RNA–Protein interactions for RNA: ENST00000491907.5

CCNB3-207, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 310 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-207ENST00000491907 ZRANB1Q9UGI0 708 aa18.6■□□□□ 0.57
CCNB3-207ENST00000491907 NEO1Q92859 1461 aa18.59■□□□□ 0.57
CCNB3-207ENST00000491907 CPS1P31327 1500 aa18.55■□□□□ 0.56
CCNB3-207ENST00000491907 RICTORQ6R327 1708 aa18.54■□□□□ 0.56
CCNB3-207ENST00000491907 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.56
CCNB3-207ENST00000491907 ZFYVE16Q7Z3T8 1539 aa18.52■□□□□ 0.56
CCNB3-207ENST00000491907 C3P01024 1663 aa18.5■□□□□ 0.55
CCNB3-207ENST00000491907 TRAPPC8Q9Y2L5 1435 aa18.5■□□□□ 0.55
CCNB3-207ENST00000491907 PKD2Q13563 968 aa18.5■□□□□ 0.55
CCNB3-207ENST00000491907 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
CCNB3-207ENST00000491907 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
CCNB3-207ENST00000491907 YY1P25490 414 aa18.48■□□□□ 0.55
CCNB3-207ENST00000491907 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
CCNB3-207ENST00000491907 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.55
CCNB3-207ENST00000491907 SENP3-EIF4A1A0A087X0R7 540 aa18.46■□□□□ 0.55
CCNB3-207ENST00000491907 ABCA9Q8IUA7 1624 aa18.45■□□□□ 0.54
CCNB3-207ENST00000491907 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
CCNB3-207ENST00000491907 SHANK2Q9UPX8 1470 aa18.44■□□□□ 0.54
CCNB3-207ENST00000491907 TCOF1Q13428 1488 aaKnown RBP18.42■□□□□ 0.54
CCNB3-207ENST00000491907 FOXD1Q16676 465 aa18.42■□□□□ 0.54
CCNB3-207ENST00000491907 ZMYM4Q5VZL5 1548 aa18.42■□□□□ 0.54
CCNB3-207ENST00000491907 PLA2R1Q13018 1463 aa18.39■□□□□ 0.53
CCNB3-207ENST00000491907 SLC34A2O95436 690 aa18.37■□□□□ 0.53
CCNB3-207ENST00000491907 RAPGEF2Q9Y4G8 1499 aa18.36■□□□□ 0.53
CCNB3-207ENST00000491907 MAGI2Q86UL8 1455 aa18.35■□□□□ 0.53
CCNB3-207ENST00000491907 LRP5O75197 1615 aa18.34■□□□□ 0.53
CCNB3-207ENST00000491907 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
CCNB3-207ENST00000491907 RXRBP28702 533 aa18.31■□□□□ 0.52
CCNB3-207ENST00000491907 ATP10AO60312 1499 aa18.31■□□□□ 0.52
CCNB3-207ENST00000491907 HECW1Q76N89 1606 aa18.3■□□□□ 0.52
CCNB3-207ENST00000491907 ZNF772Q68DY9 489 aaPredicted RBP18.29■□□□□ 0.52
CCNB3-207ENST00000491907 C9orf84Q5VXU9 1444 aa18.29■□□□□ 0.52
CCNB3-207ENST00000491907 SUPT6HQ7KZ85 1726 aaKnown RBP18.29■□□□□ 0.52
CCNB3-207ENST00000491907 CDK12Q9NYV4 1490 aaPredicted RBP18.28■□□□□ 0.52
CCNB3-207ENST00000491907 RAPGEF6Q8TEU7 1601 aa18.27■□□□□ 0.52
CCNB3-207ENST00000491907 RNF17Q9BXT8 1623 aaKnown RBP18.26■□□□□ 0.51
CCNB3-207ENST00000491907 VWDEQ8N2E2 1590 aa18.23■□□□□ 0.51
CCNB3-207ENST00000491907 BIVM-ERCC5R4GMW8 1640 aa18.23■□□□□ 0.51
CCNB3-207ENST00000491907 ABCA8O94911 1581 aa18.21■□□□□ 0.51
CCNB3-207ENST00000491907 ZNF142P52746 1687 aaPredicted RBP18.18■□□□□ 0.5
CCNB3-207ENST00000491907 ARID3CA6NKF2 412 aa18.18■□□□□ 0.5
CCNB3-207ENST00000491907 NPATQ14207 1427 aa18.17■□□□□ 0.5
CCNB3-207ENST00000491907 NUTM2BA6NNL0 878 aaPredicted RBP18.17■□□□□ 0.5
CCNB3-207ENST00000491907 NUTM2EB1AL46 878 aaPredicted RBP18.17■□□□□ 0.5
CCNB3-207ENST00000491907 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
CCNB3-207ENST00000491907 NUTM2AQ8IVF1 878 aaPredicted RBP18.17■□□□□ 0.5
CCNB3-207ENST00000491907 ESF1Q9H501 851 aaKnown RBP18.17■□□□□ 0.5
CCNB3-207ENST00000491907 IGF1RP08069 1367 aa18.17■□□□□ 0.5
CCNB3-207ENST00000491907 PCDH10Q9P2E7 1040 aa18.16■□□□□ 0.5
CCNB3-207ENST00000491907 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
CCNB3-207ENST00000491907 UGGT2Q9NYU1 1516 aa18.13■□□□□ 0.49
CCNB3-207ENST00000491907 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
CCNB3-207ENST00000491907 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
CCNB3-207ENST00000491907 RGS12O14924 1447 aa18.13■□□□□ 0.49
CCNB3-207ENST00000491907 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
CCNB3-207ENST00000491907 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
CCNB3-207ENST00000491907 LRP6O75581 1613 aa18.1■□□□□ 0.49
CCNB3-207ENST00000491907 C1QTNF8P60827 252 aa18.09■□□□□ 0.49
CCNB3-207ENST00000491907 ATP10BO94823 1461 aa18.08■□□□□ 0.49
CCNB3-207ENST00000491907 MEX3CQ5U5Q3 659 aaKnown RBP18.08■□□□□ 0.48
CCNB3-207ENST00000491907 POLR1AO95602 1720 aaPredicted RBP18.08■□□□□ 0.48
CCNB3-207ENST00000491907 CEP350Q5VT06 3117 aa18.07■□□□□ 0.48
CCNB3-207ENST00000491907 CFAP74Q9C0B2 1584 aa18.07■□□□□ 0.48
CCNB3-207ENST00000491907 ATAD2Q6PL18 1390 aa18.05■□□□□ 0.48
CCNB3-207ENST00000491907 JCADQ9P266 1359 aa18.04■□□□□ 0.48
CCNB3-207ENST00000491907 CNTLNQ9NXG0 1405 aa18.03■□□□□ 0.48
CCNB3-207ENST00000491907 SYNMO15061 1565 aa18.01■□□□□ 0.47
CCNB3-207ENST00000491907 AGLP35573 1532 aa18.01■□□□□ 0.47
CCNB3-207ENST00000491907 ROBO1Q9Y6N7 1651 aa17.99■□□□□ 0.47
CCNB3-207ENST00000491907 CDK13Q14004 1512 aaKnown RBP17.99■□□□□ 0.47
CCNB3-207ENST00000491907 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.99■□□□□ 0.47
CCNB3-207ENST00000491907 SCAPERQ9BY12 1400 aa17.98■□□□□ 0.47
CCNB3-207ENST00000491907 NHSL1Q5SYE7 1610 aa17.98■□□□□ 0.47
CCNB3-207ENST00000491907 ZMYM3Q14202 1370 aa17.98■□□□□ 0.47
CCNB3-207ENST00000491907 ZNF784Q8NCA9 323 aaPredicted RBP17.97■□□□□ 0.47
CCNB3-207ENST00000491907 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
CCNB3-207ENST00000491907 DNMT1P26358 1616 aaKnown RBP17.95■□□□□ 0.46
CCNB3-207ENST00000491907 MROH2AA6NES4 1674 aa17.94■□□□□ 0.46
CCNB3-207ENST00000491907 EP400Q96L91 3159 aa17.93■□□□□ 0.46
CCNB3-207ENST00000491907 XIRP1Q702N8 1843 aaKnown RBP17.93■□□□□ 0.46
CCNB3-207ENST00000491907 HRCP23327 699 aa17.92■□□□□ 0.46
CCNB3-207ENST00000491907 RBM6P78332 1123 aaKnown RBP17.91■□□□□ 0.46
CCNB3-207ENST00000491907 PHLPP1O60346 1717 aa17.91■□□□□ 0.46
CCNB3-207ENST00000491907 SPATA31A6Q5VVP1 1343 aa17.91■□□□□ 0.46
CCNB3-207ENST00000491907 CCDC125Q86Z20 511 aa17.9■□□□□ 0.46
CCNB3-207ENST00000491907 REREQ9P2R6 1566 aa17.9■□□□□ 0.46
CCNB3-207ENST00000491907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCNB3-207ENST00000491907 DIP2CQ9Y2E4 1556 aa17.89■□□□□ 0.45
CCNB3-207ENST00000491907 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
CCNB3-207ENST00000491907 AFF2P51816 1311 aa17.88■□□□□ 0.45
CCNB3-207ENST00000491907 PSDA5PKW4 1024 aaPredicted RBP17.87■□□□□ 0.45
CCNB3-207ENST00000491907 NPHP4O75161 1426 aaPredicted RBP17.87■□□□□ 0.45
CCNB3-207ENST00000491907 CAPN15O75808 1086 aa17.86■□□□□ 0.45
CCNB3-207ENST00000491907 ANKLE2Q86XL3 938 aa17.86■□□□□ 0.45
CCNB3-207ENST00000491907 QTRT2Q9H974 415 aaKnown RBP17.85■□□□□ 0.45
CCNB3-207ENST00000491907 MED14O60244 1454 aa17.82■□□□□ 0.44
CCNB3-207ENST00000491907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
CCNB3-207ENST00000491907 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
CCNB3-207ENST00000491907 MYT1LQ9UL68 1186 aa17.8■□□□□ 0.44
CCNB3-207ENST00000491907 BCL9LQ86UU0 1499 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms