RNA–Protein interactions for RNA: ENST00000491160.1

PBX3-208, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-208ENST00000491160 ATXN8OSP0DMR3 200 aa11.27□□□□□ -0.61
PBX3-208ENST00000491160 PTPRMP28827 1452 aa11.25□□□□□ -0.61
PBX3-208ENST00000491160 HAX1O00165 279 aa11.25□□□□□ -0.61
PBX3-208ENST00000491160 RAPGEF3O95398 923 aa11.25□□□□□ -0.61
PBX3-208ENST00000491160 ARAP3Q8WWN8 1544 aa11.25□□□□□ -0.61
PBX3-208ENST00000491160 ADAMTSL3P82987 1691 aa11.24□□□□□ -0.61
PBX3-208ENST00000491160 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
PBX3-208ENST00000491160 P3H3Q8IVL6 736 aa11.24□□□□□ -0.61
PBX3-208ENST00000491160 GOLGA3Q08378 1498 aa11.24□□□□□ -0.61
PBX3-208ENST00000491160 ARID4BQ4LE39 1312 aaPredicted RBP11.22□□□□□ -0.61
PBX3-208ENST00000491160 ATP10BO94823 1461 aa11.2□□□□□ -0.62
PBX3-208ENST00000491160 MADDQ8WXG6 1647 aa11.2□□□□□ -0.62
PBX3-208ENST00000491160 BCORL1Q5H9F3 1711 aa11.19□□□□□ -0.62
PBX3-208ENST00000491160 SPDYE2BA6NHP3 402 aa11.19□□□□□ -0.62
PBX3-208ENST00000491160 SPDYE6P0CI01 402 aa11.19□□□□□ -0.62
PBX3-208ENST00000491160 SPDYE2Q495Y8 402 aa11.19□□□□□ -0.62
PBX3-208ENST00000491160 ABCA9Q8IUA7 1624 aa11.18□□□□□ -0.62
PBX3-208ENST00000491160 HSPA2P54652 639 aa11.18□□□□□ -0.62
PBX3-208ENST00000491160 PCF11O94913 1555 aaKnown RBP11.18□□□□□ -0.62
PBX3-208ENST00000491160 LMTK3Q96Q04 1460 aa11.18□□□□□ -0.62
PBX3-208ENST00000491160 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
PBX3-208ENST00000491160 FRMPD1Q5SYB0 1578 aa11.16□□□□□ -0.62
PBX3-208ENST00000491160 PHLDB1Q86UU1 1377 aa11.16□□□□□ -0.62
PBX3-208ENST00000491160 FAM9AQ8IZU1 332 aaPredicted RBP11.15□□□□□ -0.62
PBX3-208ENST00000491160 NEO1Q92859 1461 aa11.14□□□□□ -0.63
PBX3-208ENST00000491160 PRXQ9BXM0 1461 aa11.14□□□□□ -0.63
PBX3-208ENST00000491160 ZBTB22O15209 634 aa11.14□□□□□ -0.63
PBX3-208ENST00000491160 RANGAP1P46060 587 aaPredicted RBP11.12□□□□□ -0.63
PBX3-208ENST00000491160 RAPGEF6Q8TEU7 1601 aa11.11□□□□□ -0.63
PBX3-208ENST00000491160 CERKQ8TCT0 537 aa11.1□□□□□ -0.63
PBX3-208ENST00000491160 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
PBX3-208ENST00000491160 SIGLEC1Q9BZZ2 1709 aa11.09□□□□□ -0.63
PBX3-208ENST00000491160 MLECQ14165 292 aa11.09□□□□□ -0.63
PBX3-208ENST00000491160 ARHGEF40Q8TER5 1519 aa11.09□□□□□ -0.63
PBX3-208ENST00000491160 SAMD9Q5K651 1589 aa11.08□□□□□ -0.64
PBX3-208ENST00000491160 DENND4BO75064 1496 aaPredicted RBP11.08□□□□□ -0.64
PBX3-208ENST00000491160 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
PBX3-208ENST00000491160 NUP153P49790 1475 aaKnown RBP11.07□□□□□ -0.64
PBX3-208ENST00000491160 ILDR2Q71H61 639 aa11.07□□□□□ -0.64
PBX3-208ENST00000491160 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
PBX3-208ENST00000491160 YEATS2Q9ULM3 1422 aa11.06□□□□□ -0.64
PBX3-208ENST00000491160 PLEKHD1A6NEE1 506 aa11.05□□□□□ -0.64
PBX3-208ENST00000491160 FHOD3Q2V2M9 1422 aa11.05□□□□□ -0.64
PBX3-208ENST00000491160 FANCAO15360 1455 aa11.05□□□□□ -0.64
PBX3-208ENST00000491160 POGZQ7Z3K3 1410 aa11.04□□□□□ -0.64
PBX3-208ENST00000491160 FER1L4A9Z1Z3 1794 aa11.04□□□□□ -0.64
PBX3-208ENST00000491160 ZFYVE16Q7Z3T8 1539 aa11.04□□□□□ -0.64
PBX3-208ENST00000491160 DISP3Q9P2K9 1392 aa11.03□□□□□ -0.64
PBX3-208ENST00000491160 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.03□□□□□ -0.64
PBX3-208ENST00000491160 TTC37Q6PGP7 1564 aa11.03□□□□□ -0.64
PBX3-208ENST00000491160 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.65
PBX3-208ENST00000491160 CSRNP3Q8WYN3 585 aa11.02□□□□□ -0.65
PBX3-208ENST00000491160 HECW1Q76N89 1606 aa11.02□□□□□ -0.65
PBX3-208ENST00000491160 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
PBX3-208ENST00000491160 CFAP74Q9C0B2 1584 aa11.01□□□□□ -0.65
PBX3-208ENST00000491160 EFCAB5A4FU69 1503 aa11□□□□□ -0.65
PBX3-208ENST00000491160 ZMYM4Q5VZL5 1548 aa11□□□□□ -0.65
PBX3-208ENST00000491160 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
PBX3-208ENST00000491160 SOCS7O14512 581 aa10.99□□□□□ -0.65
PBX3-208ENST00000491160 PREX1Q8TCU6 1659 aa10.98□□□□□ -0.65
PBX3-208ENST00000491160 STRCQ7RTU9 1775 aa10.98□□□□□ -0.65
PBX3-208ENST00000491160 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
PBX3-208ENST00000491160 SCAPERQ9BY12 1400 aa10.98□□□□□ -0.65
PBX3-208ENST00000491160 MAGI2Q86UL8 1455 aa10.98□□□□□ -0.65
PBX3-208ENST00000491160 CDK13Q14004 1512 aaKnown RBP10.96□□□□□ -0.65
PBX3-208ENST00000491160 ARHGEF12Q9NZN5 1544 aa10.96□□□□□ -0.65
PBX3-208ENST00000491160 ATP10AO60312 1499 aa10.95□□□□□ -0.66
PBX3-208ENST00000491160 SSUH2Q9Y2M2 353 aa10.95□□□□□ -0.66
PBX3-208ENST00000491160 PLCH2O75038 1416 aa10.94□□□□□ -0.66
PBX3-208ENST00000491160 EVX2Q03828 476 aa10.94□□□□□ -0.66
PBX3-208ENST00000491160 ATP1B4Q9UN42 357 aaPredicted RBP10.94□□□□□ -0.66
PBX3-208ENST00000491160 C9orf84Q5VXU9 1444 aa10.93□□□□□ -0.66
PBX3-208ENST00000491160 SETD1BQ9UPS6 1966 aaKnown RBP10.92□□□□□ -0.66
PBX3-208ENST00000491160 AFAP1Q8N556 730 aa10.92□□□□□ -0.66
PBX3-208ENST00000491160 MYT1LQ9UL68 1186 aa10.92□□□□□ -0.66
PBX3-208ENST00000491160 SPATA31D1Q6ZQQ2 1576 aa10.91□□□□□ -0.66
PBX3-208ENST00000491160 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
PBX3-208ENST00000491160 EFCAB2Q5VUJ9 269 aa10.91□□□□□ -0.66
PBX3-208ENST00000491160 EHMT2Q96KQ7 1210 aa10.91□□□□□ -0.66
PBX3-208ENST00000491160 MYO5CQ9NQX4 1742 aa10.91□□□□□ -0.66
PBX3-208ENST00000491160 UHRF1BP1Q6BDS2 1440 aa10.91□□□□□ -0.66
PBX3-208ENST00000491160 C3P01024 1663 aa10.89□□□□□ -0.67
PBX3-208ENST00000491160 KIF14Q15058 1648 aa10.88□□□□□ -0.67
PBX3-208ENST00000491160 C19orf67A6NJJ6 358 aa10.88□□□□□ -0.67
PBX3-208ENST00000491160 ZNF518AQ6AHZ1 1483 aa10.87□□□□□ -0.67
PBX3-208ENST00000491160 DIP2CQ9Y2E4 1556 aa10.86□□□□□ -0.67
PBX3-208ENST00000491160 PTPRTO14522 1441 aa10.86□□□□□ -0.67
PBX3-208ENST00000491160 ARHGAP5Q13017 1502 aa10.86□□□□□ -0.67
PBX3-208ENST00000491160 LTBP4Q8N2S1 1624 aa10.86□□□□□ -0.67
PBX3-208ENST00000491160 ABCA6Q8N139 1617 aa10.85□□□□□ -0.67
PBX3-208ENST00000491160 ESF1Q9H501 851 aaKnown RBP10.85□□□□□ -0.67
PBX3-208ENST00000491160 KDM5CP41229 1560 aa10.85□□□□□ -0.67
PBX3-208ENST00000491160 CDK11AQ9UQ88 783 aaPredicted RBP10.84□□□□□ -0.67
PBX3-208ENST00000491160 EEA1Q15075 1411 aa10.84□□□□□ -0.67
PBX3-208ENST00000491160 CDC42BPBQ9Y5S2 1711 aa10.83□□□□□ -0.68
PBX3-208ENST00000491160 TRAPPC8Q9Y2L5 1435 aa10.83□□□□□ -0.68
PBX3-208ENST00000491160 LRRIQ1Q96JM4 1722 aa10.82□□□□□ -0.68
PBX3-208ENST00000491160 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
PBX3-208ENST00000491160 UBTFP17480 764 aaKnown RBP10.82□□□□□ -0.68
PBX3-208ENST00000491160 NCOA1Q15788 1441 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms