RNA–Protein interactions for RNA: ENST00000491770.1

UBE2D4-211, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-211ENST00000491770 GLI2P10070 1586 aa8.38□□□□□ -1.07
UBE2D4-211ENST00000491770 EFCAB5A4FU69 1503 aa8.38□□□□□ -1.07
UBE2D4-211ENST00000491770 MAP3K4Q9Y6R4 1608 aa8.37□□□□□ -1.07
UBE2D4-211ENST00000491770 SAMD9Q5K651 1589 aa8.37□□□□□ -1.07
UBE2D4-211ENST00000491770 KDM5BQ9UGL1 1544 aa8.37□□□□□ -1.07
UBE2D4-211ENST00000491770 ABCA8O94911 1581 aa8.36□□□□□ -1.07
UBE2D4-211ENST00000491770 ARID3CA6NKF2 412 aa8.36□□□□□ -1.07
UBE2D4-211ENST00000491770 P3H3Q8IVL6 736 aa8.36□□□□□ -1.07
UBE2D4-211ENST00000491770 STAG3Q9UJ98 1225 aa8.36□□□□□ -1.07
UBE2D4-211ENST00000491770 EPRSP07814 1512 aaKnown RBP8.35□□□□□ -1.07
UBE2D4-211ENST00000491770 UBTFP17480 764 aaKnown RBP8.35□□□□□ -1.07
UBE2D4-211ENST00000491770 HECW1Q76N89 1606 aa8.34□□□□□ -1.07
UBE2D4-211ENST00000491770 RBM42Q9BTD8 480 aaKnown RBP8.34□□□□□ -1.07
UBE2D4-211ENST00000491770 CFAP74Q9C0B2 1584 aa8.34□□□□□ -1.07
UBE2D4-211ENST00000491770 FHOD3Q2V2M9 1422 aa8.33□□□□□ -1.08
UBE2D4-211ENST00000491770 PPRC1Q5VV67 1664 aaKnown RBP8.33□□□□□ -1.08
UBE2D4-211ENST00000491770 AKT1S1Q96B36 256 aa8.32□□□□□ -1.08
UBE2D4-211ENST00000491770 KCNH8Q96L42 1107 aa8.32□□□□□ -1.08
UBE2D4-211ENST00000491770 ATP1B4Q9UN42 357 aaPredicted RBP8.32□□□□□ -1.08
UBE2D4-211ENST00000491770 CD109Q6YHK3 1445 aa8.3□□□□□ -1.08
UBE2D4-211ENST00000491770 ABCA9Q8IUA7 1624 aa8.28□□□□□ -1.08
UBE2D4-211ENST00000491770 FMN1Q68DA7 1419 aa8.28□□□□□ -1.08
UBE2D4-211ENST00000491770 KIF14Q15058 1648 aa8.27□□□□□ -1.09
UBE2D4-211ENST00000491770 MAGI3Q5TCQ9 1506 aa8.27□□□□□ -1.09
UBE2D4-211ENST00000491770 CLIP1P30622 1438 aa8.27□□□□□ -1.09
UBE2D4-211ENST00000491770 MYO5CQ9NQX4 1742 aa8.26□□□□□ -1.09
UBE2D4-211ENST00000491770 REM2Q8IYK8 340 aaPredicted RBP8.26□□□□□ -1.09
UBE2D4-211ENST00000491770 ADGRL1O94910 1474 aa8.26□□□□□ -1.09
UBE2D4-211ENST00000491770 MIER1Q8N108 512 aa8.25□□□□□ -1.09
UBE2D4-211ENST00000491770 NUP153P49790 1475 aaKnown RBP8.25□□□□□ -1.09
UBE2D4-211ENST00000491770 PLEKHD1A6NEE1 506 aa8.24□□□□□ -1.09
UBE2D4-211ENST00000491770 PLCD3Q8N3E9 789 aa8.24□□□□□ -1.09
UBE2D4-211ENST00000491770 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
UBE2D4-211ENST00000491770 CDK13Q14004 1512 aaKnown RBP8.24□□□□□ -1.09
UBE2D4-211ENST00000491770 PCF11O94913 1555 aaKnown RBP8.23□□□□□ -1.09
UBE2D4-211ENST00000491770 SPDYE1Q8NFV5 336 aaPredicted RBP8.23□□□□□ -1.09
UBE2D4-211ENST00000491770 MYT1LQ9UL68 1186 aa8.23□□□□□ -1.09
UBE2D4-211ENST00000491770 ATP10BO94823 1461 aa8.23□□□□□ -1.09
UBE2D4-211ENST00000491770 CCDC18Q5T9S5 1454 aa8.22□□□□□ -1.09
UBE2D4-211ENST00000491770 NEO1Q92859 1461 aa8.22□□□□□ -1.09
UBE2D4-211ENST00000491770 SPOCK2Q92563 424 aa8.22□□□□□ -1.09
UBE2D4-211ENST00000491770 ARID4BQ4LE39 1312 aaPredicted RBP8.22□□□□□ -1.09
UBE2D4-211ENST00000491770 TTC37Q6PGP7 1564 aa8.22□□□□□ -1.09
UBE2D4-211ENST00000491770 PKD2Q13563 968 aa8.21□□□□□ -1.1
UBE2D4-211ENST00000491770 KLHL34Q8N239 644 aa8.21□□□□□ -1.1
UBE2D4-211ENST00000491770 PHLDB1Q86UU1 1377 aa8.21□□□□□ -1.1
UBE2D4-211ENST00000491770 FANCAO15360 1455 aa8.2□□□□□ -1.1
UBE2D4-211ENST00000491770 ARHGAP5Q13017 1502 aa8.2□□□□□ -1.1
UBE2D4-211ENST00000491770 ARHGEF40Q8TER5 1519 aa8.2□□□□□ -1.1
UBE2D4-211ENST00000491770 ARHGAP35Q9NRY4 1499 aa8.19□□□□□ -1.1
UBE2D4-211ENST00000491770 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
UBE2D4-211ENST00000491770 POGZQ7Z3K3 1410 aa8.18□□□□□ -1.1
UBE2D4-211ENST00000491770 ZFYVE16Q7Z3T8 1539 aa8.18□□□□□ -1.1
UBE2D4-211ENST00000491770 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.18□□□□□ -1.1
UBE2D4-211ENST00000491770 ARAP3Q8WWN8 1544 aa8.18□□□□□ -1.1
UBE2D4-211ENST00000491770 PITPNM1O00562 1244 aa8.17□□□□□ -1.1
UBE2D4-211ENST00000491770 CLEC11AQ9Y240 323 aa8.17□□□□□ -1.1
UBE2D4-211ENST00000491770 FYCO1Q9BQS8 1478 aa8.17□□□□□ -1.1
UBE2D4-211ENST00000491770 RICTORQ6R327 1708 aa8.17□□□□□ -1.1
UBE2D4-211ENST00000491770 AKNAQ7Z591 1439 aa8.16□□□□□ -1.1
UBE2D4-211ENST00000491770 RIMS1Q86UR5 1692 aaKnown RBP8.16□□□□□ -1.1
UBE2D4-211ENST00000491770 ITSN2Q9NZM3 1697 aa8.15□□□□□ -1.1
UBE2D4-211ENST00000491770 PREX2Q70Z35 1606 aa8.15□□□□□ -1.1
UBE2D4-211ENST00000491770 TROQ12816 1431 aaPredicted RBP8.15□□□□□ -1.1
UBE2D4-211ENST00000491770 CREBZFQ9NS37 354 aa8.15□□□□□ -1.1
UBE2D4-211ENST00000491770 FER1L4A9Z1Z3 1794 aa8.15□□□□□ -1.11
UBE2D4-211ENST00000491770 FRMPD1Q5SYB0 1578 aa8.14□□□□□ -1.11
UBE2D4-211ENST00000491770 COL17A1Q9UMD9 1497 aaPredicted RBP8.14□□□□□ -1.11
UBE2D4-211ENST00000491770 PRR29P0C7W0 189 aa8.14□□□□□ -1.11
UBE2D4-211ENST00000491770 LRRIQ1Q96JM4 1722 aa8.14□□□□□ -1.11
UBE2D4-211ENST00000491770 MADDQ8WXG6 1647 aa8.14□□□□□ -1.11
UBE2D4-211ENST00000491770 HECW2Q9P2P5 1572 aa8.14□□□□□ -1.11
UBE2D4-211ENST00000491770 BCORL1Q5H9F3 1711 aa8.13□□□□□ -1.11
UBE2D4-211ENST00000491770 MNX1P50219 401 aaPredicted RBP8.13□□□□□ -1.11
UBE2D4-211ENST00000491770 ZMYM4Q5VZL5 1548 aa8.13□□□□□ -1.11
UBE2D4-211ENST00000491770 ZNF518AQ6AHZ1 1483 aa8.13□□□□□ -1.11
UBE2D4-211ENST00000491770 CASKIN1Q8WXD9 1431 aa8.12□□□□□ -1.11
UBE2D4-211ENST00000491770 MTUS2Q5JR59 1369 aa8.12□□□□□ -1.11
UBE2D4-211ENST00000491770 PLEKHG5O94827 1062 aa8.12□□□□□ -1.11
UBE2D4-211ENST00000491770 ZBTB47Q9UFB7 747 aaPredicted RBP8.12□□□□□ -1.11
UBE2D4-211ENST00000491770 EHBP1L1Q8N3D4 1523 aa8.12□□□□□ -1.11
UBE2D4-211ENST00000491770 KDM4FA0A1W2PPD8 638 aa8.11□□□□□ -1.11
UBE2D4-211ENST00000491770 RAPGEF3O95398 923 aa8.11□□□□□ -1.11
UBE2D4-211ENST00000491770 EFCAB2Q5VUJ9 269 aa8.11□□□□□ -1.11
UBE2D4-211ENST00000491770 ESF1Q9H501 851 aaKnown RBP8.11□□□□□ -1.11
UBE2D4-211ENST00000491770 SCAPERQ9BY12 1400 aa8.11□□□□□ -1.11
UBE2D4-211ENST00000491770 CDC42BPAQ5VT25 1732 aa8.1□□□□□ -1.11
UBE2D4-211ENST00000491770 MAGI2Q86UL8 1455 aa8.1□□□□□ -1.11
UBE2D4-211ENST00000491770 CEP162Q5TB80 1403 aa8.1□□□□□ -1.11
UBE2D4-211ENST00000491770 C9orf84Q5VXU9 1444 aa8.1□□□□□ -1.11
UBE2D4-211ENST00000491770 ZNF777Q9ULD5 760 aaPredicted RBP8.09□□□□□ -1.11
UBE2D4-211ENST00000491770 PLCH2O75038 1416 aa8.09□□□□□ -1.11
UBE2D4-211ENST00000491770 SUPT6HQ7KZ85 1726 aaKnown RBP8.09□□□□□ -1.11
UBE2D4-211ENST00000491770 CDC42BPBQ9Y5S2 1711 aa8.09□□□□□ -1.11
UBE2D4-211ENST00000491770 ABCC1P33527 1531 aa8.08□□□□□ -1.12
UBE2D4-211ENST00000491770 ADAMTSL3P82987 1691 aa8.08□□□□□ -1.12
UBE2D4-211ENST00000491770 NUBP1P53384 320 aa8.08□□□□□ -1.12
UBE2D4-211ENST00000491770 MLECQ14165 292 aa8.08□□□□□ -1.12
UBE2D4-211ENST00000491770 CCNB3Q8WWL7 1395 aa8.08□□□□□ -1.12
UBE2D4-211ENST00000491770 SYCP2Q9BX26 1530 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms