RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 HECW1Q76N89 1606 aa8.67□□□□□ -1.02
CKAP2-207ENST00000490903 CEBPAP49715 358 aaPredicted RBP8.67□□□□□ -1.02
CKAP2-207ENST00000490903 TROQ12816 1431 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-207ENST00000490903 PTPRMP28827 1452 aa8.66□□□□□ -1.02
CKAP2-207ENST00000490903 ESF1Q9H501 851 aaKnown RBP8.66□□□□□ -1.02
CKAP2-207ENST00000490903 ARHGAP5Q13017 1502 aa8.66□□□□□ -1.02
CKAP2-207ENST00000490903 POGZQ7Z3K3 1410 aa8.65□□□□□ -1.02
CKAP2-207ENST00000490903 PIAS4Q8N2W9 510 aaPredicted RBP8.65□□□□□ -1.03
CKAP2-207ENST00000490903 HNRNPMP52272 730 aaKnown RBP eCLIP8.64□□□□□ -1.03
CKAP2-207ENST00000490903 KIF14Q15058 1648 aa8.64□□□□□ -1.03
CKAP2-207ENST00000490903 FRMPD1Q5SYB0 1578 aa8.64□□□□□ -1.03
CKAP2-207ENST00000490903 CASKIN1Q8WXD9 1431 aa8.63□□□□□ -1.03
CKAP2-207ENST00000490903 CFDP1Q9UEE9 299 aaPredicted RBP8.63□□□□□ -1.03
CKAP2-207ENST00000490903 ZFYVE16Q7Z3T8 1539 aa8.63□□□□□ -1.03
CKAP2-207ENST00000490903 MTUS2Q5JR59 1369 aa8.62□□□□□ -1.03
CKAP2-207ENST00000490903 PPP6R1Q9UPN7 881 aa8.62□□□□□ -1.03
CKAP2-207ENST00000490903 MADDQ8WXG6 1647 aa8.62□□□□□ -1.03
CKAP2-207ENST00000490903 CFAP74Q9C0B2 1584 aa8.61□□□□□ -1.03
CKAP2-207ENST00000490903 PCF11O94913 1555 aaKnown RBP8.61□□□□□ -1.03
CKAP2-207ENST00000490903 RICTORQ6R327 1708 aa8.61□□□□□ -1.03
CKAP2-207ENST00000490903 ATP10AO60312 1499 aa8.6□□□□□ -1.03
CKAP2-207ENST00000490903 ARHGEF40Q8TER5 1519 aa8.6□□□□□ -1.03
CKAP2-207ENST00000490903 TRAPPC8Q9Y2L5 1435 aa8.6□□□□□ -1.03
CKAP2-207ENST00000490903 ADAMTSL3P82987 1691 aa8.6□□□□□ -1.03
CKAP2-207ENST00000490903 RIMS1Q86UR5 1692 aaKnown RBP8.6□□□□□ -1.03
CKAP2-207ENST00000490903 CCDC18Q5T9S5 1454 aa8.59□□□□□ -1.03
CKAP2-207ENST00000490903 BCORL1Q5H9F3 1711 aa8.59□□□□□ -1.03
CKAP2-207ENST00000490903 MYO5CQ9NQX4 1742 aa8.59□□□□□ -1.03
CKAP2-207ENST00000490903 SPAG9O60271 1321 aaKnown RBP8.59□□□□□ -1.03
CKAP2-207ENST00000490903 CCNB3Q8WWL7 1395 aa8.59□□□□□ -1.03
CKAP2-207ENST00000490903 MAGI2Q86UL8 1455 aa8.59□□□□□ -1.03
CKAP2-207ENST00000490903 GGT6Q6P531 493 aa8.59□□□□□ -1.03
CKAP2-207ENST00000490903 ZNF644Q9H582 1327 aaPredicted RBP8.59□□□□□ -1.03
CKAP2-207ENST00000490903 ZNF518AQ6AHZ1 1483 aa8.59□□□□□ -1.04
CKAP2-207ENST00000490903 C9orf84Q5VXU9 1444 aa8.58□□□□□ -1.04
CKAP2-207ENST00000490903 LRRIQ1Q96JM4 1722 aa8.57□□□□□ -1.04
CKAP2-207ENST00000490903 FYCO1Q9BQS8 1478 aa8.57□□□□□ -1.04
CKAP2-207ENST00000490903 CEP162Q5TB80 1403 aa8.57□□□□□ -1.04
CKAP2-207ENST00000490903 ADRA2BP18089 450 aa8.56□□□□□ -1.04
CKAP2-207ENST00000490903 ZMYM4Q5VZL5 1548 aa8.56□□□□□ -1.04
CKAP2-207ENST00000490903 ARHGEF12Q9NZN5 1544 aa8.56□□□□□ -1.04
CKAP2-207ENST00000490903 SIGLEC1Q9BZZ2 1709 aa8.54□□□□□ -1.04
CKAP2-207ENST00000490903 GPATCH8Q9UKJ3 1502 aaKnown RBP8.54□□□□□ -1.04
CKAP2-207ENST00000490903 CDC42BPBQ9Y5S2 1711 aa8.54□□□□□ -1.04
CKAP2-207ENST00000490903 LMTK3Q96Q04 1460 aa8.54□□□□□ -1.04
CKAP2-207ENST00000490903 APLP2Q06481 763 aa8.53□□□□□ -1.04
CKAP2-207ENST00000490903 FBXO41Q8TF61 875 aa8.53□□□□□ -1.04
CKAP2-207ENST00000490903 SYCP2Q9BX26 1530 aa8.52□□□□□ -1.05
CKAP2-207ENST00000490903 FER1L4A9Z1Z3 1794 aa8.52□□□□□ -1.05
CKAP2-207ENST00000490903 MLH3Q9UHC1 1453 aa8.52□□□□□ -1.05
CKAP2-207ENST00000490903 ABCC1P33527 1531 aa8.51□□□□□ -1.05
CKAP2-207ENST00000490903 PREX2Q70Z35 1606 aa8.51□□□□□ -1.05
CKAP2-207ENST00000490903 KIF3BO15066 747 aa8.51□□□□□ -1.05
CKAP2-207ENST00000490903 TSPY4P0CV99 314 aa8.51□□□□□ -1.05
CKAP2-207ENST00000490903 TSPY10P0CW01 314 aa8.51□□□□□ -1.05
CKAP2-207ENST00000490903 DIP2CQ9Y2E4 1556 aa8.5□□□□□ -1.05
CKAP2-207ENST00000490903 CDC42BPAQ5VT25 1732 aa8.5□□□□□ -1.05
CKAP2-207ENST00000490903 UHRF1BP1Q6BDS2 1440 aa8.5□□□□□ -1.05
CKAP2-207ENST00000490903 KANK4Q5T7N3 995 aaPredicted RBP8.5□□□□□ -1.05
CKAP2-207ENST00000490903 KDM5CP41229 1560 aa8.5□□□□□ -1.05
CKAP2-207ENST00000490903 CERKQ8TCT0 537 aa8.49□□□□□ -1.05
CKAP2-207ENST00000490903 SAMD9LQ8IVG5 1584 aa8.49□□□□□ -1.05
CKAP2-207ENST00000490903 ABCA6Q8N139 1617 aa8.49□□□□□ -1.05
CKAP2-207ENST00000490903 DMRT2Q9Y5R5 561 aa8.49□□□□□ -1.05
CKAP2-207ENST00000490903 ZMYM3Q14202 1370 aa8.48□□□□□ -1.05
CKAP2-207ENST00000490903 PLEKHH2Q8IVE3 1493 aa8.48□□□□□ -1.05
CKAP2-207ENST00000490903 ITSN2Q9NZM3 1697 aa8.47□□□□□ -1.05
CKAP2-207ENST00000490903 KIDINS220Q9ULH0 1771 aa8.47□□□□□ -1.05
CKAP2-207ENST00000490903 A2MP01023 1474 aa8.47□□□□□ -1.05
CKAP2-207ENST00000490903 KIAA1107Q9UPP5 1409 aa8.47□□□□□ -1.05
CKAP2-207ENST00000490903 NCKAP5LQ9HCH0 1330 aa8.47□□□□□ -1.05
CKAP2-207ENST00000490903 SUPT6HQ7KZ85 1726 aaKnown RBP8.47□□□□□ -1.05
CKAP2-207ENST00000490903 WASHC2CQ9Y4E1 1318 aa8.46□□□□□ -1.05
CKAP2-207ENST00000490903 POTEDQ86YR6 584 aa8.46□□□□□ -1.05
CKAP2-207ENST00000490903 NCOA2Q15596 1464 aa8.46□□□□□ -1.05
CKAP2-207ENST00000490903 SETD1BQ9UPS6 1966 aaKnown RBP8.46□□□□□ -1.06
CKAP2-207ENST00000490903 FBXO31Q5XUX0 539 aaPredicted RBP8.46□□□□□ -1.06
CKAP2-207ENST00000490903 ATP7AQ04656 1500 aa8.46□□□□□ -1.06
CKAP2-207ENST00000490903 EHBP1L1Q8N3D4 1523 aa8.46□□□□□ -1.06
CKAP2-207ENST00000490903 VPS8Q8N3P4 1428 aa8.45□□□□□ -1.06
CKAP2-207ENST00000490903 CNTLNQ9NXG0 1405 aa8.44□□□□□ -1.06
CKAP2-207ENST00000490903 TIAM1Q13009 1591 aa8.44□□□□□ -1.06
CKAP2-207ENST00000490903 RSPH4AQ5TD94 716 aa8.44□□□□□ -1.06
CKAP2-207ENST00000490903 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.44□□□□□ -1.063e-7■■■■■ 27.3
CKAP2-207ENST00000490903 CHIC2Q9UKJ5 165 aa8.44□□□□□ -1.06
CKAP2-207ENST00000490903 AGLP35573 1532 aa8.44□□□□□ -1.06
CKAP2-207ENST00000490903 MBD5Q9P267 1494 aa8.43□□□□□ -1.06
CKAP2-207ENST00000490903 DHX29Q7Z478 1369 aaKnown RBP8.43□□□□□ -1.06
CKAP2-207ENST00000490903 RRP7BPQ9NSQ0 103 aa8.42□□□□□ -1.06
CKAP2-207ENST00000490903 PPARGC1BQ86YN6 1023 aaKnown RBP8.42□□□□□ -1.06
CKAP2-207ENST00000490903 C3P01024 1663 aa8.42□□□□□ -1.06
CKAP2-207ENST00000490903 CAMSAP2Q08AD1 1489 aa8.42□□□□□ -1.06
CKAP2-207ENST00000490903 PREX1Q8TCU6 1659 aa8.42□□□□□ -1.06
CKAP2-207ENST00000490903 LRRC9Q6ZRR7 1453 aa8.42□□□□□ -1.06
CKAP2-207ENST00000490903 CCDC141Q6ZP82 1450 aa8.41□□□□□ -1.06
CKAP2-207ENST00000490903 REREQ9P2R6 1566 aa8.41□□□□□ -1.06
CKAP2-207ENST00000490903 FAM50AQ14320 339 aaKnown RBP8.41□□□□□ -1.06
CKAP2-207ENST00000490903 SCAF1Q9H7N4 1312 aaKnown RBP8.4□□□□□ -1.06
CKAP2-207ENST00000490903 ZNF335Q9H4Z2 1342 aaPredicted RBP8.4□□□□□ -1.06
CKAP2-207ENST00000490903 CLTCQ00610 1675 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms