RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 SCAPERQ9BY12 1400 aa21.46■■□□□ 1.03
DNMT3A-214ENST00000491288 MADDQ8WXG6 1647 aa21.46■■□□□ 1.03
DNMT3A-214ENST00000491288 EFCAB2Q5VUJ9 269 aa21.44■■□□□ 1.02
DNMT3A-214ENST00000491288 CASKIN1Q8WXD9 1431 aa21.44■■□□□ 1.02
DNMT3A-214ENST00000491288 ZFYVE16Q7Z3T8 1539 aa21.44■■□□□ 1.02
DNMT3A-214ENST00000491288 TROQ12816 1431 aaPredicted RBP21.43■■□□□ 1.02
DNMT3A-214ENST00000491288 LMTK3Q96Q04 1460 aa21.41■■□□□ 1.02
DNMT3A-214ENST00000491288 PCF11O94913 1555 aaKnown RBP21.4■■□□□ 1.02
DNMT3A-214ENST00000491288 SIGLEC1Q9BZZ2 1709 aa21.38■■□□□ 1.01
DNMT3A-214ENST00000491288 FYCO1Q9BQS8 1478 aa21.38■■□□□ 1.01
DNMT3A-214ENST00000491288 ATP10AO60312 1499 aa21.36■■□□□ 1.01
DNMT3A-214ENST00000491288 KIF14Q15058 1648 aa21.36■■□□□ 1.01
DNMT3A-214ENST00000491288 CCDC18Q5T9S5 1454 aa21.35■■□□□ 1.01
DNMT3A-214ENST00000491288 ZNF518AQ6AHZ1 1483 aa21.33■■□□□ 1.01
DNMT3A-214ENST00000491288 C9orf84Q5VXU9 1444 aa21.32■■□□□ 1
DNMT3A-214ENST00000491288 RIMS1Q86UR5 1692 aaKnown RBP21.32■■□□□ 1
DNMT3A-214ENST00000491288 MYO5CQ9NQX4 1742 aa21.32■■□□□ 1
DNMT3A-214ENST00000491288 KDM5CP41229 1560 aa21.31■■□□□ 1
DNMT3A-214ENST00000491288 ARHGEF12Q9NZN5 1544 aa21.31■■□□□ 1
DNMT3A-214ENST00000491288 AFAP1Q8N556 730 aa21.31■■□□□ 1
DNMT3A-214ENST00000491288 ARHGAP5Q13017 1502 aa21.29■■□□□ 1
DNMT3A-214ENST00000491288 VPS8Q8N3P4 1428 aa21.29■■□□□ 1
DNMT3A-214ENST00000491288 APLP2Q06481 763 aa21.28■■□□□ 1
DNMT3A-214ENST00000491288 FBXO41Q8TF61 875 aa21.28■■□□□ 1
DNMT3A-214ENST00000491288 LRRIQ1Q96JM4 1722 aa21.28■■□□□ 1
DNMT3A-214ENST00000491288 MLECQ14165 292 aa21.27■■□□□ 1
DNMT3A-214ENST00000491288 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
DNMT3A-214ENST00000491288 HSPA2P54652 639 aa21.24■□□□□ 0.99
DNMT3A-214ENST00000491288 REREQ9P2R6 1566 aa21.23■□□□□ 0.99
DNMT3A-214ENST00000491288 MTUS2Q5JR59 1369 aa21.23■□□□□ 0.99
DNMT3A-214ENST00000491288 TRAPPC8Q9Y2L5 1435 aa21.21■□□□□ 0.99
DNMT3A-214ENST00000491288 CDC42BPBQ9Y5S2 1711 aa21.21■□□□□ 0.99
DNMT3A-214ENST00000491288 DIP2CQ9Y2E4 1556 aa21.2■□□□□ 0.98
DNMT3A-214ENST00000491288 ABCC1P33527 1531 aa21.19■□□□□ 0.98
DNMT3A-214ENST00000491288 PREX2Q70Z35 1606 aa21.19■□□□□ 0.98
DNMT3A-214ENST00000491288 FER1L4A9Z1Z3 1794 aa21.18■□□□□ 0.98
DNMT3A-214ENST00000491288 AGLP35573 1532 aa21.18■□□□□ 0.98
DNMT3A-214ENST00000491288 CEBPAP49715 358 aaPredicted RBP21.16■□□□□ 0.98
DNMT3A-214ENST00000491288 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
DNMT3A-214ENST00000491288 GPATCH8Q9UKJ3 1502 aaKnown RBP21.14■□□□□ 0.98
DNMT3A-214ENST00000491288 ABCA6Q8N139 1617 aa21.13■□□□□ 0.97
DNMT3A-214ENST00000491288 MYT1LQ9UL68 1186 aa21.1■□□□□ 0.97
DNMT3A-214ENST00000491288 ITSN2Q9NZM3 1697 aa21.09■□□□□ 0.97
DNMT3A-214ENST00000491288 KIAA1107Q9UPP5 1409 aa21.09■□□□□ 0.97
DNMT3A-214ENST00000491288 TIAM1Q13009 1591 aa21.09■□□□□ 0.97
DNMT3A-214ENST00000491288 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
DNMT3A-214ENST00000491288 MAP3K1Q13233 1512 aa21.09■□□□□ 0.97
DNMT3A-214ENST00000491288 KIDINS220Q9ULH0 1771 aa21.08■□□□□ 0.96
DNMT3A-214ENST00000491288 SAMD9LQ8IVG5 1584 aa21.07■□□□□ 0.96
DNMT3A-214ENST00000491288 PREX1Q8TCU6 1659 aa21.07■□□□□ 0.96
DNMT3A-214ENST00000491288 EHBP1L1Q8N3D4 1523 aa21.07■□□□□ 0.96
DNMT3A-214ENST00000491288 CCNB3Q8WWL7 1395 aa21.07■□□□□ 0.96
DNMT3A-214ENST00000491288 UHRF1BP1Q6BDS2 1440 aa21.05■□□□□ 0.96
DNMT3A-214ENST00000491288 CERKQ8TCT0 537 aa21.04■□□□□ 0.96
DNMT3A-214ENST00000491288 CFDP1Q9UEE9 299 aaPredicted RBP21.04■□□□□ 0.96
DNMT3A-214ENST00000491288 ZNF777Q9ULD5 760 aaPredicted RBP21.04■□□□□ 0.96
DNMT3A-214ENST00000491288 CNTLNQ9NXG0 1405 aa21.04■□□□□ 0.96
DNMT3A-214ENST00000491288 LRRC9Q6ZRR7 1453 aa21.03■□□□□ 0.96
DNMT3A-214ENST00000491288 HNRNPMP52272 730 aaKnown RBP eCLIP21.03■□□□□ 0.96
DNMT3A-214ENST00000491288 KANK4Q5T7N3 995 aaPredicted RBP21.03■□□□□ 0.96
DNMT3A-214ENST00000491288 SPAG9O60271 1321 aaKnown RBP21.03■□□□□ 0.96
DNMT3A-214ENST00000491288 PLEKHH2Q8IVE3 1493 aa21.02■□□□□ 0.96
DNMT3A-214ENST00000491288 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
DNMT3A-214ENST00000491288 SYCP2Q9BX26 1530 aa21.02■□□□□ 0.96
DNMT3A-214ENST00000491288 SETD1BQ9UPS6 1966 aaKnown RBP21.01■□□□□ 0.95
DNMT3A-214ENST00000491288 SUPT6HQ7KZ85 1726 aaKnown RBP21■□□□□ 0.95
DNMT3A-214ENST00000491288 ESF1Q9H501 851 aaKnown RBP20.98■□□□□ 0.95
DNMT3A-214ENST00000491288 C3P01024 1663 aa20.98■□□□□ 0.95
DNMT3A-214ENST00000491288 NCOA2Q15596 1464 aa20.97■□□□□ 0.95
DNMT3A-214ENST00000491288 NPATQ14207 1427 aa20.96■□□□□ 0.95
DNMT3A-214ENST00000491288 STRCQ7RTU9 1775 aa20.96■□□□□ 0.95
DNMT3A-214ENST00000491288 PLXNC1O60486 1568 aa20.96■□□□□ 0.95
DNMT3A-214ENST00000491288 PTPRTO14522 1441 aa20.95■□□□□ 0.95
DNMT3A-214ENST00000491288 MBD5Q9P267 1494 aa20.95■□□□□ 0.94
DNMT3A-214ENST00000491288 ATP7AQ04656 1500 aa20.95■□□□□ 0.94
DNMT3A-214ENST00000491288 INO80Q9ULG1 1556 aaPredicted RBP20.95■□□□□ 0.94
DNMT3A-214ENST00000491288 ZMYM3Q14202 1370 aa20.95■□□□□ 0.94
DNMT3A-214ENST00000491288 A2MP01023 1474 aa20.94■□□□□ 0.94
DNMT3A-214ENST00000491288 ZNF644Q9H582 1327 aaPredicted RBP20.92■□□□□ 0.94
DNMT3A-214ENST00000491288 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
DNMT3A-214ENST00000491288 RTEL1-TNFRSF6BF6WH68 1400 aa20.9■□□□□ 0.94
DNMT3A-214ENST00000491288 NCOA1Q15788 1441 aa20.9■□□□□ 0.94
DNMT3A-214ENST00000491288 MROH2AA6NES4 1674 aa20.89■□□□□ 0.94
DNMT3A-214ENST00000491288 PTPRKQ15262 1439 aa20.86■□□□□ 0.93
DNMT3A-214ENST00000491288 RSPH4AQ5TD94 716 aa20.84■□□□□ 0.93
DNMT3A-214ENST00000491288 DHX29Q7Z478 1369 aaKnown RBP20.84■□□□□ 0.93
DNMT3A-214ENST00000491288 GGT6Q6P531 493 aa20.83■□□□□ 0.93
DNMT3A-214ENST00000491288 PPARGC1BQ86YN6 1023 aaKnown RBP20.83■□□□□ 0.93
DNMT3A-214ENST00000491288 MYOM3Q5VTT5 1437 aa20.83■□□□□ 0.93
DNMT3A-214ENST00000491288 LTBP4Q8N2S1 1624 aa20.82■□□□□ 0.92
DNMT3A-214ENST00000491288 MIA2Q96PC5 1412 aa20.8■□□□□ 0.92
DNMT3A-214ENST00000491288 PLA2R1Q13018 1463 aa20.79■□□□□ 0.92
DNMT3A-214ENST00000491288 ADGBQ8N7X0 1667 aa20.79■□□□□ 0.92
DNMT3A-214ENST00000491288 CAMSAP1Q5T5Y3 1602 aa20.78■□□□□ 0.92
DNMT3A-214ENST00000491288 TSPY4P0CV99 314 aa20.78■□□□□ 0.92
DNMT3A-214ENST00000491288 TSPY10P0CW01 314 aa20.78■□□□□ 0.92
DNMT3A-214ENST00000491288 CLTCQ00610 1675 aaKnown RBP20.77■□□□□ 0.92
DNMT3A-214ENST00000491288 IQSEC2Q5JU85 1478 aa20.77■□□□□ 0.92
DNMT3A-214ENST00000491288 CCDC141Q6ZP82 1450 aa20.77■□□□□ 0.92
DNMT3A-214ENST00000491288 TCOF1Q13428 1488 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms