RNA–Protein interactions for RNA: ENST00000491789.1

VPS45-209, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 976 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-209ENST00000491789 UGGT2Q9NYU1 1516 aa11.51□□□□□ -0.57
VPS45-209ENST00000491789 PPRC1Q5VV67 1664 aaKnown RBP11.51□□□□□ -0.57
VPS45-209ENST00000491789 CTTNBP2Q8WZ74 1663 aa11.5□□□□□ -0.57
VPS45-209ENST00000491789 TRIM26Q12899 539 aaPredicted RBP11.5□□□□□ -0.57
VPS45-209ENST00000491789 UACAQ9BZF9 1416 aa11.5□□□□□ -0.57
VPS45-209ENST00000491789 UHRF1BP1LA0JNW5 1464 aa11.5□□□□□ -0.57
VPS45-209ENST00000491789 KDM6BO15054 1643 aa11.49□□□□□ -0.57
VPS45-209ENST00000491789 ASXL2Q76L83 1435 aa11.49□□□□□ -0.57
VPS45-209ENST00000491789 PRXQ9BXM0 1461 aa11.49□□□□□ -0.57
VPS45-209ENST00000491789 KIAA0556O60303 1618 aa11.49□□□□□ -0.57
VPS45-209ENST00000491789 GLI2P10070 1586 aa11.47□□□□□ -0.57
VPS45-209ENST00000491789 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
VPS45-209ENST00000491789 ZCCHC11Q5TAX3 1644 aaKnown RBP11.46□□□□□ -0.57
VPS45-209ENST00000491789 KDM5BQ9UGL1 1544 aa11.46□□□□□ -0.57
VPS45-209ENST00000491789 PLB1Q6P1J6 1458 aa11.45□□□□□ -0.58
VPS45-209ENST00000491789 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
VPS45-209ENST00000491789 UBTFP17480 764 aaKnown RBP11.44□□□□□ -0.58
VPS45-209ENST00000491789 MAP3K4Q9Y6R4 1608 aa11.43□□□□□ -0.58
VPS45-209ENST00000491789 EPRSP07814 1512 aaKnown RBP11.43□□□□□ -0.58
VPS45-209ENST00000491789 COL17A1Q9UMD9 1497 aaPredicted RBP11.42□□□□□ -0.58
VPS45-209ENST00000491789 PCGF6Q9BYE7 350 aa11.41□□□□□ -0.58
VPS45-209ENST00000491789 CLIP1P30622 1438 aa11.41□□□□□ -0.58
VPS45-209ENST00000491789 ABCA8O94911 1581 aa11.4□□□□□ -0.58
VPS45-209ENST00000491789 VPS8Q8N3P4 1428 aa11.36□□□□□ -0.59
VPS45-209ENST00000491789 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
VPS45-209ENST00000491789 CLCN6P51797 869 aa11.36□□□□□ -0.59
VPS45-209ENST00000491789 P3H3Q8IVL6 736 aa11.36□□□□□ -0.59
VPS45-209ENST00000491789 WDR7Q9Y4E6 1490 aa11.36□□□□□ -0.59
VPS45-209ENST00000491789 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
VPS45-209ENST00000491789 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
VPS45-209ENST00000491789 CFAP43Q8NDM7 1665 aa11.33□□□□□ -0.6
VPS45-209ENST00000491789 FARP1Q9Y4F1 1045 aaPredicted RBP11.33□□□□□ -0.6
VPS45-209ENST00000491789 HRCP23327 699 aa11.32□□□□□ -0.6
VPS45-209ENST00000491789 ATP10BO94823 1461 aa11.32□□□□□ -0.6
VPS45-209ENST00000491789 TEX14Q8IWB6 1497 aa11.32□□□□□ -0.6
VPS45-209ENST00000491789 SAMD9Q5K651 1589 aa11.31□□□□□ -0.6
VPS45-209ENST00000491789 CD109Q6YHK3 1445 aa11.3□□□□□ -0.6
VPS45-209ENST00000491789 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
VPS45-209ENST00000491789 FKBP8Q14318 412 aa11.3□□□□□ -0.6
VPS45-209ENST00000491789 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
VPS45-209ENST00000491789 MAGI3Q5TCQ9 1506 aa11.3□□□□□ -0.6
VPS45-209ENST00000491789 ADGRL1O94910 1474 aa11.28□□□□□ -0.6
VPS45-209ENST00000491789 PROM2Q8N271 834 aa11.27□□□□□ -0.61
VPS45-209ENST00000491789 CREBZFQ9NS37 354 aa11.27□□□□□ -0.61
VPS45-209ENST00000491789 RAPGEF6Q8TEU7 1601 aa11.26□□□□□ -0.61
VPS45-209ENST00000491789 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
VPS45-209ENST00000491789 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
VPS45-209ENST00000491789 ZEB1P37275 1124 aaPredicted RBP11.25□□□□□ -0.61
VPS45-209ENST00000491789 RANGAP1P46060 587 aaPredicted RBP11.25□□□□□ -0.61
VPS45-209ENST00000491789 ABCA9Q8IUA7 1624 aa11.24□□□□□ -0.61
VPS45-209ENST00000491789 MAP3K1Q13233 1512 aa11.21□□□□□ -0.61
VPS45-209ENST00000491789 ARAP3Q8WWN8 1544 aa11.21□□□□□ -0.61
VPS45-209ENST00000491789 NUP153P49790 1475 aaKnown RBP11.21□□□□□ -0.61
VPS45-209ENST00000491789 ARHGAP35Q9NRY4 1499 aa11.21□□□□□ -0.61
VPS45-209ENST00000491789 FHOD3Q2V2M9 1422 aa11.21□□□□□ -0.61
VPS45-209ENST00000491789 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
VPS45-209ENST00000491789 RAPGEF3O95398 923 aa11.17□□□□□ -0.62
VPS45-209ENST00000491789 MIER1Q8N108 512 aa11.16□□□□□ -0.62
VPS45-209ENST00000491789 PLEKHD1A6NEE1 506 aa11.15□□□□□ -0.62
VPS45-209ENST00000491789 FRMPD1Q5SYB0 1578 aa11.15□□□□□ -0.62
VPS45-209ENST00000491789 HECW2Q9P2P5 1572 aa11.15□□□□□ -0.62
VPS45-209ENST00000491789 PHLDB1Q86UU1 1377 aa11.15□□□□□ -0.63
VPS45-209ENST00000491789 NEO1Q92859 1461 aa11.14□□□□□ -0.63
VPS45-209ENST00000491789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.63
VPS45-209ENST00000491789 RICTORQ6R327 1708 aa11.13□□□□□ -0.63
VPS45-209ENST00000491789 POTEMA6NI47 508 aa11.13□□□□□ -0.63
VPS45-209ENST00000491789 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
VPS45-209ENST00000491789 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
VPS45-209ENST00000491789 ADAMTSL3P82987 1691 aa11.13□□□□□ -0.63
VPS45-209ENST00000491789 CDK13Q14004 1512 aaKnown RBP11.12□□□□□ -0.63
VPS45-209ENST00000491789 LRRIQ1Q96JM4 1722 aa11.12□□□□□ -0.63
VPS45-209ENST00000491789 FYCO1Q9BQS8 1478 aa11.12□□□□□ -0.63
VPS45-209ENST00000491789 FMN1Q68DA7 1419 aa11.11□□□□□ -0.63
VPS45-209ENST00000491789 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
VPS45-209ENST00000491789 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
VPS45-209ENST00000491789 BCORL1Q5H9F3 1711 aa11.1□□□□□ -0.63
VPS45-209ENST00000491789 TIAM1Q13009 1591 aa11.1□□□□□ -0.63
VPS45-209ENST00000491789 AKNAQ7Z591 1439 aa11.09□□□□□ -0.63
VPS45-209ENST00000491789 SIGLEC1Q9BZZ2 1709 aa11.09□□□□□ -0.63
VPS45-209ENST00000491789 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
VPS45-209ENST00000491789 ILDR1Q86SU0 546 aaPredicted RBP11.08□□□□□ -0.64
VPS45-209ENST00000491789 PPARGC1BQ86YN6 1023 aaKnown RBP11.08□□□□□ -0.64
VPS45-209ENST00000491789 FBXO3Q9UK99 471 aa11.08□□□□□ -0.64
VPS45-209ENST00000491789 CASKIN1Q8WXD9 1431 aa11.08□□□□□ -0.64
VPS45-209ENST00000491789 FANCAO15360 1455 aa11.07□□□□□ -0.64
VPS45-209ENST00000491789 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
VPS45-209ENST00000491789 PCF11O94913 1555 aaKnown RBP11.07□□□□□ -0.64
VPS45-209ENST00000491789 DENND4BO75064 1496 aaPredicted RBP11.06□□□□□ -0.64
VPS45-209ENST00000491789 PTPRMP28827 1452 aa11.06□□□□□ -0.64
VPS45-209ENST00000491789 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
VPS45-209ENST00000491789 MADDQ8WXG6 1647 aa11.06□□□□□ -0.64
VPS45-209ENST00000491789 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
VPS45-209ENST00000491789 CFAP74Q9C0B2 1584 aa11.05□□□□□ -0.64
VPS45-209ENST00000491789 RRBP1Q9P2E9 1410 aaKnown RBP11.05□□□□□ -0.64
VPS45-209ENST00000491789 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
VPS45-209ENST00000491789 MYO5CQ9NQX4 1742 aa11.04□□□□□ -0.64
VPS45-209ENST00000491789 PLCH2O75038 1416 aa11.04□□□□□ -0.64
VPS45-209ENST00000491789 KIF14Q15058 1648 aa11.04□□□□□ -0.64
VPS45-209ENST00000491789 HECW1Q76N89 1606 aa11.04□□□□□ -0.64
VPS45-209ENST00000491789 YEATS2Q9ULM3 1422 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms