENST00000492118 CCDC141Q6ZP82 1450 aa16.05■□□□□ 0.16
ATF3-209ENST00000492118 C9orf84Q5VXU9 1444 aa16.05■□□□□ 0.16
ATF3-209ENST00000492118 PLEKHH2Q8IVE3 1493 aa16.04■□□□□ 0.16
ATF3-209ENST00000492118 SPAG9O60271 1321 aaKnown RBP16.03■□□□□ 0.16
ATF3-209ENST00000492118 KIAA1107Q9UPP5 1409 aa16.03■□□□□ 0.16
ATF3-209ENST00000492118 RTN4Q9NQC3 1192 aaKnown RBP16.02■□□□□ 0.16
ATF3-209ENST00000492118 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
ATF3-209ENST00000492118 CROCC2H7BZ55 1655 aa16.01■□□□□ 0.15
ATF3-209ENST00000492118 NEO1Q92859 1461 aa16■□□□□ 0.15
ATF3-209ENST00000492118 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
ATF3-209ENST00000492118 CFAP74Q9C0B2 1584 aa16■□□□□ 0.15
ATF3-209ENST00000492118 SETD5Q9C0A6 1442 aa16■□□□□ 0.15
ATF3-209ENST00000492118 RSPH4AQ5TD94 716 aa16■□□□□ 0.15
ATF3-209ENST00000492118 TEX14Q8IWB6 1497 aa16■□□□□ 0.15
ATF3-209ENST00000492118 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
ATF3-209ENST00000492118 ANKRD30AQ9BXX3 1397 aa15.99■□□□□ 0.15
ATF3-209ENST00000492118 DENND4BO75064 1496 aaPredicted RBP15.98■□□□□ 0.15
ATF3-209ENST00000492118 NAIPQ13075 1403 aa15.98■□□□□ 0.15
ATF3-209ENST00000492118 NCOA1Q15788 1441 aa15.98■□□□□ 0.15
ATF3-209ENST00000492118 KIF15Q9NS87 1388 aa15.97■□□□□ 0.15
ATF3-209ENST00000492118 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
ATF3-209ENST00000492118 POGZQ7Z3K3 1410 aa15.97■□□□□ 0.15
ATF3-209ENST00000492118 COL17A1Q9UMD9 1497 aaPredicted RBP15.97■□□□□ 0.15
ATF3-209ENST00000492118 KDM6BO15054 1643 aa15.97■□□□□ 0.15
ATF3-209ENST00000492118 ZNF518AQ6AHZ1 1483 aa15.96■□□□□ 0.15
ATF3-209ENST00000492118 HFM1A2PYH4 1435 aa15.96■□□□□ 0.15
ATF3-209ENST00000492118 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.15
ATF3-209ENST00000492118 ADGBQ8N7X0 1667 aa15.95■□□□□ 0.14
ATF3-209ENST00000492118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
ATF3-209ENST00000492118 SHANK2Q9UPX8 1470 aa15.94■□□□□ 0.14
ATF3-209ENST00000492118 ROCK1Q13464 1354 aa15.93■□□□□ 0.14
ATF3-209ENST00000492118 ATP7AQ04656 1500 aa15.92■□□□□ 0.14
ATF3-209ENST00000492118 ZFYVE16Q7Z3T8 1539 aa15.92■□□□□ 0.14
ATF3-209ENST00000492118 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
ATF3-209ENST00000492118 ANKRD50Q9ULJ7 1429 aa15.91■□□□□ 0.14
ATF3-209ENST00000492118 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
ATF3-209ENST00000492118 YEATS2Q9ULM3 1422 aa15.91■□□□□ 0.14
ATF3-209ENST00000492118 FRMPD1Q5SYB0 1578 aa15.9■□□□□ 0.14
ATF3-209ENST00000492118 KIDINS220Q9ULH0 1771 aa15.89■□□□□ 0.14
ATF3-209ENST00000492118 ARXQ96QS3 562 aa15.89■□□□□ 0.13
ATF3-209ENST00000492118 GCC2Q8IWJ2 1684 aa15.89■□□□□ 0.13
ATF3-209ENST00000492118 INO80Q9ULG1 1556 aaPredicted RBP15.88■□□□□ 0.13
ATF3-209ENST00000492118 KDM5CP41229 1560 aa15.87■□□□□ 0.13
ATF3-209ENST00000492118 HECW2Q9P2P5 1572 aa15.87■□□□□ 0.13
ATF3-209ENST00000492118 MAST1Q9Y2H9 1570 aa15.87■□□□□ 0.13
ATF3-209ENST00000492118 KIF3BO15066 747 aa15.87■□□□□ 0.13
ATF3-209ENST00000492118 FOXD1Q16676 465 aa15.86■□□□□ 0.13
ATF3-209ENST00000492118 RTEL1-TNFRSF6BF6WH68 1400 aa15.86■□□□□ 0.13
ATF3-209ENST00000492118 PLXNC1O60486 1568 aa15.84■□□□□ 0.13
ATF3-209ENST00000492118 ABCA6Q8N139 1617 aa15.84■□□□□ 0.13
ATF3-209ENST00000492118 GGT6Q6P531 493 aa15.84■□□□□ 0.13
ATF3-209ENST00000492118 MLH3Q9UHC1 1453 aa15.84■□□□□ 0.13
ATF3-209ENST00000492118 MLECQ14165 292 aa15.83■□□□□ 0.13
ATF3-209ENST00000492118 NUP155O75694 1391 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms